Dendronephthya gigantea (soft corals): 114516496
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Entry
114516496 CDS
T06112
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dgt04040
]
114516496
Ion channels [BR:
dgt04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114516496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_3
Ank
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
114516496
NCBI-ProteinID:
XP_028391795
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MLYDFECQQHNIFRRVKLTMEESTSGANKITEDDINGNGNTTVRKSEKTQDDTHDRREIV
SEAEQEMRNRRLDAITVKTTTRSCAALEVAAGVEKNKVFPIKAERVFAYESDSRLETPEK
SPAEVELSQRPIVRLDEFILSAAAKKEEERPFPVQKGPTPRYLWDDFGEDFDAQQALSDA
ANIEEKRPFIVRQESVEETEKERIPLMKNNEKTGYNQKLLTMRTRNTNMVYTLYLTHSEQ
TQNAQSEFMQKKTPESSSPSKTSLRKGISYSEDKSKIALIRKAEEKFFTSSTSGHKVDEK
TVMRYCDIATAIYLDDDLNLSRFLTNELKHSEEIQRRILEAVELNSLKCLLVLCDTYEKL
PSTTEEDVHLFHRRYGLSSWPLNERPKESAVHLVANKLTSIKAMKVLEKHPRFLDEFSDI
PDSHGSSPLLLAIKCNNMEVVKRLLARKPDLNKRNKHNETPILVAALNDDADVIKEMLEI
YPETELLEIMRNIDGKGHSILYPASQSGKPEVLNLIMKRGWWPDFLDQEKKMFEKWESFV
CNVCSTGCKELAETIFKQNPKLLEPEGDKFTPLMSAAKANQLEIVQLIFEFRADYSLFMT
CDGKGRNVFHYSVENPDILRYLLEQYEKVSIDKHDVNKMDNLENTPIKLAAVRKLKESFK
ILLQFTTSEADIFSAHLIHNVDFEVLKMGLLIWKEKDPEAVACLLNGDHKQHQPFLEAAK
KGNIQLMQFFLEQGANHSQRTPNDQTAIHYAVLSGKLAAVQFLLKKEEFLEMINFTDDVN
ITAAGYATQSGNVEILRYLLDNNAKMKSDTKTARLNILDCAYGYFKTGENSLKEIIRFST
RDGKIQILQELFEDSYFGADRIMSQLIEKTPDVAMMIFDLCVYQDEYLTHRSYGEMEVER
RVSYSFFPFKRNNPEDKPGGKLEAIESMVNFRRDNCLGHPLVLRFLSHKINSSRIQKWFF
FNILLYAAFLFTLTAYGTIESQGIYNLKSPGMIALSLIILIFCALHFIKEVLQFVLSTAN
YIRDFENYIEWVIFICAVIYVVPGSSKKAEIQIGAGAISVFLGWINFSLFLKRFSLFGIY
IIMAKRVFLTVCKVLPLVLLFIVAFSLSFSLLIPVDQGFKNIPVSILTTFVMMTGELDYR
DIFLPSRPLHVLQKVLLVLFILMISIAVMNLLTGLAVDDINDIMTRSKEEKRIFRAKLVI
TLERNLRNVPFFSLPKNLDGLEDFPERKSQSSWLLRQWKKVYEDSDEVEEQLKAMAGKNG
DNCNKQFDELRDEIKKTINEAIQNKFEKIEAMFEKIQA
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgctatatgactttgaatgtcagcaacataatatctttcgaagagtaaaattaacaatg
gaagaatcgacaagcggggcgaataaaattacagaagatgatatcaacggaaatggtaac
accacggttcgaaaatccgaaaaaacacaggatgatactcatgataggcgggaaatagtt
agcgaagcggaacaggaaatgcgtaacagacgtcttgacgcaataacggtaaaaactacc
actaggtcttgcgctgcgcttgaagtggcagctggagtagaaaagaataaagtattcccc
atcaaagctgaacgtgtatttgcttatgaaagcgattctcggttagaaacgcctgaaaaa
agtcctgcagaagtagagttgtctcaacgaccaattgttcgattggatgaatttattttg
tctgccgctgcaaaaaaagaagaggaaaggccatttcctgttcaaaaaggtccaacaccc
cgttatctctgggatgatttcggtgaagattttgatgctcagcaggctttatctgatgca
gccaacatagaagaaaaaagaccatttattgtaaggcaagaaagcgtggaggaaactgaa
aaggaacgcattccattgatgaagaataacgagaaaacaggatataaccaaaaattgtta
acaatgcgaaccagaaatacgaatatggtctatactctctatttgacgcacagtgaacaa
acacaaaatgcacaatcagaatttatgcaaaagaaaactcctgagtcttcgtcaccgtcg
aaaacctcactacgaaaagggatatcttactctgaagataaatctaagattgcactcata
cgtaaggcagaggaaaaatttttcacaagtagtacatctggacacaaggttgatgaaaaa
actgtgatgagatactgcgatatcgcaacggcaatatatcttgacgatgatctgaacctg
agcagatttcttactaatgaactgaagcacagcgaggaaatccaacgtcgtatactagaa
gcagtcgagctgaacagtttgaagtgtttgttggtgctctgtgacacttatgaaaaactt
