KEGG   Dendronephthya gigantea (soft corals): 114517489
Entry
114517489         CDS       T06112                                 
Name
(RefSeq) exosome complex component RRP41-like
  KO
K11600  exosome complex component RRP41
Organism
dgt  Dendronephthya gigantea (soft corals)
Pathway
dgt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dgt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114517489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dgt03019]
    114517489
Messenger RNA biogenesis [BR:dgt03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     114517489
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     114517489
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 114517489
NCBI-ProteinID: XP_028393035
LinkDB
Position
Unknown
AA seq 244 aa
MAGLEILSPEGFRLDGRRPNELRRLVCRMGVFTQADGSAYIEMGNTKTLAAVYGPHEVLN
KAKARHDQALINCEFSMATFSTTERKTRAKGDRKSVEISMAIKRTFESCILTSNYPRSQI
DIFVQILQADGGNYSACINAATLALLDAGIPMKDYVCSCAVSFINESALLDINYLEESSS
APQLTLAILPKSEKIVLLRLDSKLHADNLEKILDLAKKGCKDVYALLRRHVHDFAKDSLA
SMCT
NT seq 735 nt   +upstreamnt  +downstreamnt
atggcaggtctagagattctttcacctgaaggattccgtctagatggacgtcgaccaaac
gaactacgccgtttagtgtgtcgtatgggtgttttcactcaagctgatggttcggcgtat
attgaaatgggtaacaccaagacattggccgcagtttatggtccccacgaggtcctaaat
aaggcgaaagctcgtcatgatcaagccttaataaactgtgagtttagcatggcgacattt
agtactacagagaggaagacaagagctaaaggagatagaaagtctgttgaaatatccatg
gcaattaagcgaacatttgagtcatgcatcctgacttcaaattatccaagatcacaaatt
gatatttttgtacagattttgcaagctgatggaggaaactacagtgcctgtattaatgct
gcaactttagcattactagatgctggtattccaatgaaagattatgtgtgttcatgtgca
gtgagctttattaatgaatcagctctcttggatataaactatcttgaagaatcatcaagt
gcacctcaactaacactggcaattttgccaaaatctgagaaaattgtccttctcagactg
gactcaaagttacatgcagataacttagaaaaaatacttgatcttgcaaaaaagggctgt
aaggatgtctatgccttgttacgaagacatgtccatgattttgcaaaagattcattggca
tctatgtgtacctga

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