Dendronephthya gigantea (soft corals): 114517379
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Entry
114517379 CDS
T06112
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114517379
04121 Ubiquitin system [BR:
dgt04121
]
114517379
Enzymes [BR:
dgt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114517379
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114517379
Ubiquitin system [BR:
dgt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114517379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-RING_2
zf-C3HC4_2
ANCHR-like_BBOX
Vgb_lyase
Mala_s_1-like
zf-RING_5
zf-C3HC4_3
DUF5711
TPR_MLP1_2
DUF7185
ARA70
Motif
Other DBs
NCBI-GeneID:
114517379
NCBI-ProteinID:
XP_028392874
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MRFWYNDMAFASDRSASQPLCPGCGKQFENPKILPCLHTFCRRCLMDAVDRDPNGSLACP
SCYRHVPLNENGVDGLRANMFIENILGIISPQHEQETSERGTNPTARSSLANRICSNCEE
GLCVTSHCQVCNELLCANCTRAHQRVRLTKDHEIVPLADRELSTQEASFRQSRTEYCATH
ESEVLILYCDTCFAPVCRECTIKQHRDHSFIYLQDAVANNASSLRKLVAEAKRESGVIDE
CIVASRAMSERVQVRAQSVSSEIRTTIRRHMSALEERERELLRRVEKIGQVKGKTLHVQI
DELKSSVASLTLACDSAQEALDTEKDEGIRAAKAALSECLNELRMKRSLMNVHEDDTIVF
TPPDLALQTAIRSLGIVSSNACASFSIAQGSGQKRAIRGKSAMFIVQTKDHHGENRCTGG
DTPHVVIQTPDGLFLRGEVFDRQNGTYAVTYRPQVEGLHLVSVTIRGQQIRDSPFRVNVK
KGRNYQNIGVPICCFGSEGEGDGQLCRPWGVCCTKDGNIVVADRSNNRIQVFDRQGNFIY
KFGSAGSRNGQFDRPAGVTCDLQGRVIVADKDNHRVQLFEINGTFVLKFGEKGSKNGQFN
YPWDVAVNTEGQILVSDTRNHRVQLFSADGTFVNKYGFEGGLWKHFDSPRGVTFNHEGHM
VVTDFNNHRLLVISSDFQTARFLGIEGTNNGHFLRPQGVAIDEEGNIIVADSRNHRIQVF
QANGTFCCKFGAPGCSPGQLDRPSGICVTPDGLIVVVDFGNNRIQIF
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgagattttggtataatgacatggcatttgcttcagatcgatcggcttcacagccctta
tgccctggctgtgggaaacagtttgaaaatccaaagatcctaccgtgtttacacacgttt
tgccgtaggtgtctcatggatgccgtggatagagacccgaatggctcgcttgcttgtccg
agttgctacagacatgtgccgctaaacgaaaacggtgtcgacggtttgagagctaacatg
tttattgagaatatcttaggtatcatttcgccacaacacgaacaagaaacgtctgagagg
ggcacgaatccgacagcacgttcaagtctcgccaatcgcatttgtagtaactgtgaagaa
gggctgtgtgtaacatcacattgccaagtttgtaacgaattattgtgtgccaattgcaca
agagcccatcaacgagtacgattgactaaagaccacgaaatcgtgcctttagctgaccgg
gaattgtccactcaagaagcgagctttcgtcaatctcgtacagaatattgtgcaacacat
gaatccgaagtgcttattctatactgtgatacttgttttgcgcccgtttgccgtgaatgt
actatcaaacagcaccgggatcatagctttatttatctacaagatgccgtagcgaataat
gcaagctctttgcgaaaacttgtagccgaggcgaagcgagaaagtggtgttattgacgaa
tgcatcgtggcttcacgtgctatgagcgaacgtgtacaagtccgagcacagagtgtctct
tcagaaattcgtacaaccataagacggcacatgtctgctttggaagaaagagaaagagag
ttgcttcgtcgtgttgagaaaattggacaagtcaaaggtaaaacattgcatgtgcagata
gacgaacttaagtcgagtgtagctagtctgacgctcgcttgcgactcagcacaagaagca
ctcgacaccgaaaaggacgaaggcattcgggcagcaaaagcggccttgtctgagtgttta
aacgagctacgaatgaagcgaagtctaatgaatgtccacgaagacgatacgattgttttt
acaccccctgatctagcgttacagacggccatcagatcgcttggtattgtaagtagcaat
gcatgtgcttcttttagcatagcccagggtagtggccaaaagcgggcaattcgtggtaaa
tctgctatgtttattgttcaaactaaagaccaccatggcgagaatcgttgtacgggtggt
gatactccacatgtcgttatacaaaccccggacgggctgtttttacgaggcgaagttttt
gaccgacagaatgggacttatgctgttacgtatagaccccaagtcgaaggactccatctc
gtatccgtaacaattcgcggacagcaaataagggattctccttttcgcgtgaacgttaag
aaggggagaaactaccaaaatatcggtgttcctatctgttgtttcggttcagaaggtgaa
ggagacgggcagttgtgtcgaccttggggcgtttgttgtacaaaagatggtaacatcgtc
gtagccgatcgcagtaacaaccgcattcaggtcttcgaccgtcaagggaattttatttac
aagttcggatctgccggttctcgaaatggtcagtttgacaggcctgctggggtgacgtgt
gacttgcaaggccgtgttatagtcgcagataaggacaaccatcgtgtacaattgtttgag
atcaatggtacattcgtactcaagtttggtgagaagggaagcaagaatggacagtttaac
tatccctgggatgttgctgtgaacacagaagggcagattttggtctcggacacgcgaaat
caccgtgttcagcttttcagcgcagacggcactttcgtaaacaagtatggtttcgagggt
gggctatggaagcacttcgactcgccgcgtggcgtcacattcaatcacgaaggccacatg
gttgttactgatttcaacaatcacaggctacttgtgatcagctccgacttccaaacggca
cgatttttgggcatagaaggcaccaacaacgggcacttcttacggccacaaggagtcgct
atcgacgaggaaggaaatataatcgttgccgactcgaggaaccatcgcattcaagtcttt
caagcgaatggtaccttttgctgcaagtttggtgcccctggatgcagccccgggcaactg
gatcgtccttcaggtatatgtgttacaccagatggacttatagttgtggtagattttgga
aataatcgcattcaaatattctaa
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integrated database retrieval system
