Dendronephthya gigantea (soft corals): 114518195
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Entry
114518195 CDS
T06112
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase-like isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dgt03016
]
114518195
Enzymes [BR:
dgt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
114518195
Transfer RNA biogenesis [BR:
dgt03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
114518195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TraT
CMD
Motif
Other DBs
NCBI-GeneID:
114518195
NCBI-ProteinID:
XP_028393939
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MSCGGGLDDIEDIVSKDDLTPNDRISVKRDILPKARKGRRIMKDFKDEKPSSDSIIPGTQ
NIYIKTWGCSHNNSDSEYMAGQLAAYGYKIIDNPENADLWLLNSCTVKNPSEDNFRNSIK
KAKESGKHLILAGCVGQGQPGHETLRGLSIIGVQQIDRIVEAVEETLKGHTVRILGQKKE
NGKKIGGAKLDLPKIRKNPLIEIIAISTGCLNQCTYCKTKHARGELGSYSPEEIVARAKQ
AFQEGVVEIWLTSEDTGAYGRDIGSSLPELLWQLIEVIPEGAMLRLGMTNPPYILEHLEE
IAKIMNSPRMYSFLHCPVQSGSDSVLADMKREYCIDDFKHVVQYLQERVPHITVATDVIC
GFPTETEQDFEETVKIVELFKFPSLFINQFYPRPGTPAARMKRIDTAIVKGRTRRITKLF
NTYQPYDHKLGEKQKVLITEESHDGIHYVSHNKSYDQVLVRKDEGDLMGKMVEVVITETG
KHFLKGKVLKNNPVHTPSIAPPFAKGVVSGVKQIPKPFSTTSLKSNVEFWIKSALLVLLM
AVIFDLIRVGRHWLRT
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtggtggagggttagacgatatcgaagatattgtaagtaaagatgacttgact
ccgaatgacaggatttctgttaaaagagatattttacccaaagcaagaaagggaagaaga
atcatgaaagatttcaaagatgaaaaaccatcttctgatagcatcattccagggacacaa
aatatatatataaagacgtggggttgttcacataataatagtgacagtgaatatatggct
ggtcagctagctgcttatggctacaaaattatagacaatcctgagaatgcagatctttgg
ctgctaaacagttgcacggtaaaaaatccttcagaggataattttagaaatagcatcaag
aaggcaaaagaaagtggcaagcatcttatcttagctggatgtgttggacaaggacagcca
gggcatgaaacattgcgtggactaagtatcattggtgttcaacaaatagacagaatcgta
gaagcagtagaagagactttgaaaggtcacactgttcgaatattagggcagaagaaagaa
aatggtaaaaaaattggtggtgcaaagttagacttgccaaaaatacgtaaaaatccacta
attgaaataattgctattagcactggatgtctaaatcagtgtacatactgtaagacaaag
catgccagaggtgaattaggaagctattctcctgaggaaattgttgctcgtgctaaacaa
gcctttcaagagggtgtggttgaaatttggttgacaagtgaagatacaggagcttatggt
agagatattgggtcatctttacctgaattattgtggcaacttattgaggtgattcctgaa
ggagcaatgttgcggttaggcatgactaatcctccctatattctggaacatcttgaggag
atagcgaagatcatgaatagccccaggatgtattcttttcttcactgcccagtacaaagt
ggatccgatagtgttttagctgatatgaaacgtgaatactgcattgatgattttaaacat
gtcgttcaatatcttcaagagagggtaccccatattacagtagcaactgatgtcatatgc
ggttttccaactgagactgaacaggattttgaagaaactgtgaagattgttgaacttttt
aaatttcccagtttatttattaatcaattttaccctcggcctggtacgcctgctgctcgt
atgaaaagaattgacacagcaattgttaaagggagaacaaggagaattacaaaactattt
aacacttatcaaccatatgatcataagttgggtgaaaaacagaaagttttgattacagaa
gaatctcatgatggcattcattacgtctcgcataataaaagttatgatcaggtgttagtt
cgtaaagatgaaggtgatttgatgggaaaaatggtggaagttgttattacagaaactgga
aagcatttcctgaaaggaaaagttcttaagaacaatcctgtacatacaccaagtattgca
ccaccttttgctaaaggtgttgtcagtggtgtcaaacagataccaaagccattctctacg
acttcactcaaatctaatgttgagttctggattaaatctgctctccttgttttgttgatg
gccgtcatttttgatctaatacgagttggaaggcattggcttcgaacttga
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