Dendronephthya gigantea (soft corals): 114520476
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Entry
114520476 CDS
T06112
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114520476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dgt03041
]
114520476
03110 Chaperones and folding catalysts [BR:
dgt03110
]
114520476
04121 Ubiquitin system [BR:
dgt04121
]
114520476
Enzymes [BR:
dgt01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
114520476
Spliceosome [BR:
dgt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
114520476
Complex C
U4/U6.U5 tri-SnRNP related factors
114520476
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
114520476
Chaperones and folding catalysts [BR:
dgt03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
114520476
Ubiquitin system [BR:
dgt04121
]
Ubiquitin ligases (E3)
U-box type E3
114520476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
Med2
zf-Nse
DUF6366
Motif
Other DBs
NCBI-GeneID:
114520476
NCBI-ProteinID:
XP_028396553
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MGKRQHQKDKLYITNKEWRTEWGGKDSGSDVGAKAAFRRLPFYCCSLSLQPFANPYCTKE
GVVFDLLSIVPFIKKFGKNPVNGEPLEMKNLIKLNFHKNSDDKYHCPVTYKVFTQNSHIV
AVKTTGNVFAYEAVDQLNLKTRNFKDLLTDEPFTRKDIITIQDPTNLDKFNLASFHHLKN
NLTIIDEGETKAMQDPMYHIRKTNTTTESILNELNKTYKEPESKASSSSSKADSRNAAPY
STGMMGASLTSTARVPVTKQEAAIIDEDVLRYREVKKKGYVRLTTNMGDLNLELHCEMVP
KTCENFLKHCASGYYTDTTFHRSIRNFMIQGGDPTGTGRGGESAWGPAFKDEFKPNLTHT
GRGILSMANSGENTNKSQFFITYRSCRHLDNKHSVFGRVVGGMDTLSKMEKVECDEKDRP
KELITITNVSVFVNPFEEIDEKLKEVKEKEEEERKRVEEEERKQNTTSALETQMTVHRSG
VGKYIPKVASNIEDSPPQPAKKKVKKSSGFGDFSSW
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagagacagcatcagaaagataaactgtatattactaacaaagaatggagaact
gaatggggtggaaaagattctgggagtgatgttggtgccaaggcagcattcagaagatta
ccattttattgttgtagtttgtcattacagccatttgctaacccatattgcacaaaagaa
ggtgttgtttttgacctgttgagtattgtaccatttatcaagaaatttggcaaaaaccca
gttaatggagagcctttagaaatgaaaaacttgatcaaattgaatttccacaaaaacagt
gatgataaatatcattgcccagtgacatataaagtgtttacgcaaaatagtcacattgtt
gctgtgaaaactactggtaatgtctttgcatatgaggctgtagatcaattgaacctgaag
acgagaaactttaaagacttgctgacagatgaaccattcacacgtaaagatattattaca
atccaggatccaaccaacctggataaatttaatcttgcttcatttcatcatttgaaaaac
aacttgacaataattgatgaaggagaaaccaaagcaatgcaagatccaatgtaccatata
agaaagaccaacacaacaactgagagtattctaaatgagttgaacaaaacatacaaagaa
ccggaaagcaaagcttcttcctcttcttcgaaagctgactcacgaaatgctgctccttac
tcaactggtatgatgggagcttctctcacatcaactgctcgtgttcctgtgacaaagcaa
gaggcagcaatcattgatgaggatgttttacgatacagagaagtgaagaagaaaggctat
gttcgtttgacaacaaacatgggggatttaaatctggaacttcattgtgaaatggtccct
aaaacatgtgaaaactttctaaaacactgtgcatcgggatactacactgacactacattt
caccgatcaattcgaaattttatgatacaagggggtgatccaactggaacaggaagggga
ggagagtccgcgtggggtcctgcattcaaagacgaatttaaaccgaacttaactcacaca
ggtcgcggtatcttaagtatggcgaactctggggaaaatacaaacaaatctcagttcttt
ataacctaccgttcttgtcgccatcttgacaacaaacattcagtttttggacgtgtcgtt
gggggaatggatactttaagcaagatggaaaaagtcgaatgcgatgaaaaagatcggccg
aaagaattgatcacaatcacaaacgtgagcgtttttgtgaatcctttcgaagaaattgat
gaaaaattgaaagaagtgaaggaaaaagaagaggaggaaagaaaacgagtggaagaagag
gaaagaaaacaaaacacaacttctgctttggaaactcaaatgacggttcatcgatcagga
gttggcaaatatataccaaaagttgcaagtaatatcgaagacagtcccccgcaaccagcc
aaaaagaaagttaaaaaatcttcaggatttggtgatttcagttcatggtaa
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