cccagtacaacagaggaagatgtccatttgtttcaccgccgctacgggctctcttcttgg
ccattgaatgaacgccccaaagagtcagctgttcacctcgttgcaaacaaacttacgtcc
attaaagcgatgaaggttttagaaaagcatccgagattcctggatgaattttcagacatt
ccggacagtcatggctcttctccacttcttttggcgatcaaatgcaacaatatggaggtg
gtgaagcgattgctcgctagaaaaccagacttaaacaagcgaaataaacataatgaaacg
cctattcttgtggcggccttaaacgacgatgcagatgttataaaagaaatgctggagata
tatcctgaaactgaacttcttgaaatcatgagaaacattgatggaaagggccattcaata
ctttatcctgcctctcaaagcggtaaaccagaagtacttaacctcattatgaagcgaggc
tggtggcccgattttttggatcaagagaagaaaatgtttgaaaaatgggaatcgtttgtg
tgcaatgtttgttcaaccgggtgtaaagaacttgcagaaacaatattcaaacaaaatccc
aaacttcttgaaccagaaggtgacaagtttacccctcttatgagtgcggccaaagcaaac
caattggagattgtccagcttatcttcgaattcagggcggattatagtctttttatgact
tgtgatggaaaaggcaggaatgtctttcactattccgttgaaaacccagatattctacgt
tatcttcttgaacagtacgaaaaggtcagcattgataaacatgatgttaataaaatggac
aacttggaaaacactccaataaaacttgccgcagttagaaaattgaaagagagtttcaaa
attctcttgcaattcacgacaagtgaagcggatatattttcagctcatcttattcataat
gtggactttgaggttttgaagatgggtcttcttatctggaaggaaaaggaccccgaagca
gtagcttgtctgctaaatggcgatcacaagcaacatcaaccgtttttggaagctgctaaa
aaaggaaacattcagttgatgcagtttttcttggaacaaggagcaaatcattcacaaaga
actccaaatgatcaaactgctattcattacgccgtgctttctggaaagcttgctgcggtg
caattcctgctgaaaaaagaagagtttttagaaatgatcaattttacagatgacgtaaac
attactgcggctggttatgcaacacagagtggaaacgtggagatactcagatatctgttg
gataataatgcgaagatgaaaagtgacacaaaaacggccagactcaacattttagattgt
gcctatggatattttaaaactggcgagaattctcttaaagaaattattaggttttctaca
agggatggaaaaatccaaattttacaagagttatttgaagactcgtatttcggtgcggat
cgtataatgtcgcagctgatcgaaaaaacaccagacgtcgccatgatgatttttgacctc
tgtgtttatcaagatgaatatctcactcaccgttcttatggtgaaatggaagtagaaaga
agagtgtcgtactcgttttttcctttcaaacgaaacaaccctgaagacaaacctggcggc
aagcttgaagctatcgaaagtatggttaacttcagaagggacaactgtttgggtcatcca
ctagttttaaggtttttgagccataaaattaattcgtcaagaattcaaaaatggttcttt
ttcaatattcttctttacgctgcttttttattcaccttgaccgcatatggcaccatcgag
agtcaaggaatttacaatttgaaatcaccaggaatgattgcattatcgctaattattttg
atcttttgtgcacttcatttcatcaaagaagtacttcagtttgttctaagtactgctaat
tatataagggacttcgaaaattacatcgaatgggtgatattcatctgcgctgtcatttat
gtggtgcctggaagtagtaagaaggcggaaatacagataggagctggtgctatatcggta
ttcctgggttggatcaacttttctttgttcttgaaaaggttttcattgtttgggatctac
atcatcatggcgaaaagagtttttctcactgtctgtaaggtgttaccactcgttttgttg
ttcatcgttgcgttctcgttgtcattttcgctgcttattcccgtggatcaaggtttcaaa
aatattccagtttctattttgacaacattcgtcatgatgacgggagagttggactatcgg
gatatctttctcccaagcagaccacttcacgttttgcagaaagttcttcttgtgctattt
attcttatgatctcaatcgctgtaatgaatttattgactggtctggctgttgatgatatt
aatgacattatgactcgttcgaaagaggagaaaagaatttttagggcgaagcttgtcatt
acattggaaagaaatctacgcaatgttccattcttctcactgcctaaaaatttagatggc
ctggaggactttccggaaagaaagtctcaatcttcgtggctcttacgccagtggaaaaag
gtgtacgaagatagcgatgaagtggaggaacaattaaaagcaatggctggtaaaaacggg
gataattgtaacaaacaattcgacgaactgagggacgagattaagaagacaattaatgaa
gcgattcagaataaatttgagaaaattgaagcaatgtttgaaaagattcaagcatga
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integrated database retrieval system
