Dendronephthya gigantea (soft corals): 114519180
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Entry
114519180 CDS
T06112
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114519180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dgt03000
]
114519180
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
dgt03310
]
114519180
Transcription factors [BR:
dgt03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
114519180
Nuclear receptors [BR:
dgt03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
114519180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
114519180
NCBI-ProteinID:
XP_028395065
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MTDTTNTQPTELGDEIPAYAPSVVTPVTTLTQHFYHPRPMIPGSALAFPVNIQGQPLLFQ
SPYYTPFHYSPLINNGPIPFQKATFPYHESVIHSTTSEPARVDDQDGPSPAKKPMPVIIT
KDENSSPTDCPITSHINMTGSLASNTTTSGGHFNFSDAPMVLINQPKVEVTDQNSQEHTP
CLAMTSSHTRQMNVVMSPSSSPLTQSKMHSPTSNEFVSPSTSTSSEPNEQNSDNQPTVCV
ICGDKATGNHYGVTSCEGCKGFFKRTVQNKKVYTCRNLSKDCPIDKRHRNRCQFCRYQKC
LNAGMLKEAVREDRTPGGKHKNANLLKIKLPSLEDSPSRIQSSHWSSPLIEKFLLIRNMA
IPPLNKNSVSDDVKIQTINYVVQLADWQVEEVLGWFEKLEFLANINLEDRKVLVLNSIME
ILAFGLARRSMDINGSLLLGEGVLLDMETATIAGIEEITQRILQLSSKLKELRLVEEEYV
CLTIIVLLNPDIRGLNNQELIEKLQDQVHTSMQEFITHRYPGQPNRFGNVLLRLPELRSI
STKITERLFLLSVTLGNDLGINKRLNDLLYISK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgactgacactacgaatacacaacctactgagttaggtgatgaaatccctgcttatgca
ccttccgttgtgacacctgttaccacactcacacaacacttctaccatcctcgacccatg
ataccaggatcagcgctggcatttccagtgaatatacaaggccaaccactactatttcaa
tctccatattatacgccattccattactccccacttataaacaatggtccaataccattt
caaaaagcaacatttccataccatgaatctgttatacactcaacaacatctgaaccagca
agagttgatgatcaagatggcccaagtcctgctaagaaaccaatgccagttattataacc
aaagatgagaattcatcaccaactgattgccccataacatcacatataaatatgacaggc
tccttggcaagtaacaccactacttcagggggtcactttaacttttcagacgccccaatg
gttcttataaatcaaccaaaagttgaagtgacagaccaaaactctcaggaacatacacca
tgcttagcaatgacttcaagtcacacaagacaaatgaatgttgtaatgtctccaagttca
tcaccactaacacagtccaaaatgcactccccgacatctaatgagtttgtaagcccgagt
acatcaacctccagcgaaccaaacgagcaaaacagcgataatcaaccaaccgtttgcgtg
atttgtggggataaagcaacaggcaatcattatggggtgactagttgtgaaggatgcaag
ggttttttcaaacgaactgttcaaaacaaaaaggtgtacacgtgtaggaatttatcgaaa
gattgtccgatcgataaaagacaccgaaatcgttgccagttctgtcgctatcagaaatgc
cttaatgctggtatgcttaaggaagctgttcgcgaagacagaacgcctggtggtaaacac
aagaatgcaaacttgttgaaaatcaaacttccttctttggaagacagtcccagtcgaatt
cagtcctcccactggtcctcgccgcttatcgaaaaattcttactgatcagaaacatggca
atccccccgcttaacaaaaactctgtcagtgacgacgtgaaaatacaaactattaactat
gtcgtgcaacttgctgactggcaggtggaggaagttttgggttggtttgagaaacttgaa
tttctggccaacatcaacttggaggatcgaaaagttttggtgttgaattcaattatggag
atcttagcattcggactcgcgcgacggtcaatggatatcaatggtagtctgttattggga
gaaggagtgcttttagacatggagactgcaacaatagctggcattgaggaaattacgcaa
agaatcttgcaactatcgtcgaagttaaaagaattgagactggtagaagaggaatatgtg
tgtttgacgatcattgtgttgttgaatccagacatcagaggtttaaataatcaagagctt
atcgagaaactacaagatcaggtacacacgagcatgcaagagttcatcacacatcgttat
ccaggccaacctaatagatttggtaacgttttattacgtttgcctgagctgcgctcgatc
agtacgaaaattacggagcgtctgttcctcttaagtgttacacttggaaatgatttaggg
attaataagcgcctgaacgacttattgtatatctcgaaataa
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