Dendronephthya gigantea (soft corals): 114520508
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Entry
114520508 CDS
T06112
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03040
Spliceosome
dgt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114520508
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114520508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dgt03041
]
114520508
04121 Ubiquitin system [BR:
dgt04121
]
114520508
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114520508
Enzymes [BR:
dgt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114520508
Spliceosome [BR:
dgt03041
]
Complex B
Other components
Prp19 complex
114520508
Complex C
Prp19-CDC5 complex
114520508
Ubiquitin system [BR:
dgt04121
]
Ubiquitin ligases (E3)
U-box type E3
114520508
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
114520508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_TEP1_C
NBCH_WD40
U-box
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_2nd
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_SPT8
Nucleoporin_N
Beta-prop_DCAF12
RMC1_N
zf-Nse
B-prop_COPA_B_2nd
ATG16
Motif
Other DBs
NCBI-GeneID:
114520508
NCBI-ProteinID:
XP_028396598
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MALTCAISNEVPEHPCVSPSSNCVFERRLIEKYIAENGVDPISNDVLSEEQLIDIKVSPL
VKPKPPSATSIPAILKSLQDEWDATMLHSFSLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGIVAMAPTPVAPAIPNVNHDEPMEVKVGDEGGMTDDVLQKLQ
DKATTLTAERKKRGKKVPEGLATVDEIQSYKQISSHLGLHSASNPGILALDLHAADTSRV
LTGGLDKNAVVFHRETEQVVATLKGHSKKVTSVVYHPTEDIAFTASPDSTIRVWSVGTAS
CTEIVKAHDAAVTGISLHATGDYLLSCSLDQHWAFSDIRTGRVLTKCVSDVSSTQSLTCA
QFHPDGLIFGTGTTDSVIKIWDLKERANVANFPGHSGPITSISFSENGYYLATSADDSVV
KLWDLRKLKNFKTIALEDRYEVKSLCFDQGGVYLAVAGSDVQIYMVKQWELLKTFTDHSG
VATGVKFGKNAGFIASTGMDRNLKFYA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcacttgtgcaatcagtaacgaggtaccagaacacccttgcgtctctccctca
tcaaactgcgtgtttgaacgaaggctaattgaaaaatacatagcagaaaatggtgttgat
ccaatctcaaatgatgttctatctgaggaacaactgatcgacatcaaagttagtccattg
gtaaagcctaaaccaccttcagccacaagtattcctgccattttgaagtcgctgcaagat
gaatgggatgcgacaatgttgcacagtttcagcttacgacaacagcttcaaaccgctaga
caagaattatctcatgccttgtaccagcacgatgctgcctgtcgggtcattgctcgtttg
actaaagaagttactgcagccagagaagcattggccactctgaaaccacaagctggtatt
gttgcaatggcgccaacaccagtggctcctgcgatccctaatgtgaaccatgacgaaccg
atggaagtcaaggttggtgatgaaggaggaatgacagatgatgtcttacaaaagctgcaa
gacaaagccaccactctcacagcagagcgtaaaaagagagggaaaaaagtcccagaaggt
cttgcaactgtggatgagatccaatcctacaaacaaatctcttctcatctgggtcttcac
agcgccagcaacccaggaatcctggcattggatcttcatgctgccgatacatccagagtt
cttacaggtggtttggacaagaatgcagttgtgtttcatcgtgaaacagagcaggttgtt
gcaactctcaaaggacattcaaagaaggttacaagtgttgtttaccatccaacagaggat
attgccttcactgcctcaccagacagcaccattcgtgtttggtcagtcggcacggcaagc
tgtactgaaattgtaaaggctcacgatgctgctgtcacaggaatcagtctgcatgctact
ggtgactacttactgagttgttcactggaccagcattgggcattctctgatattagaact
ggccgagttttgacaaaatgtgtatctgacgtatcctccacacaatcattgacctgtgca
caattccatcctgatggtttaatctttggtactgggacaacggacagtgtgatcaagatt
tgggatttgaaggaaagagcaaatgtggccaacttcccaggtcattctggaccaatcacc
agcatatctttctcagaaaatggttattatctggcaacatcagccgatgattctgttgtg
aaattgtgggatttgaggaaattgaagaactttaagacaatagctttggaagatagatat
gaggtgaagtctctttgctttgaccaaggtggtgtttatctggcagtcgctggttctgat
gtccaaatctacatggtgaaacaatgggagctcttaaagaccttcacagatcattctggt
gttgcaactggtgttaaatttggcaagaacgctggatttattgcatccacaggaatggac
agaaatctgaaattctatgcttga
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