Dendronephthya gigantea (soft corals): 114520740
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Entry
114520740 CDS
T06112
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dgt03009
]
114520740
Enzymes [BR:
dgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114520740
Ribosome biogenesis [BR:
dgt03009
]
Eukaryotic type
90S particles
Helicases
114520740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
114520740
NCBI-ProteinID:
XP_028396880
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MPGRMKWSLHEVLIKSNMVDAFDLFRRLSFGAKFDKKRVENSFKRLEGEDENVLDGKQNV
ADAVDFFGYRNLNENASEQVAVEQEITQYKTKKKVKDGGHGEDGNKKRVKKRKRAVEEND
HSELVSKGKSRKKKEKHSIEKLSELQREKVNAFRNKHHIYVNGSDIPDPIECFTDLDSQY
ALPHYLLNNVLESGYAQPTPIQMQAIPLLLQNRELLACAPTGSGKTAAFILPILYHLKEP
RKCGFRCVVVSPTRELAQQIYREFCRLSKGKALRIHILTKAKANANNFGPKSSKRFDILV
TTPNRLVHMLQQDPPAVNLEGVEWLIFDEADKLFEEGKDGFRDQIATIYQACSNPKIRRG
LFSATLSNGIEEWTRVHLDNAVRITIGVRNSATDTVEQELLFVGQESGKLIAIRDIIQKG
FEPPMLVFVQSKDRAKELFHELIYDGINVDVIHSDRTQSQRDNIVKCFRTGKIWVLICTE
LMGRGIDFKGVNLVINYDFPTSSVAYIHRIGRTGRAGRTGKAVTFFTEDDVVNLRSIANV
IKSSGGEVPDWMLQIKKAPRKSKQKLSKVPVKRSSIKTVTKYDLNKAKKRREMIKSSKRK
GKTKTEDDSYQE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggagaatgaagtggagcttacatgaagtattgataaaatccaatatggtggac
gcatttgatctttttcgtcgtttgagttttggagcaaaattcgacaagaaaagggttgaa
aatagttttaaaagactcgagggtgaagatgagaacgtgctggatgggaagcagaatgtt
gctgatgctgtcgacttttttggctatagaaacctgaatgaaaacgcatcagaacaggtt
gctgtagagcaagaaattactcaatataaaacaaagaagaaagtaaaagatggtggacat
ggtgaagatggtaacaagaagagagttaaaaagagaaagagagctgtagaggaaaatgat
cattcagagttggtctccaaagggaaaagtagaaaaaagaaagaaaaacacagcattgag
aaactatctgagttacagagagagaaggtgaatgctttcagaaataaacatcacatttat
gtaaatggttctgacattcctgatccaattgaatgtttcactgatcttgattcacagtat
gcattacctcactatcttctcaacaatgttttggagtcgggttatgcgcagccaactcca
attcaaatgcaagcaatacctttactattacagaaccgagagctgttggcttgtgctcca
actggatcagggaaaactgctgcatttattctgccaattttgtatcacttgaaagaacca
aggaaatgtggttttcgctgtgtcgttgtttcacccacaagagaactagcacaacagatc
tatcgagagttttgtcgcttgtcaaaaggaaaggctttgaggatccatatcctaacaaaa
gcaaaagcaaatgcaaataactttggaccaaaatcctcaaaacgttttgatattttggtc
acaacccccaacagactggtgcacatgctgcagcaggacccccctgctgtcaatcttgaa
ggcgttgaatggttgatttttgatgaagcagacaaactcttcgaagaggggaaagatggc
tttagagatcagattgctacaatatatcaagcatgctccaacccaaagatcaggagggga
ttgtttagtgcaactctgtcaaatggtattgaggaatggaccagagtacacttggataat
gcagtgagaattactataggagtaaggaattcagcaacagacactgttgagcaagaactg
ttgtttgttggacaggaatctgggaaacttattgcaattcgagatattatccaaaagggt
tttgagcctccaatgttagtatttgtgcaatcaaaagacagggcgaaggaactttttcat
gaattgatttacgatgggatcaatgtggatgttatacactcagataggacacagagtcag
agagacaacatagtgaaatgttttagaactggaaagatctgggttttgatatgtacagaa
ctcatgggccgtggtatcgactttaagggagtgaatctagtcatcaattatgattttcca
acgtccagtgttgcatacattcacagaattggtcgaactgggcgagctgggagaacggga
aaagctgtgaccttctttaccgaagacgatgttgtgaacttgagaagcatagcaaatgtt
atcaaatcgtctggcggggaggttcctgactggatgttgcagatcaagaaggcaccaaga
aaatcgaagcagaagctttcgaaagttccggtgaagcgatccagcattaagactgtgaca
aaatacgatttgaacaaagcgaaaaagagaagagagatgattaagagttcgaaacgaaaa
ggaaagacgaagacagaagatgacagttaccaagaatga
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