Dendronephthya gigantea (soft corals): 114517369
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Entry
114517369 CDS
T06112
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114517369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114517369
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114517369
mRNA degradation factors
5'-3' decay
Decapping complex
114517369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
DUF4745
Metal_resist
DUF2239
Pox_P35
DUF1400
UCH
Motif
Other DBs
NCBI-GeneID:
114517369
NCBI-ProteinID:
XP_028392864
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MDSANEDAARVLKGILNIGGMLGSDNGQASSTHDIESDSNRKNGHKFVEENITESIDSYS
DRESDTFPLDPVRQFVNFSGDEQQGSVAIYGNEVHVTADEVDANVTGSSRIRINPVVNFD
WESKYYNGNLLGVSSKYMAYVIRAKSGYVLRILNRKTVVKALIKGFTGSIEDVSFSHDNS
DQLACIDAAGDVFVWTISEDDNQIDYDLKLHVKRENNKLPEPSSGNRIVWCPYIVDEEEN
VSEKVLSVIVGQVAEVLHVDMITKKYGNVVDVEDIKSGILRIQNGHTKFITDISLAPDGS
VLATASDDGGVKFWQLNFESADAPLCLHEWQPHEGQSVSRLMFCDNHLAEDNKSPFWRFL
ITGAKRNSELKIWCTVTWSCLQTIKFKPPASSLPSVNPPPLKLKASLDLSSQFLVLSDID
RKVLFVFLLHQNLDEGKAHVTSVAHFILTQPLLSFVISEAKTFKASMRDSMDQNGDREDH
EQDEEGQEDSEEKPIPTIRIKLHCINPKAMQEMIVQYYPYTSIRPVTPTSLAASSITNTE
TGIQDGLSDVSGLDTSLTELEDTGTRSDNSTPRLIAPDAFVTMVPKPVKPISKGAKDIAV
TQAAPASVTSSITSVTSMSNSLLSEDVNQPRGEKSQIAESECSFKTCDDVTLQDHSSGAN
SWLLGETSPLGPPLPVSPDPAKVPFPAFNTEIRGVNEAPKDDISAIAHSTPMRPLRTLDG
DEDNDKTPTGDDEITVKKDDILSSSPRDSPLLPQGHSPPGEKGEDEKLMFAEGHGQAGFD
SIGSERFFTKMKDFTKVSSLQTPVTGQRNETDEGLSRSRKRNTNLTVTPRKQIDIPPDAR
EQAPPTNSAALDDIRDDIRQLRELLQAQQREQNVKISDVLREEVASLEGAVSSSLGSILA
EHNAEQDQMFEKFTRDKNVNEKQRYEKMTTSITTAVLNKVEKIVKNEIRNSVGSGFQKIA
PSLQDELNTVMTQKLRVADEVMRESIARMVKEKSVLDAIGKAVGEAIQVSFSATMNDFLN
KSMLPGFEKACRAMYAQINTAFENGTKQYIQNFESYAESRKEIEKQQKDTIVDQLQILVQ
NFQVASEKLSTSMSGSLLEMMQTQLTTSMKKLQSSLLEQLQEDLNKSLQETIQKEVTNVL
IEQSAFSGESKDQTKHRNTQLRIKQLIDERNFSGAFLEALTAGDLELVTLVCQACDPSEL
FGQDPCPFNQPTLLSLIQQLSVELSSNTELKYRYIEEAILALDTEDPVTKEHVDAILRGL
CEQIKATNHLLAQDDSTKPLQRSLKRLYMAAMSLIK
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggactctgcaaatgaagacgccgcaagggttttaaaaggaatactaaacatcggtgga
atgcttggctcagataatggacaagcttcatcaacacatgatattgagagtgacagcaat
aggaaaaatggacataaatttgttgaagaaaatataacagaatcaattgattcctacagt
gacagagaatctgatacatttcctttggaccctgtccgtcaatttgtaaatttttctggg
gatgagcaacaaggcagtgttgcaatatacggcaatgaagtgcatgtcacagccgatgag
gttgatgctaatgttactggaagcagcaggataaggatcaacccagttgtgaattttgac
tgggaatcaaaatactacaatgggaacttacttggtgtttcatcaaaatatatggcctat
gttataagagcaaagtcaggttacgtattgcgaatcctgaatcgtaaaactgttgtgaaa
gcccttatcaaaggattcacaggcagcattgaagatgtgtcattttctcatgataattct
gaccagcttgcttgcattgatgctgctggtgatgtgtttgtgtggacaatatcagaagat
gacaatcaaatagactatgatttgaaactgcatgtaaagagggaaaacaacaaactgcct
gagccctcgtcaggaaaccgtattgtgtggtgtccgtatattgttgatgaggaggaaaac
gtctcagaaaaagtgctgtcagtaattgttggacaggttgcggaggtgttgcatgtggat
atgattaccaagaaatatgggaatgtagttgatgtggaggacattaaaagtggaatctta
aggatacagaatggtcatactaagtttatcacggacatttccctcgccccagacgggagt
gttttggccacagctagtgatgatggtggagtgaaattttggcagttaaattttgaatcg
gctgacgcaccattgtgtctacatgaatggcagcctcacgaaggacaatccgtgtcaaga
