Dendronephthya gigantea (soft corals): 114519284
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Entry
114519284 CDS
T06112
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
114519284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dgt03036
]
114519284
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114519284
Chromosome and associated proteins [BR:
dgt03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
114519284
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
114519284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
114519284
NCBI-ProteinID:
XP_028395196
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MSEEDGPSSSGIGSEKTFYHRRNFVRSYGISIDSSKIHEVAFEEQPENLRALGVNIFDQS
VFEEGVLQQVDEAIAVQEEIFEKEKLRKKLKSVEDELRNVKQKLQRPGIKQHTKESMLID
VQRLTQEENDILQSLQKFEKGKDSCLGDEGISIQNEQSGQISIDRVLHSEARKETEVERL
VRLGVMTPFGSTVEKYDSDAETFNSSRSDGTKCGDNAGTSDDAGRMKLDGTKSNLKQIDT
NEDEALLSSDPDIEINEPTVDSDEEYIPNEDDLKLSFQDDEHVLPEDDLEEPIGEASMAT
NKVQIPQNKAGKKSKRMTQSVKDDGDDRAYKIRIREFKFKKSLREKGIDYEGRDEEENSF
WDEEGPDEEFDGGLKIPSVIWNKLFSYQKTGVKWLWELHTQQAGGIVGDEMGLGKTIQII
AFLAGLKYSNIGRRGSKQNGFGPVLIICPATILFQWVAELHKWWPEFRVAVLHDTGSYKG
PKDTLITRIRNEPGILLTTYSGVRINQDHLLQSRWDYIILDEGHTIRNPDAEVTLTCKQF
RTPHRLVLSGSPMQNNLRELWSLFDFVYPGKLGTLPVFMQEFSVPITMGGYSNATPVQVQ
TAFKCACVLRDTINPYLLRRLKKDVKKKLDLPNKNEQVLFCRLTEEQIELYKEYLASRDV
GSILSGNMKVFPGLIMLRKICNHPDLTTPAGSLLKLRKDEAQQENTDKCREKNDSEYGHW
KRAGKLIVVHSLLKLWKKQKHKVLLFTQTRQMLKILEIFVKSQGYNFCRMDGSTSISSRQ
PLIEKFNKDSSIFVFLLTTRVGGLGVNLIGANRVIIYDPDWNPGTDMQARERAWRVGQRK
DVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLFELFTLDTSDNSKS
GTETGAIFAGLGCEVAVPAKKKGTKRKHSVGDKNVLKAIQERTKEILLTQFASSKESCVQ
ERNEMADTEKEGENVQRNLNEQSCDGVKFESKINNEKLIETSEERESFGDASECTRLPTT
NNPSITGESSEKATGGKMSSSENAKVDDVEKTGSRESSLNDKMTKSSRKKSKKRKRNKVE
GMHIGQLSHSEPYRPRQGPEDVPDKNADDDYILRKLFKKSGVHSALQHDTIVNSGNADHV
LVENEAKRVAAQAAEAVKRSRDHCLQLRNTGLPTWTGQSGVVGSPYGMQERTLFGPKAKK
VEKKENSTTLFTGKSLLQNEKESDLTKPGLGSPMSSTQLLARMRARNSIGGTNAGSDVQS
SEQKLVAIEGGQQDRSSARLKIVRGRRSSPLTKRFI
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaagatgggccatcttcaagtggtattggcagcgaaaagacgttttatcat
cgccgtaattttgtcagaagttatggaatctcgatcgattccagcaaaattcacgaggtt
gccttcgaagagcaacctgagaatttgcgagcgctcggagtgaatatttttgatcaatct
gtattcgaggagggcgttttacaacaagttgatgaagctattgctgtgcaggaggaaatt
tttgaaaaagagaagttgagaaagaagttaaagtcggttgaagatgaactcagaaatgtt
aagcaaaagctccaaagaccaggaataaaacagcatacaaaagaatcaatgctgattgat
gttcaaagacttacacaagaggaaaatgacattctacagagcttgcagaagtttgaaaaa
ggaaaagattcatgtctgggagatgagggtatcagcattcaaaatgaacaatctgggcaa
atttcaattgacagagttcttcattctgaagctcgtaaagaaacagaagttgaaagactt
gtacgtttgggtgtgatgacaccatttggtagcacagttgaaaaatatgacagtgatgct
gagacattcaattctagcaggagtgatggtaccaagtgtggtgacaatgctggtacctcg
gatgatgctggtagaatgaaactagatggaactaagagcaatcttaaacagattgatacc
aatgaagatgaggcccttctttcgtcagaccctgacattgaaatcaatgaacccacagtt
gacagtgacgaagaatatatccctaatgaggacgatttaaagcttagttttcaagatgat
gaacatgtcttgcccgaagatgacctggaagaaccaattggggaggcttccatggcaacc
aataaagtgcaaattcctcagaacaaagctggtaaaaagagtaaaagaatgacgcagtct
