Dendronephthya gigantea (soft corals): 114516074
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Entry
114516074 CDS
T06112
Name
(RefSeq) tRNA pseudouridine synthase A-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dgt03016
]
114516074
Enzymes [BR:
dgt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
114516074
Transfer RNA biogenesis [BR:
dgt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
114516074
Prokaryotic type
114516074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
114516074
NCBI-ProteinID:
XP_028391240
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MECGAQMENNNSASEEQENENSLKRSIDEVEDCATNSSEKKIDVKLESAAEISVSSVEQA
KCPSEMEINETTESKDAESKIEWESEKSIKRSIDEVEDCATNPSEKKMDLKLESAYTAET
SVSSVEQVKCPSEVIETRESKDAESKIDYRRKRKCVLLLSYCGKGYNGMQRNPGVRTIEE
DLTNALLKARAISEDASRNYSIMSFQRCARTDKGVSAARQVVSLKMVPYKELIPEINKHL
EPQIRVFALKQVTRGFDCKSRCSSRTYKYILPTFAFAPSYAHTTKYFRMTDEILEELNLV
LKTYEGTKNFHNFTSGKDFKEESAKRYIIQFNVDGTPLVEGDMEFLVLKVQGQSFMQHQI
RKMIGLVIAIMKKFTDVGALQRAFLQPKMDVPRAPGLGLILDQVYFNSYNERFGHDGLHE
PLEWSECEDKIEEFRKKYIYNDIIKTETATNSMMKWLGTLKLHTFNSDRMTELTKSEENK
TAETVKT
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtggagcacaaatggagaacaataatagtgcaagtgaagaacaagagaatgag
aacagtttgaaaagatctattgatgaggttgaggattgtgcaacaaactctagtgaaaaa
aagatagatgtaaagttagaatcagcagcagagataagcgtcagttctgtagaacaagca
aagtgtcccagtgaaatggaaataaatgaaactacagagagtaaagatgctgaatcaaaa
atagaatgggagagtgagaagagtataaaaagatctattgatgaagttgaggattgtgca
acaaaccctagtgaaaaaaaaatggatctaaagttggaatcagcatacactgcagagaca
agcgtcagttctgtagaacaagtgaagtgtcccagtgaagtaattgagactagagagagt
aaagatgctgaatcaaagatagattatagaagaaaaaggaaatgtgtgctactattgtcg
tattgtgggaagggttacaatggcatgcaaagaaatcctggagtaagaacaattgaggag
gacctaaccaatgcattgcttaaagccagagcaatttcagaggatgcatcaagaaattat
tcaattatgtcgttccaaagatgtgcaagaactgacaaaggtgtttcagcagcgcgtcaa
gttgtttctttaaagatggttccctacaaagagctaattcctgaaatcaacaaacatttg
gaaccacagatacgggtatttgctttgaaacaagtaacgcgtggcttcgattgtaaaagc
agatgttcatccaggacatacaagtacattttgccgacatttgcgtttgcaccaagttat
gctcatacaacaaagtattttaggatgacagatgagatcctagaggaactgaatttggta
ctgaagacttatgaaggcacaaaaaactttcataactttacatcaggaaaggatttcaag
gaggaaagtgccaaaagatacataattcagttcaatgtggatggtacaccattagtggaa
ggtgacatggagtttttagtccttaaagttcaaggacaaagcttcatgcaacaccaaatt
aggaaaatgataggtttggttattgcgataatgaagaaattcactgacgtgggtgcttta
caaagggcattcctgcagccaaagatggacgttccaagagctcctggccttgggcttatt
ttagatcaggtttatttcaacagttacaatgaaaggtttggacatgatggtcttcatgaa
ccattagaatggagtgagtgtgaggacaaaattgaggaattccgaaagaagtatatttat
aatgatattataaagacagaaacagccactaattcaatgatgaaatggttaggcacactg
aagcttcatacattcaacagcgacagaatgacggaactgacaaaatcagaagaaaacaaa
acagcagagacagtgaaaacttaa
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