Dendronephthya gigantea (soft corals): 114519524 Help Entry 114519524         CDS       T06112                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism dgt  Dendronephthya gigantea (soft corals) Pathway dgt03030   DNA replication dgt03410   Base excision repair dgt03420   Nucleotide excision repair dgt03430   Mismatch repair Brite KEGG Orthology (KO) [BR:dgt00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     114519524    03410 Base excision repair     114519524    03420 Nucleotide excision repair     114519524    03430 Mismatch repair     114519524  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:dgt03032]     114519524    03400 DNA repair and recombination proteins [BR:dgt03400]     114519524 Enzymes [BR:dgt01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      114519524     6.5.1.6  DNA ligase (ATP or NAD+)      114519524     6.5.1.7  DNA ligase (ATP, ADP or GTP)      114519524 DNA replication proteins [BR:dgt03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     114519524  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      114519524 DNA repair and recombination proteins [BR:dgt03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      114519524    NER (nucleotide excision repair)     Other NER factors      114519524    MMR (mismatch excision repair)     Other MMR factors      114519524 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  114519524 NCBI-ProteinID:  XP_028395470 LinkDB All DBs Position Unknown AA seq 919 aa AA seqDB search MPQRSIASFFSSKPKVKESNNEQKDCGKSRKSSEESSIKDETLPGADQFSPIKKTKKSSK KILVDSDEEDQLNGKGDQANGDKECKNGSSTDEGLRSAEESKEVKRTEEPKSCSPNEIPK RKTARKHMRKRKADEDSSSNSDDHKTVKKSKTSDNTETSIKSEPMDTDENKPETKNEESS EVKSEKGQTDIKSEEDKTDMEDEVKSEVKEGNNNKVDTVDKDSSSPKPKKTFHSFFGKPS SKSEATKTEDASSNGEIVDSREYNPEKNTYHPIKHACWKHKERVPYLALARTFQSIEDTS ARLKITSTLCNLFRSVIALTPDDLLPTLYLCLNKLAPAYEGIELGIGDGVLIKVIAEATG RSSQQVKSEFAEKGDLGIVAEASRSTQRTMFTPAKLTIVTVYNKLKDIAMMTGHSSVNRK VDKVKSMFVACRQSEARYLTRSLAGKLRIGLAEQTVLTALAHAVVFTPPSKDFPPEVLDA SKGLSAESFKKKLDEAALCIKTCYCELPNYNLLIPALLQHGWRELPEHCHLTPGVPLKPM LAHPTKGVDEVFKRFEDASFTCEYKYDGERAQIHVLNNEDIRIYSRNQENNTTKYPDIIA RMSKVLKENVQSCIIDSEAVAWDPEKKQILPFQVLSTRKKKDANASEIKVQVCIYAFDLL YLNGKSYVKEPFKVRRELLRSSLNEIEGGFIFAKCITSTDTDDIAEFLDESIKGNCEGLM VKTLEVDATYEIAKRSHNWLKLKKDYLEGVGDTLDLLVMGAYMGKGKRAGRYGGFLVACY DEEKEEFQSCCKVSTGLKDEDLEAQYNLFQEHIIAKPKPYYRFDQSLEPDVWFDAIKIWE VKCADLSISPVHKAAAGIVDSEKGISLRFPRFIRVREDKKPEQATSSVQVAEMYRNQDTV KNNQAASSVNAGDDLDDFY NT seq 2760 nt NT seq  +upstreamnt  +downstreamnt atgcctcaaagaagcatagcgtcgttcttttcatcaaaacctaaggtcaaagaaagcaat aacgagcaaaaagactgtggaaaatcaagaaagtcctcagaagaatcgtcaataaaggat gaaacattgcctggtgcagatcaattttcccctattaaaaagacaaagaaaagttcaaaa