gtgaaggatgatggtgatgatagggcatacaagatcagaattagggagttcaaatttaag
aaatcattgcgagagaaaggcattgattatgaaggtcgagatgaggaggaaaacagcttc
tgggatgaagagggaccagatgaagaatttgatggtggcttaaagattccttctgttatc
tggaacaaactattcagctaccaaaagactggggtgaagtggttatgggagctgcacacg
caacaagctggaggaatagttggagatgaaatgggtctgggaaagacaattcagattatt
gcattcctagctgggctaaagtacagtaatattggcagacggggttcaaagcagaatggt
tttggaccagttctcataatatgtccagcaacaattctgtttcaatgggtggctgaattg
cacaagtggtggccagagtttcgtgttgcagttttgcatgacactggttcatacaaggga
cccaaggacaccctgataaccagaatccgcaacgaaccagggattctgctgaccacatac
tctggtgtgagaataaaccaagatcatctgttgcagtcccgttgggattacatcatttta
gatgaaggtcataccatacgtaacccagatgctgaggtcacgttaacttgcaaacagttt
cgcactccgcatcgtctagtgttgtcaggatcaccaatgcagaacaaccttcgtgaactc
tggtccctcttcgattttgtttatcctggcaagctgggaacgttacctgtgttcatgcaa
gagttctcagtgccaatcaccatgggaggatattcaaatgccacaccggttcaggtacag
acagcgttcaaatgtgcgtgtgttttgagggacacaatcaatccgtatttattgagaaga
ttgaagaaggatgttaaaaagaaattggatttaccaaacaaaaacgaacaggtactgttt
tgtcgccttactgaggaacagatagaattgtacaaagaatatttggcttcacgtgatgtg
ggatctattttgtccggaaatatgaaggttttccctggtctgataatgttgcggaagatt
tgcaatcatcctgacctaaccaccccggccggctctttgttgaaactacgaaaagacgaa
gcgcagcaggaaaatacggataagtgtcgcgagaaaaatgacagcgaatacgggcattgg
aagcgagccggcaaactcattgttgttcattccttactcaagctgtggaaaaaacaaaag
cataaagtattgcttttcacacaaacacggcagatgttgaaaattcttgaaatatttgtc
aaatctcaaggctataatttttgcagaatggatggatcaacttcaatctcatctcggcag
ccgttgatagagaaatttaataaggattcgtctatttttgtgttcctcctgacaacccgt
gttggtggcctgggcgtgaacttgatcggtgcgaatcgcgtgatcatatacgacccagac
tggaatcctggtaccgacatgcaagcgcgggaacgcgcgtggcgagtgggacagagaaag
gatgtcacgatttatcggttgttgaccactggcactattgaggagaagatttaccacaga
caaatattcaagcagtttttgacaaatcgtgttttaaaagatcccaaacaacgacgtttc
ttcaaatcaaatgatctgtttgagctgttcacgttggacacgtcagacaactcgaagtct
ggaactgaaaccggcgccatatttgcaggtctcggctgtgaggtcgctgttcccgccaaa
aagaaaggaacaaagcggaagcacagcgtaggcgataaaaatgttttaaaagctatacaa
gaacggacgaaggaaatacttctgacccagttcgcgtcttcgaaggagagctgtgttcaa
gagaggaacgaaatggcggacactgaaaaagaaggggaaaatgttcaaagaaatctgaat
gagcaaagttgtgatggagtgaaattcgagagcaaaataaacaatgagaaattgatcgag
acatcggaagagcgggaaagtttcggggatgcatcggaatgcactcgtttacctacgacg
aacaatccgtcgatcaccggtgaaagttcggaaaaagctactggcgggaaaatgtcgtcg
agcgagaacgctaaggttgatgacgttgagaagactgggtctagggaaagttctttaaat
gataaaatgacgaaatcatcacgaaagaaaagcaagaaaaggaaaagaaataaagtggaa
gggatgcatattggtcaactgagtcattccgaaccataccgtccaaggcaagggcctgaa
gacgttcccgataaaaatgctgatgatgattacattttaagaaagttattcaaaaaatca
ggtgttcacagtgcacttcaacatgacaccattgtgaattcgggcaatgcagatcatgtt
ttggtggaaaacgaggctaaacgagtggccgctcaggcagctgaggctgtgaaacgttca
cgtgaccattgcctgcaactcagaaacactggtctacctacatggactggacagtcaggt
gttgttggttcgccatatggaatgcaggaaagaaccttgtttggtccaaaggcgaagaaa
gttgaaaagaaggaaaattctacaaccttattcactggcaagtctttattgcaaaacgaa
aaggagagtgatttgacaaaaccaggtctcgggagccctatgtcctcaacgcaattacta
gcccgcatgagagcacgcaattctattggtggaacaaacgccggaagtgacgtacaatct
agcgaacaaaaattggtggcgatcgaaggtggacagcaagatcgaagctcagcaagattg
aagattgttcgaggaagaaggagttcgccgttgactaaaaggtttatctga
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