ttgatgttctgcgataatcatttagcagaagataacaaaagtcctttttggaggtttttg
atcactggggcaaaacgcaacagcgaactgaaaatatggtgtactgtcacgtggtcctgt
ttacagacgataaaatttaaaccaccagcatcaagccttccttctgttaacccccctcct
ctgaaactcaaagcaagtttggatttgtcatcgcagttcctcgtgttgtctgatattgac
cgaaaggttttgttcgtgtttctcctgcaccaaaatctcgacgagggcaaagctcacgtg
acctctgtagcgcattttattctaactcaaccgctgcttagttttgtcatatctgaggca
aagacgttcaaggcgtcgatgagggatagcatggatcagaatggtgatagagaggatcat
gagcaggatgaagagggacaggaagacagtgaagagaaacccattcccacaattaggatc
aagcttcattgtatcaacccaaaagcgatgcaggagatgatcgtccagtattatccgtac
acttcaatacgtcccgtaacaccaaccagtcttgctgcctcttcaataacaaatactgaa
acaggtattcaagatggcttatctgatgtgagtggactggacaccagcctgaccgagctg
gaagacacggggactaggtctgacaattcaactcccagactcatcgctccagatgcgttt
gtgaccatggttcctaaacctgttaaaccgatttccaaaggtgcaaaagatatcgcagtg
actcaagcggcccctgctagtgtgacgagcagcataacatcagtaacttccatgagtaac
tcgttgctatccgaggatgttaatcaacctcggggggaaaaatcacaaatcgcggagagc
gagtgtagttttaagacatgtgatgatgtcacccttcaggatcactccagtggtgcgaat
tcgtggctactaggggaaacgtcccccctcggacctcccctcccggtatctcctgatcct
gcaaaagtaccttttcccgcttttaataccgagatacggggggtgaatgaagctcccaaa
gatgatatatccgctattgctcacagcacaccgatgaggccacttcgtactcttgatggt
gatgaagacaacgataaaacaccgacaggtgatgacgagattaccgtcaaaaaagacgac
attttgtccagttctccacgagactcgccgttgttacctcaaggccacagccccccgggt
gaaaaaggtgaggacgagaaattaatgttcgctgaaggtcacggtcaagcgggctttgat
tcaatcggaagcgaacggtttttcacgaagatgaaagatttcacgaaggtgagctctttg
caaacacctgtaactggacagcgaaatgagaccgatgaaggcttgagcagatcacgtaag
cgaaatacaaatcttacagttactcctcgcaagcaaatcgacatcccgccggacgccaga
gagcaggcgccaccaacgaacagcgctgcgctagatgatattcgagatgacatcagacag
ctgagagaattactgcaggctcagcaacgggaacaaaatgtaaaaatatcggacgttctg
agggaagaagtagcgtcgttggaaggcgccgtgtcctcgagccttggtagcatccttgcc
gaacataacgctgaacaggatcaaatgtttgagaaattcacccgcgacaagaatgtcaac
gagaaacaacgttatgagaagatgacaacttccataaccaccgctgtgttgaacaaggtt
gaaaaaattgtcaaaaatgaaatcagaaattccgttggctcaggttttcaaaaaattgcg
ccctcgctccaggatgagcttaacactgtgatgacacagaaacttagggttgcggacgaa
gttatgagggaaagcatagcaagaatggtcaaggaaaagagtgtacttgatgcgataggt
aaagcggtcggtgaagcaattcaagtgtcattttcggcaactatgaatgatttcctgaac
aaatccatgctgcctggtttcgagaaagcgtgtagagctatgtacgcgcagattaacacc
gcatttgagaatggaactaagcaatacattcagaacttcgagagctacgctgaaagtcgt
aaggagatcgagaaacaacagaaggacaccatcgtcgatcaacttcagattcttgtacaa
aactttcaagttgcttccgagaaactctcgaccagcatgtcgggaagtttattggaaatg
atgcaaacacagttaacgacatcgatgaaaaagctgcaaagttcattgctcgagcaactg
caagaagatttgaacaaaagtcttcaagaaacaatacagaaggaggtcacgaatgttttg
atagagcaaagtgcttttagtggtgaatctaaggatcaaacaaaacataggaatacacag
cttcgtattaagcaacttattgacgagagaaactttagcggagcattcttagaagcatta
acagcaggagacttggaacttgttactttggtttgccaagcatgcgatccgtcagaactg
tttggccaagatccatgtcctttcaatcagcctacattgctctcgttaatacagcaattg
tcagttgaattgtcttcgaatactgaactaaaatacagatatatagaagaagcaatcctg
gcactggacactgaagatccagtcacaaaagaacacgttgatgctatccttcgaggactt
tgcgagcaaattaaggctacaaatcatttgctagctcaagatgactcgactaagccgctg
caacgttctctaaaacgactctacatggctgccatgtcgttgatcaaatag
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