aaaatactggttgacagcgatgaagaagaccagttgaatggaaaaggtgaccaggcgaat ggtgataaggaatgtaaaaatggtagttcaacagatgaaggcttgagatcggctgaagaa agtaaagaggttaaaaggacagaagaaccaaagtcatgtagtccaaatgaaattccaaaa cgtaaaactgcaagaaaacacatgagaaagaggaaggcagatgaagatagttcatcaaac agtgatgaccataagactgtaaagaaatcaaagacaagtgacaatacagaaacctcaatc aaatctgaaccaatggacaccgatgaaaataaaccagaaacaaagaatgaagagagcagt gaagtaaaaagtgaaaaaggtcaaactgatataaaaagtgaagaagacaaaactgatatg gaagatgaagttaagagtgaagttaaggaagggaataataacaaagttgacactgtagat aaagacagctcatctcctaaaccaaaaaagacgttccacagtttctttggaaaaccctct tcaaagtctgaagcaacaaaaactgaagatgcctccagcaatggagaaattgttgactct agagaatataaccctgaaaagaacacttaccatcctataaaacacgcctgttggaaacac aaggaaagagtcccttatttagctctcgccagaacctttcaatcgattgaagacacatca gccaggttgaaaattacatcgactttgtgcaatctttttcgctcggtgatagctctaacc ccagatgatctgctaccaactttatacctctgcttaaataagcttgcgccagcctatgaa ggtattgaacttggtattggtgatggtgttttgatcaaagttattgcagaagctactggt cgcagttcccaacaagtcaaatctgaatttgcagaaaagggggatcttggaattgttgct gaggccagtcgttcaacacagcggacaatgttcacccctgccaaacttaccattgttaca gtttacaacaagttaaaagacattgctatgatgactggacattcatcagtcaatcgtaaa gtggacaaagtgaaaagtatgtttgtggcgtgtcgtcaatccgaggcgagatacctaaca agatccctcgcgggcaaactccgtatcggactagcagaacaaactgtcctcacagctttg gcgcatgctgtcgtcttcacccccccgagcaaagattttcctcctgaagtattggacgcc agtaaaggtttatctgccgagagttttaaaaagaaactcgatgaggctgctttgtgtatc aagacgtgttactgcgagttgccaaattacaatcttcttattcctgctttgcttcaacat ggttggcgagaattaccagagcattgtcatcttacaccaggtgttccattaaaaccgatg ttggctcatccaacgaaaggtgtagatgaagttttcaaaagatttgaagatgcttcattc acttgtgaatataaatacgacggagagagagctcagatccacgttttgaacaacgaggat attcgcatttatagccgtaaccaggagaataacaccacgaaatatccggatattattgca agaatgtcaaaggtcctaaaagagaacgtgcagtcgtgtattattgattcagaggccgtc gcgtgggatccggaaaagaaacagattttgccatttcaagttttaagcacaagaaaaaag aaagatgccaatgcttcagagataaaagttcaagtgtgtatttacgcgtttgacttgctt tatttgaatggaaagtcttatgtcaaagagcctttcaaagtcagacgagaattattgagg tcttcactgaacgagattgagggcgggttcatctttgcaaaatgcataacatccacagac acagacgacattgctgaattcctggacgagtctatcaaaggaaactgtgaagggttgatg gtaaaaacgctggaagttgatgccacatatgaaatagctaagcgatcacacaactggtta aagttaaagaaagactatcttgaaggtgttggcgatacgctggatcttcttgtgatggga gcatatatgggaaaaggaaagagagctggtcgttatggcggctttctggtcgcttgctac gacgaggaaaaagaagaattccaatcctgctgcaaagtcagcactggtttaaaagatgaa gatctagaagctcagtataacctatttcaagaacatattattgcgaaaccaaaaccttat tatcgtttcgatcaaagtcttgaacctgatgtttggtttgatgcaatcaagatttgggag gtaaaatgtgctgacctctcaatctctcccgtccacaaagccgcagctgggattgttgac tctgagaaaggaatctcgttgcgtttcccaagattcatccgcgtacgagaagacaagaaa ccagagcaagccacgtccagcgttcaggtggcggaaatgtacagaaatcaggacacagta aagaacaatcaggccgcatcaagcgtcaacgctggcgatgaccttgacgatttctattaa

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