Dendronephthya gigantea (soft corals): 114520046
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Entry
114520046 CDS
T06112
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114520046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgt03021
]
114520046
Enzymes [BR:
dgt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114520046
Transcription machinery [BR:
dgt03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
114520046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Zn_ribbon_IS1595
DUF5733
Motif
Other DBs
NCBI-GeneID:
114520046
NCBI-ProteinID:
XP_028396050
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MAANMRIQDLADNSDVSKEKSLPSLKNLTSPEYSKLSNEQYKTVQDLYLPHIESFNFLVD
EGLGLAVQDIFPQEFELPNGQKASVYFTGASIGTPMVPEGNIHSKSLRVFPAECRQRSTT
YNAKLQVSLQWKVNNQICGNVAKVIAMLPVMVKSKCCSLFGLGPKDLVANHEEAEEGGGY
FIINGIEKVIRMLVMPRRNYPLAITRSSWRKRGPLYTEYGIQIRCVQKDQTGNTMVLHYL
TDGTCSLSFTYNKEQFFMPVMFMLKALYETTDQQIYKELTKGQESNTFLKDCIATMLRQT
QDQDITTQTKILNYIGERFRVKLGLPQWYNNVSAAKFLIRKCICIHLDSYLDKFNLIVFM
VKKLYAFALEKCAVESADNPMNQEILLGGHFYLMVLKEKLEVWLTSLKFALEKDIKKNPS
KFTLNSTSLLKNMAHCFNLTNQMEYLLATGTLRSKSGLGLMQIAGYSVVADKLNYYRYLS
HFRCVHRGAFFAQMRTTSVRKLLPEAWGFLCPVHTPDGAPCGLLNHLAAMCEVVNVSPQT
SHLPRLLCSLGMTPLDCPTSAPVPSCYPVLLDGRVLGYVEEQLANDLVKRLRIMKVEQLE
QVPKHLEVCLVPFTKTASQYPGLFLFTTPARMTRPLLNIAAGKPEMIGTFEQVYLDVAIV
PDEVHEGITTHMEIKQTGFLSTVASLTPYSDFNQSPRNMYQCQMGKQTMGTPCHAFPFRS
DNKLYRIQTPQSPLVRPKAHDEFNVDNYPVGTNAIVAVISYTGYDMEDAMILNKSSFERG
FAHGTVYKTEVVDLAKYASDPRNVNLRFGCLPDDSRVSGKLDKDGFPPIGTKLENGDPCY
CYIDLTTGDAKVKYYHYMEAAYLESVKFLGNDSGDGELQRVSLKWRIQRNPIIGDKFSSR
HGQKGICSQKWPAENMPFSESGMTPDIIFNPHGFPSRMTIGMMIESMAGKSASMHGLVHD
ATPFTFSEDNSAIDYFGKMLIEAGYNYFGTERLYSGITGKEFEADIFFGIVYYQRLRHMV
SDKYQVRATGPIDALTHQPVQGRKRQGGIRFGEMERDALLAHGTSFLLQDRLMNCSDRSE
GHVCSKCGSLLSPIFDKPASEMAAVASNVTRKWSCKSCETSEHIKVLSLPYVFRYLVAEL
GAMNIKVSLDVK
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaatatgagaatccaggatttagctgataattctgatgtatcaaaagaaaaa
agtttgccttcgctaaaaaatctcacttcacctgagtacagcaagctcagcaatgaacag
tacaagaccgtccaagatttgtatttaccgcatatcgaatcattcaattttcttgtggat
gaaggattgggcttagctgtgcaggatatctttcctcaggaatttgagcttccaaatgga
cagaaagcatcagtttactttactggagcaagtattggaacaccaatggtaccagaagga
aatattcactcaaaatcattgagagtttttcctgcagagtgtagacaaagaagtacaaca
tacaatgctaaactacaggtatctctccagtggaaagtaaataatcagatctgtggaaat
gtggccaaagtcatagcaatgttgccagtaatggtgaagtccaagtgttgctcattgttt
ggtttgggtccaaaagatctggttgctaatcatgaagaagctgaggaaggtggtggctat
ttcattattaatggtattgaaaaggttattcgaatgttagtgatgcccagaaggaactat
cctcttgcaattactcgatcatcatggcggaaacgcggacctctgtataccgaatatggc
attcaaattcgttgcgtacagaaagaccaaacaggcaatacaatggtacttcactatctt
actgatgggacatgttctctctcctttacatataacaaagagcaatttttcatgccggtt
atgttcatgttaaaggctctgtatgaaacaacagatcaacaaatctacaaggaacttact
