Dendronephthya gigantea (soft corals): 114519215
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Entry
114519215 CDS
T06112
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114519215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgt03021
]
114519215
03036 Chromosome and associated proteins [BR:
dgt03036
]
114519215
Transcription machinery [BR:
dgt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114519215
Chromosome and associated proteins [BR:
dgt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114519215
PBAF complex
114519215
GBAF(ncBAF) complex
114519215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
114519215
NCBI-ProteinID:
XP_028395111
LinkDB
All DBs
Position
Unknown
AA seq
1329 aa
AA seq
DB search
MAVRKKDGGPDWKLYESTSVCEQFEQVKQYLLKNCKKYVQAEPPTNKGLAYLTGQLLQFQ
EDNFGINGNKRLLCKLPVKLFLDYSFGGSLCHILATVFKTKTEQGWRRFDFQSPSRLDRN
VELFLNIEKSLKEGKFLSVPNVYLMPDIEPKVMTKLKDVLKKHNGSIAEDKESATHIVHP
LPPPSQDDDWLRPIEKRDGKVLVHWWYFPDSYDTWVSNEEVTDEPEPQPQHQGQWEVNGR
WLSDLDIYNEWMNEEDYEITDASLTVDGKVKDGAPSEVRKRRKSLRSGGKQDDEGPSSPE
GDRKKRKRSPSPEKKKKLNTKKSNVPEKVKNKPEIREKQEEIEKEEDSTQDLPDPSPVPV
IEEINLPTSEAAKSKDPDSGPIKGGVMMDISAPPKTQEEEDNETNASEDVSSVPGSPGSS
QDPKDGGKSAEMFDDPTTYDENLTEQSHHVIVPSYSSWFDYNSIHAIERRALPEFFNGKN
KSKTPEIYVAYRNFMIDSYRLNPTEYLTATACRRNLAGDVCSILRVHAFLEQWGMINYQV
DADSRPTPMGPPSTSHFHILADTPAGVQPLQPPRSQNPPSDRMFQFKEESSVKQPVKTEL
NNFGLRTDQYLSKKSQKAATATKEWTDQETLRLLEGLEMYKDDWNKVAEHVSSRTQDECI
LHFLRLPIEDPYLEDSTGSLGPLACQPVPFSQQGNPVMSTVAFLASVVDPRVASAAAKAA
LDEFGKMKEEIPMAVLEARVKKATEEMDTESKVEGKEAEPMQLDNGVDGQPSGADQENTS
ESKTKPNSASDSQEINKENMATAAASALAAAAVKSKHLAQVEERKIKSLVALLVETQMKK
LEIKLRHFEELETIMDREREALEYQRQQLLVEKQQFHQEQLKLAEMRARASHVSTTSPAG
SDPVSTQPQALQVSTASNSPQAIQPMSNQPARVPTPVESTSHTPGSNPPSVGPSPSSVGS
QERTTPNTALVSSPSAVTQQGKQPGEQQVESSIQPSASHQQLQPPPRQQQTPPPPTSQQP
SQAIQGQQPQPQQPIQQQQAQQPIQQQQSQQPIQQQPIQQQPIQQQPIQQQPPQAPQQAM
QQLQQLPPQLQQMQMQQQQQHMLQKYQQMQQRQSIFHQQPILPKQQQQQPSNQLQSKLSN
QTQMAAQRMQTSRGQTSLGRSSSPGTNVRMATSPRDQSPGIATSHPGSLPTSTPSSLPMY
MSSPNYPGGVVSSNVNRPLMPSPGMYSTSGLPPGQVPSSTGYLMNQPSLPPGMSGMQYTG
QRSGMPPISSMSNRPPIPNYPQSFAGPPGQPPALLLIQYQDSWHPLAANIHPRVTDILLK
SNSQCSRSC
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggcggttagaaagaaagacggtggaccagattggaaactttacgagtctacttctgtt
tgtgaacagtttgaacaagttaagcagtacttgttgaaaaactgtaaaaagtatgtccaa
gctgaacctccaacaaataaaggtctagcttatctcactggccaattgctacagtttcaa
gaggataactttgggattaatgggaacaagcggctactttgcaagctacctgtcaagcta
tttctggattacagttttggtggttcattatgccacattcttgcaaccgtttttaagacc
aaaacagagcaaggatggagaagatttgattttcaatcaccatcaagactggacagaaat
gttgaacttttcttgaatattgagaaatcattgaaagagggcaaatttttatctgttcca
aatgtttatcttatgcctgatattgagcctaaagtgatgacaaaacttaaagatgtattg
aaaaaacataatggatcaattgctgaagacaaagaatcagcaacccatattgttcatcct
ttaccacctccatctcaagatgatgactggttacgtccaattgagaagagagatggaaag
gtgttagttcattggtggtatttcccagacagttatgatacttgggtgtcaaatgaggaa
gttactgatgaacctgaacctcaaccacaacatcaaggacagtgggaggtaaatggcagg
tggttaagtgatcttgatatttataacgaatggatgaacgaagaggattatgaaatcacg
gacgcatctttaacggttgatggaaaagtcaaggatggcgcaccttctgaagtgcgcaaa
agacgaaaaagtctccgaagcggaggcaagcaggacgatgagggaccgtcaagccccgaa
ggagataggaaaaaacgtaaaagatcaccatctccagaaaagaaaaagaaactaaacacc
