Dendronephthya gigantea (soft corals): 114516443
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Entry
114516443 CDS
T06112
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 homolog isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dgt04040
]
114516443
Ion channels [BR:
dgt04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114516443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_3
Ank
Ank_4
Ank_5
Ion_trans
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
114516443
NCBI-ProteinID:
XP_028391724
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MSCTRGVVDERLKIRCCNIATAIYLDDDPNLRTFLKLQKDTTDGMKNTLGERSPLLENIK
EPQFRIEDIQRRILEAVELNSLSCLHALCEIYQNNPISNKAEDIHLFHRRYGLSFWPLSE
RPKETALHLIANKHSSIKAMKVLQERPQFLNDFSDIPDSHGSSPLLLAIKRNNMEVVKVL
LDREPDVNKRNKHNESPILVAALNDHADVIKEMLEKSNLDETKLLEVMKNIDGNGHSILY
PASQSGKPKVLNLIMEQRWWQECFDQEVNKTEEWESFVGNVCASGCYELARICLQHNNNT
TPNEKGDEGAISVTPLMRAVEANQGEIVKLIIDRSRGYDPFMICDEHGKNVFHYAVKNPD
ILRYLLEKLKELGNNTEVINIMDEWENTPIKLAAVGDIEESFEMLLEHTTNKADLFAAHL
IDSVDIELLKKGLVDWKRKDPKAVADLLNGEHEKHQPFLEAAKKGKVELLQFFWDEGANY
SQRTPEDQTVLHYAVLSGELAVVEFLLEKNEFLEMIDFTDEINISAAGYATKLGKAEILR
YMLEKGAQIKSDTKTARLNILDCAYGHFETAEESIKEIIEFCTTQKKVKYKKTQLLKELF
EDTYFGADRIMAQLIEKTPEVAMMIFDLCVQEQKYHSHRSYGEMKVERRMIYLFFPFKRK
NPKDNAKDKGQADGKLEAIESMVDNERDDCLGHPLVLKFLNYKMHSKGVKKWFYFNVFFY
LIFLLSLTVYSTLQSQGLYDLKSPGMISLSVIILAFCAFHFIKEIFQFGLYAASYTKDFE
NYIEWVIFICAVIYVVPGGSTKTKVQITAGVISVFLGWINFSFFLKRFSLFGIYVIMAKR
VFRTVCQVLPFVLLFIVAFSLSFSLLIRLDKGFKNIPISILTTFVMMTGELDYRDIFLQS
GPFHVLQKIVLVLFILTITVTVMNLLTGLAVGDINDIMARSKEEKRISKASLVITLERNL
HNIPFLPSPEFEDDVEDPPKDECQPSWLTLHWNKIFEDDEIEEQLKAMAKKKKKGFGKQL
KNEMKDRLQNIEALLEKLQAGSKDASSS
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtacacggggtgtagtagatgagagattaaagatcagatgctgtaacattgca
acagcaatatatcttgacgatgatcccaacttaaggacttttcttaagcttcaaaaagac
accacagacggaatgaagaatactttaggggaaagatctccgttgctcgagaatataaaa
gaaccacagttccgaatcgaggatattcaacgtcgtatactagaagctgtggagctgaac
agtttgagttgtttacatgcgctttgcgagatttatcaaaataatcccatttcaaataaa
gccgaagatatccatctgttccaccgccgctatggtttatctttctggccattgagcgaa
cgtccaaaagagactgctcttcaccttattgcgaacaaacattcttcaatcaaagcgatg
aaggttttacaagaacgaccgcaattcctgaacgatttttcagacattccggacagtcat
ggatcatcaccactgcttttggcgataaagcgtaacaatatggaggtggtgaaggtattg
ctggatagggaaccagacgtgaacaagcgaaataaacataatgaatcgcctattcttgta
gctgccttaaatgaccatgcagatgttataaaagaaatgctggagaaatcaaatctagat
gaaactaaacttcttgaggttatgaaaaacattgatggaaacggccattctattctttat
cctgcctctcaaagtggaaaaccaaaggttcttaatctcattatggagcaacgttggtgg
