Dendronephthya gigantea (soft corals): 114521307
Help
Entry
114521307 CDS
T06112
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114521307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114521307
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114521307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114521307
NCBI-ProteinID:
XP_028397499
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
MAADFKAAQPLEYYRRFLEEDIRPDGRNLLQFRNTVINIGSIATAEGSSIVKLGNTTIVC
GIKAELANPNPEHPKKGFIVPNIDLPPLCCPRFRPGPPSEQAQVLSQFIADTVLNSEMID
LEELCILEGQLVWCLYVDLVCLNYDGNIADASMIAFLGGISNTRLYEITINEETNTPEPS
ETNEIPLNVKQQPIASTFAIIDNSVISDPTDDEESLATGVMTIVVTSEGNVCSVHKPGGT
PLPSDVLVKKCTNEAKKRAKSVQKLVNTALQEIS
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagattttaaggccgcacagcctttggaatattacagaaggtttttggaggaa
gatattcgacctgatggcagaaatttgcttcagtttcgaaatactgtcatcaatattgga
tcaattgcaactgcggaaggatcgtctattgtaaagttggggaatacaaccatagtttgt
ggaattaaggcagaattggctaatccaaatcccgaacacccaaagaaaggtttcatagtt
cctaatattgatctacctccattgtgttgtcctcgttttcgtcctggacctccgagtgaa
caagcccaagttttaagtcagtttattgccgatactgtattaaattcagagatgatcgac
ctggaagaattatgtattctggagggtcagcttgtttggtgtttgtacgttgatcttgtg
tgtctaaattacgacggaaatatagccgatgccagtatgattgcgtttcttggtggtatt
tcaaacacgagattatatgagattacaatcaacgaagaaacaaataccccagaaccaagt
gaaacaaacgagataccattgaatgtgaaacaacaaccaatagcttcaacgtttgctatc
attgacaattcagttatttctgatcctacggatgatgaagaaagtttagcaactggagtg
atgactattgttgttacatctgaaggaaacgtttgttctgttcataaaccaggcggcact
ccgttaccatctgatgttcttgtaaaaaaatgtacgaacgaagcgaaaaaaagggcaaaa
agtgttcagaagcttgttaacacagctttgcaggaaatatcatga
DBGET
integrated database retrieval system
