Dendronephthya gigantea (soft corals): 114518875
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Entry
114518875 CDS
T06112
Name
(RefSeq) LIM homeobox transcription factor 1-beta-like isoform X1
KO
K09371
LIM homeobox transcription factor 1
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dgt03000
]
114518875
Transcription factors [BR:
dgt03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
114518875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Swc3_C
Motif
Other DBs
NCBI-GeneID:
114518875
NCBI-ProteinID:
XP_028394704
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MLDDKATLQQGKDCSYDHGACPDMPDDPWGSQKLCHMMSKVKKEGGNPNTTCLAGNTVNI
CTGCHQAIEDRFLMKVTEDPWHESCLQCCICHAQLSRKCFSRERKLYCRTDYEKLFGTKC
SHCGEPIPSNELVMRTAGHVYHINCFACVVCECRLEKGQEFALKDNKLYCKEHFTNMKII
KQEREDNSDSEDPDSDTDSDGKKPAKRPRTILTSQQRKIFKSSFEVSSKPCRKVREELSR
ETGLSVRVVQVWFQNQRAKIKKLARRNNPESDNAASCRVTNRQRPGKKSKEEKESNKKNT
NGCNSPLSMGQPVVTLPLPPMSHYTNLGPVITPGQYPGAPNHMAQMMGFPFPQNMKPLEP
IPEMSPSMDGMPVMDDQMPGQIPFSTPSEINSLSAANLINTQNGQNHLELMHDMLNSF
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttggacgataaagctacactacaacaagggaaggattgttcatatgatcatggcgca
tgcccagatatgccagacgacccatggggaagccaaaaactttgtcatatgatgtcaaaa
gtgaagaaagagggaggaaatcccaatacgacatgtctagctggaaacacagtaaatatc
tgcaccggctgccatcaggcgatagaagatagattccttatgaaggttactgaagaccct
tggcatgagagttgtctgcaatgttgtatatgccatgctcaactgtctaggaaatgtttc
agtcgtgaacgaaaactgtattgcaggactgactatgagaagttgtttggtacgaaatgc
agtcactgtggtgagcctattccatcaaacgagttggtgatgagaactgctggtcatgtg
taccacattaactgtttcgcatgcgtggtctgtgaatgtcgtctcgagaaaggacaggag
tttgccctcaaagataacaaactctattgtaaagaacattttaccaatatgaaaataatt
aaacaagaaagagaggacaattccgatagtgaagacccggacagcgacacggactctgac
ggaaagaaacccgcaaagcggccacggacaatcctaacgagtcaacagaggaaaatattt
aaatcttctttcgaagtcagctcgaaaccatgtcgcaaggttcgggaggaactgtcacgt
gaaactggtctgagtgtgcgagttgttcaagtttggttccagaatcaacgagctaagatc
aagaaactagctcgaagaaataatcctgaatccgacaatgctgccagttgcagagtaaca
aacagacaaagacctggaaagaagtcaaaggaagagaaagagagtaacaaaaagaacaca
aacggctgcaacagtccactatctatgggccaacccgttgttaccctaccactacctccg
atgtcccattatactaacctaggtccggtcattacccccggacagtaccctggagcacca
aatcatatggcccaaatgatggggtttccattcccacaaaatatgaaacctctcgaacca
ataccggaaatgtcaccatcaatggacgggatgcccgtcatggatgatcaaatgcctggt
cagataccgttttccacgccctctgagatcaatagtctctcagcggcaaatttaattaat
acacagaacggccaaaatcatttagaactaatgcatgacatgctaaattcattctag
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