Dendronephthya gigantea (soft corals): 114516209
Help
Entry
114516209 CDS
T06112
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04140
Autophagy - animal
dgt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114516209
04148 Efferocytosis
114516209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dgt04131
]
114516209
Membrane trafficking [BR:
dgt04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114516209
Hops complex
114516209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
CNOT1_HEAT
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
114516209
NCBI-ProteinID:
XP_028391423
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MGHVTADWTPLGDVFYRTIELYDMAWKGEIDITKYHIAAAPYGGPIALSKKHMRMSGAKP
LISIYSAAGRLMADINWEGGNLVQMGWSVSEDLFCVAEDGRIYVYTLSGDFIKVMTTGQE
GKEFKVIDCRFFSSSMGSGITILTSRYHFYTINKLEDKKTRELATPPGLNAPPSSWITIP
EERKSHVLVAVESFLYSVTSEDVVLLTPEISEQVNAFTEMALSINHKYLALYADTGLVWI
GSSDLKTVYCEFNTRQTSRPEQLAWCGNGAVICYWQYQYMMIGPDKDVDTRFIEDDVYLV
PEIDGIRIVSNEKHEFLQKVPSVVENVFKIGSVESGAMLYEAMKEFEKKSAKADEYIRLI
KPKLPEAVRQCVQAAGSEFEPTLQRSLLRAASFGKSFVDELETHKKYVEMCQILRVLNAV
REHTVGVPLTLVQLDTLSMDVLIKRLMLRRQYCLAMRISNYLKIPKSDGESRILAHWACY
KVQQMNKDEENIALAIATKLGDAPGISYTAVASQAVKCGRGQLALRLLEYESKAADQVPL
LIRMKNNQLALEKAIESGDTDLVYLVVMDLKEEKQLKEFLMTLRHFPVAFSLFVKFCKEQ
DKKTLENLYTIDDQFLNLGNLYLHDSFTKTTSDERRECLKKSLGYFTQGNLLFPKQMVEE
QIKLLEKQKSLEEKLRLPGLYGLSVSDTISQCVHKGHYNEAEQLKKEFKVPDKRYYWLKL
RALAKAREWMKLEEFSKSKKSPIGYEPFFEACFQFDNIKEAEKYISRVPLEERMNCYIRV
GNIEQAANVAFNQKNEEALNSLLGRCGTNRTLVSKIETMKTQLSQRKK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatgtgacagcagattggacacctcttggtgatgtattttacaggacaattgaa
ttgtatgatatggcttggaaaggtgaaattgacattacaaaatatcatattgctgcagca
ccttatggtggaccaatagctctttcaaagaaacacatgagaatgtccggggcaaaacct
cttatctctatatattctgcagctggaagattaatggcagatataaactgggaaggagga
aaccttgttcaaatgggatggtctgtaagtgaagacttgttctgtgttgctgaagatgga
agaatatatgtctatactctttctggggactttataaaagtgatgacaacaggacaggag
ggaaaggagtttaaagtgattgattgtagattcttctccagttcaatgggatctggtatt
accatcttaactagtcgctaccatttttatacaataaacaagttggaagataaaaaaaca
cgggagttagctactcctccaggtttaaatgctccaccaagcagctggattaccattcca
gaagaaagaaaatctcatgtgttggttgctgtggagagttttctttactccgttacaagt
gaagatgttgttttattaacgccagaaatcagcgagcaagtaaatgcattcacagagatg
gctctctcgataaaccataaatatttagcactgtatgcggacactggtctagtgtggatt
ggatcttcggatttgaaaacggtttattgtgagtttaatactcgacaaacatcccgtcct
gagcaactagcatggtgtggaaatggtgctgtgatatgttactggcaatatcaatatatg
atgattggacctgataaagatgtcgacactcgttttatcgaagacgatgtttatctggtg
cctgaaatagatggtataagaattgtgagtaacgagaaacacgagttccttcaaaaagtt
ccaagtgttgttgaaaatgtttttaaaatcggttctgtggagtctggagccatgttgtat
gaagcaatgaaagaattcgagaaaaagagcgctaaagcggatgaatatattcgtttaata
aaacccaagttaccagaagcagtcagacagtgtgtgcaagccgcgggttcggaatttgag
ccaacattacaaagaagtttattaagagcggcatcattcggaaagagtttcgttgatgaa
ctagaaactcataagaaatatgtggaaatgtgtcaaatattaagagttttgaatgctgtt
agagaacatactgtaggcgtgcctttaaccttagtgcaactggacactttgtcaatggat
gtgcttattaaaagattaatgcttcgacgtcaatattgtttggcaatgcgaattagtaat
tatttgaaaattccaaaaagtgacggcgaaagtagaattctggcacattgggcatgctat
aaggtgcaacaaatgaacaaagatgaggaaaatattgctcttgccattgcaaccaaactc
ggagacgcacctggtatttcatacactgcagttgcatcgcaagctgttaaatgtggtcga
ggtcagcttgctctcaggcttttagaatatgaatcaaaagcagcagaccaagttccgtta
ctaatcaggatgaaaaacaaccagctcgctttggagaaagcaatagaaagtggagatacc
gacttagtgtatttggttgtgatggaccttaaagaagaaaaacaactaaaagaatttttg
atgactttaaggcattttccagttgctttcagtctttttgtaaagttttgtaaagaacag
gataaaaaaacgttggaaaatctctacacgatagatgaccagtttcttaacctgggcaat
ctttacttgcacgatagcttcactaagactacatcagatgagagaagagaatgtttgaaa
aaatctttgggatattttacccaaggcaacctactctttccaaaacagatggtggaagaa
caaattaagctactagagaaacagaaatcgctggaagaaaagttgagacttccaggacta
tatgggttatcagttagtgacaccatatctcagtgtgttcacaaaggtcattacaacgaa
gcagaacaattaaagaaagaatttaaagttcctgataaaagatattattggctgaagctt
cgagcacttgctaaagcccgtgaatggatgaaactggaagaatttagtaaaagtaaaaag
tctcccataggttacgagccgttctttgaggcgtgttttcaatttgataacatcaaggaa
gctgaaaaatatatttctcgcgttccccttgaggaaagaatgaattgttacatcagagtt
ggaaatattgaacaagcggcaaatgttgcattcaatcagaaaaatgaagaagctttgaac
agtttgttggggcgttgtggaacaaatagaacactcgtctctaaaattgaaacaatgaaa
actcaactttcacaaagaaaaaaatga
DBGET
integrated database retrieval system