aagggtcaagaatcgaacacgtttttaaaagattgcattgcaacgatgctgagacagaca
caagatcaggatataacaacccagacgaagatattgaattatataggtgagcgatttcga
gtgaaattaggtcttcctcaatggtataataatgtttcagctgctaaatttctaattcgg
aaatgtatctgtattcacttggattcttatcttgacaaatttaaccttattgtgtttatg
gtaaagaaactttacgcttttgcacttgagaaatgtgcggtggaatcagctgataatcca
atgaatcaagaaatacttcttggggggcatttttatctgatggtgttaaaggagaaattg
gaagtttggttgacttccttaaaatttgctttggagaaagatatcaagaagaacccaagc
aaatttaccttaaattcaacttctttactgaaaaatatggctcattgttttaacttgacc
aaccaaatggaatatttattagccactggcactctaagaagtaaatccggactgggatta
atgcagattgctggttattcggtagtggcagataaactcaattattacagatatctctcc
cattttcgttgtgttcaccgtggagctttctttgctcagatgagaacaacatctgtgaga
aaacttcttcccgaagcctggggatttctgtgtccagttcacaccccagacggagccccc
tgtgggctattgaatcatttagcggctatgtgcgaggtggtgaatgtatcacctcaaacc
tcgcatctcccccggctgttatgttcacttggtatgacccccctggactgtccgacttca
gcgcctgtgccgtcgtgttacccagtcttattagatggtagggtattaggttatgtggaa
gaacaattggccaatgatttggtaaagagactaagaataatgaaagttgaacaactggaa
caggttcccaaacatttggaagtttgtttagttcctttcactaaaacagcaagtcagtat
cctggtctatttttattcaccactcctgcgcgaatgacgaggccgttattaaatatcgct
gctggaaaacctgaaatgattggaacattcgaacaggtatatcttgacgttgcaatagtt
ccagatgaggttcatgaagggatcacgacacacatggagataaaacagactggattcctc
agcactgtcgcaagtttaacaccatattcagattttaaccaaagtcccaggaatatgtat
caatgtcagatgggaaaacaaacaatgggaacaccatgtcacgcgtttccgtttcgtagc
gataataaactttatcggatacagactccccagtcgccattagttcgcccaaaagctcac
gatgagtttaacgttgataattatcctgtgggaacaaatgcaattgtcgctgttatatct
tacacgggttatgatatggaagatgccatgatattaaacaaatcttcgttcgagcgtggc
tttgctcatggcacagtttacaaaaccgaggtcgttgatctggcgaaatatgcgagtgat
cctcgaaatgtcaatcttaggtttggttgtttaccagatgatagcagagtttcaggaaaa
ctggataaagatggttttccaccaattgggacaaagctagagaatggtgatccttgttat
tgttatatcgacctgacaactggtgatgcaaaagtaaaatattaccattacatggaagcg
gcatacttggaatccgtgaaatttcttggtaatgatagcggtgatggtgagttacaaaga
gtatctttgaagtggagaatacagagaaatccaatcattggtgacaagttctcaagtcga
catgggcagaaaggtatctgtagtcaaaagtggccagcagaaaacatgcctttctcagaa
tctggaatgacgccggatattatttttaatcctcacggctttccatcacgtatgactatt
ggaatgatgatcgaaagtatggctggcaagtcagcgagcatgcatggtttggtacatgac
gctacaccattcacattttctgaagataattctgccattgattatttcggtaaaatgtta
atagaagctggctacaattattttggaacagagcggctttatagcggtataacaggcaaa
gaatttgaagcagatatattctttggtattgtttattatcaacgtttacgtcatatggtc
tcggataaatatcaggtgcgtgcgactggtcctattgatgctcttactcatcaacctgtt
caaggcagaaaaagacaaggaggaattcgttttggtgaaatggagcgcgatgctttactt
gcccatggaacttcatttcttttgcaagatagattaatgaactgttcagatcgttctgag
ggccatgtatgttcaaagtgtggaagtctgctatcaccaatttttgataaacctgcatca
gaaatggcagctgttgcatcaaatgtcacaagaaaatggagctgtaaaagttgtgagacg
agtgaacatataaaagttctttctttaccctatgttttccgataccttgttgctgaactc
ggtgctatgaatattaaagtatctttagatgtgaagtga
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integrated database retrieval system
