Dendronephthya gigantea (soft corals): 114519656
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Entry
114519656 CDS
T06112
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114519656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgt03021
]
114519656
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114519656
Transcription machinery [BR:
dgt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114519656
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114519656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_2
zf-CCCH_4
zf-CCHC_2
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
114519656
NCBI-ProteinID:
XP_028395627
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MRFLTMLAVVAGVDDIVFDVETALSQQLGTQPLPFPGMDKSGAAVCEFFLKNNCNRGSYC
PYRHTKGEKTIVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYTKFGECMNKECQYLHV
DPESRMRDCPWYDRGFCKHGPHCRHRHVRRVLCVNYLCGFCPEGKQCKFMHPRFELPVST
DYPDIMMKKVICHRCFQPGHKISTCPLNVQPTVPTAPGMIPTFHNPHFNPAPPTANVQIQ
IQPTTDGLNPPRMPWRPLETVTCFKCGEKGHYANKCLKSKADILKA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttctaacaatgttggcggtcgtagcaggtgtggatgatatcgtatttgatgtc
gaaacagcgctatcacagcaattgggcactcaaccattgcctttcccagggatggataag
tcaggtgctgcggtatgtgaattctttcttaagaacaactgcaatcgaggcagctactgt
ccctatcgacacacaaaaggagagaaaacaattgtctgtaaacattggttgagagggtta
tgcaagaaaggggaccagtgtgagtttctccatgaatatgatatgtcaaagatgcctgag
tgctatttctacacaaaatttggtgaatgtatgaacaaggaatgccaatatcttcatgtt
gatcctgagtcacgaatgagagactgcccttggtacgaccgaggattctgtaaacatggt
cctcattgtcgtcatcgacacgtcaggagagttttgtgcgtcaactacttgtgtgggttt
tgtcccgagggaaaacagtgcaagttcatgcatccaagatttgagctgccagtgagcaca
gattatccagacatcatgatgaagaaagtgatctgtcatcgatgtttccagccaggacat
aaaatatcaacatgtcctttgaatgtgcaacccacggtaccaacagcaccaggcatgata
ccaacctttcacaatccccattttaatccagccccaccaactgccaatgttcagatccaa
atacaaccaactacagatggactgaatccacccaggatgccttggagaccactggaaact
gtcacatgtttcaagtgcggcgaaaagggtcactatgccaacaagtgtttaaaatcaaaa
gctgatatcctcaaagcctaa
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