aagaaaagcaatgttccagaaaaggtgaaaaacaaacctgagattcgagagaaacaagaa
gaaattgagaaagaagaagatagtactcaagatttgccagatccttcgcctgtgcctgtc
atcgaggagataaatttgccaacctcagaagcggcaaaaagcaaagatccggactctggg
ccaatcaaaggcggagttatgatggatatttcagcccctcccaagactcaagaagaagag
gacaatgagacaaacgcttctgaagacgtgagctctgtcccaggctccccaggatcatct
caagatcccaaagatggcgggaaatctgcagagatgtttgacgatccgaccacatatgac
gagaatttgactgaacaaagtcaccatgtcatagtgcccagttactcatcgtggtttgat
tacaatagtattcacgcaattgaaagaagagctcttccggagttttttaatggaaaaaac
aaatcaaaaacaccagaaatatatgtggcgtacagaaattttatgattgattcatatcga
ttaaacccaacggaatatctcaccgcgacagcatgtcgaagaaacttggctggcgacgtg
tgttccatattgcgtgttcacgctttccttgagcagtgggggatgataaactatcaagta
gatgcggatagtcgccctactcccatgggcccaccctcaacttcccattttcacatcttg
gccgatactcctgctggggtccaacctttgcaacctccgcggtctcaaaatcctcccagt
gacagaatgtttcagttcaaagaggaaagttcagtcaaacaacctgtcaaaacagaactg
aataactttggtctgagaactgatcaatacctctccaagaaaagtcaaaaggccgccaca
gcgacaaaagaatggaccgatcaagagaccttacgcttattagagggtctggagatgtac
aaagatgactggaataaagttgctgaacacgtcagttcacgaacacaagatgaatgtatt
cttcattttctacggttgccgatagaagatccatatttagaagactccacgggatcgcta
ggtccattggcctgtcaacctgtgccattcagtcaacaaggaaacccagtgatgtcgacc
gtggctttccttgcgtcagttgttgatcccagagttgcgagtgcagctgccaaagctgct
cttgatgaatttggtaaaatgaaagaggaaatccctatggcggtgcttgaagcacgggtt
aagaaagcgactgaagaaatggacacagaatcgaaagtggaaggaaaagaagctgaacca
atgcaacttgataatggcgtggatggtcagccctcaggtgcagatcaggagaacacgtcg
gaatcgaaaacgaaaccgaattctgcttctgatagtcaagaaatcaacaaagaaaacatg
gcgacggcagctgcttctgctttagctgctgctgctgttaaatcaaagcatttagcccag
gttgaagaacgtaagatcaaatcattggttgctttacttgttgaaactcagatgaaaaaa
ttggaaatcaagcttcgacattttgaagaacttgaaacaataatggacagggaaagagaa
gcattggaatatcaacgtcaacagcttctagtggaaaagcaacagtttcatcaagaacaa
ctaaaactagctgaaatgagagcacgtgctagtcatgtgagtactacatcgcctgcaggt
tcagatccagtttcaactcaaccccaggctctgcaagtatccacagctagcaactctcct
caagctatacagccgatgtcaaatcaacccgcaagagttcctacaccagttgaaagcaca
agtcatacacctggttccaatccaccatctgttggtccttcaccttcatctgttggttct
caagagagaaccacacccaacacggccttggtatcgtcaccatcagctgttacacagcaa
gggaagcagcctggagaacagcaagttgaatcatcaatacaaccatctgcaagccatcag
cagttgcaaccaccacctcgacaacaacaaacaccaccaccaccaacatcgcagcaacct
tcgcaggctatccaagggcaacagccacaacctcaacaacccatccagcagcagcaggca
cagcagcccatccaacagcagcaatcacaacagcctatacagcaacaacctatacagcaa
caacctatacagcaacaacctatacagcaacagcctccgcaagctccacagcaagcaatg
caacagcttcaacaattgccaccacaactacagcaaatgcaaatgcagcagcaacaacaa
catatgctgcaaaagtatcagcagatgcagcaacgtcagtctatatttcaccaacaacca
atcttaccaaaacaacaacaacaacaaccttccaaccaacttcagtcaaaactttccaat
caaactcaaatggctgcacaacgcatgcaaacctcccgaggtcagacctccctcggtagg
agcagttctccgggtaccaatgtccgtatggctacctcaccacgtgaccaatcacctgga
atagcaacatcacatccgggctcattaccaacctcgacaccatcttcactgcctatgtat
atgtcgtcaccaaactatcctggcggtgtggtcagcagcaatgtcaacagaccactgatg
ccttcacctggtatgtattcaacatcaggtttaccacccggacaagtgccatcatcaact
ggctatctaatgaatcagccatcgttaccacctggaatgtctggaatgcaatatactggt
caacgttctggtatgccacccattagttccatgtccaatcgtcctcctatccccaattat
cctcagtcatttgcaggtccacccggccaaccaccagcattattgctgattcaatatcag
gattcatggcatcccctggcagccaacatccaccctcgagtaactgacattttgttaaaa
agtaattctcagtgctcaagatcttgttaa
DBGET
integrated database retrieval system