caggaatgtttcgaccaggaggttaataagactgaagaatgggagtcattcgttggcaac
gtttgtgcgtcaggatgttacgaactggcaagaatatgcttacaacacaataataatact
accccgaatgagaaaggagatgaaggtgcaatttcagttacccctcttatgagagcggtc
gaagcaaaccaaggtgaaattgtcaaacttattattgaccgttcacggggctatgatcct
tttatgatttgtgacgaacatggtaaaaatgtcttccactacgctgtgaagaaccctgat
attctacgttatcttcttgaaaagcttaaagagctcggaaataataccgaggttattaat
ataatggacgagtgggaaaacacaccaatcaagcttgcagcagttggagatatagaggag
agcttcgaaatgctcttagaacacactacaaataaagctgatctattcgctgcccatctg
attgatagtgtggatatagagcttctaaagaaaggtcttgtcgactggaaaagaaaagat
cccaaagcagtagctgatctgctgaatggcgagcacgagaaacatcagccgttcttagag
gccgctaagaaaggaaaagtcgagttactacaatttttctgggatgaaggagcgaattat
tcacaaagaactccagaagatcaaactgttcttcattatgctgtgctttccggggagctg
gctgtcgtggaatttctgctggaaaaaaacgagttcctagaaatgatcgatttcaccgat
gagataaacattagtgcagctggttatgccacaaagctcggaaaggcggagatattaaga
tatatgttggagaaaggtgcgcaaataaaaagcgacacgaagacggccagactcaacatc
ttggattgtgcgtatggacattttgaaactgccgaggaatctatcaaagaaattatcgag
ttttgtacaacacaaaaaaaagtaaaatataaaaaaacacaattacttaaagagttgttc
gaagacacgtattttggtgctgatcgtattatggcacaactgattgaaaaaacacctgaa
gtcgccatgatgatttttgacctgtgtgttcaggaacaaaaatatcatagccaccgttct
tatggcgaaatgaaagtggaaagaagaatgatatacttgttctttccattcaaacggaaa
aatcctaaagacaatgctaaagacaaaggccaagcggatggaaagcttgaagcaattgaa
agcatggttgacaatgaaagagacgactgtttgggccatccacttgttctaaagtttctt
aactacaagatgcattcaaagggtgttaaaaaatggttctatttcaatgtttttttctac
ctcatattcctgctcagtttaacagtatatagcactcttcaaagtcaaggactatacgac
ttaaaatcaccaggaatgatttcattatcggttattattttggccttttgtgcatttcat
ttcatcaaagaaatatttcagttcggtttatatgctgctagttatactaaagacttcgaa
aattacatcgaatgggtgatattcatctgcgctgtcatttatgtggtgcctggaggaagt
acgaagacgaaagtacagattacggctggagttatttcggtgtttctcggatggataaac
ttctcttttttcctgaaaagattttcattgtttgggatctacgtcataatggctaaaaga
gtttttcgtaccgtctgccaggtgttaccattcgtcttgttgttcatcgttgcgttctcg
ctgtcattttcgctgctaattcgtctagataaaggtttcaaaaatattccaatttctatt
ctcacaacattcgtcatgatgactggagagttggactatcgggatatctttctacaaagc
ggaccatttcacgttttgcaaaagatagttcttgtgttatttattcttacgatcaccgtc
accgtgatgaatttgctgactggtcttgctgttggggatattaatgacatcatggctcgt
tcgaaagaagaaaaaagaatttctaaggcgagtcttgtcattacattagaaagaaattta
cacaatattccattcctcccatcgcctgaatttgaagacgacgttgaagacccgccaaag
gatgaatgtcaaccatcgtggctaacactccattggaataagatatttgaagatgatgaa
attgaggaacaattaaaagcaatggctaagaaaaagaaaaagggttttggaaaacagttg
aagaatgagatgaaggatagattacagaatattgaagcactgttggagaagcttcaagca
gggagtaaagatgcttccagcagttga
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