Dendronephthya gigantea (soft corals): 114521436
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Entry
114521436 CDS
T06112
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03420
Nucleotide excision repair
dgt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114521436
09124 Replication and repair
03420 Nucleotide excision repair
114521436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dgt04121
]
114521436
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114521436
Ubiquitin system [BR:
dgt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
114521436
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
114521436
TCR (transcription coupled repair) factors
Cul4-CSA complex
114521436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
114521436
NCBI-ProteinID:
XP_028397691
LinkDB
All DBs
Position
Unknown
AA seq
1138 aa
AA seq
DB search
MAFNYVVTAQKPTAVSAAVVGHFTGEKDLNLIIAKNTRLEIHLVTAEGLRPLLDVGIYGK
IACMHLFRPKGESQDLLFILTCRYRVFILSYNAGPGDIITRAYGDVQDKIGRPSDTGVMA
IIDPECRIIGLRLYDGLFKVILLELDSSKELKAFNIRFEELEVSDIKFLHGCANPTIAFI
YQDPHGRHVKTNEISLKDKEFSNIPWQQENIEVEAFMLIAVPKPLGGVIIIGQESITYHN
GRQYHAIAPAALRQSTATCYGQIDPNGSRYLLGDLEGMLFMLLLEQHEVDGNVEIKDLKL
EALGEVSIPHCLAYLDNGVVFVGSALGDSQLVKLSTKADKHGSYVQVMESFTNLGPIVDM
VVVDLERQGQGQLVTCSGASKEGSLKIIRNGIGIHENATVDLPGIMGIWALKISEPDSEY
DDTLVLSFVGETRILTLTGEEVEETEIDGFVDDEQTYYSGNVCGKKIVQVTSSSIRLVNC
DTLKLVSEWRPPKSKTISVVSCNKKQIVAAVGKDLFYLEFQDENIVQICTTILEHEVACL
DISLPEAAEEKSTLVVVGLWTDISLRVLQLPSMDQLCIENLGGEIIPRSVLMAMFEGVKY
LLCALGDGTFFYFIMNSTGFLSEKRKITLGTQPAALKTFRSLSTVNVFACSDRPTVIYSS
NHKLVFSNVNLKEVGCMCPLNTQGYPQSLALSNANSLTIGTIDEIQKLHIRTVPLAESPR
RIAYQETTQSFGVATTRTELQDLYSSESRPVRKSASLTAQNITKNIGAITSNSTALPDGI
TFGNDVECGSFLIVDQHTFEVTHAHHLKEMECPVSLISCKLTKGSHQYYCVGTAFVRPED
AEPKSGRLILFHLEDGKLTQVAEKEVKGSVYSLVEFNGKIVAGINSTVSVFEWTSDGELK
VECSYHDTVLALYIKCKGDFILVGDLMRSVKLLLYKPVEGSLEEIALDYNPNWMMAIEIL
DDETFLGSENSFNLFTVQKDSSTAEDDRTTLQDIGKYHLGESVNVFRHGSLVMEHLGETS
NPFQGTVLYGSVTGAIGIIGQISQDLYEFLTQLQAQMNKVIKSVGKIDHSFWRSFSTERK
IEESRGFIDGDLIESFLDLPRAQMDEVASNLQIQEENMKRQATVEDLVKLVEDLTRIH
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttaattacgttgttacagctcagaaacccactgcggtatctgctgcagtcgtc
ggacattttacaggcgagaaagacctcaatctaattattgcaaaaaatacacgtcttgaa
atccatcttgtaaccgcagaaggtttaagacctctgcttgacgttggaatatatggcaag
atagcatgtatgcatttatttcgtccaaagggtgaatcacaagatctgctgtttatttta
acatgcagatacagagtgtttattttgagttataatgctggaccaggggatattataact
agggcatatggtgatgttcaggacaaaattggcaggccatctgacacaggagtgatggca
atcatagatccggaatgtcggattataggcttacgtctttatgatggtctcttcaaagtt
attttactggaacttgactcatcaaaagaattgaaggcttttaatataagatttgaagaa
ctagaagtgtctgatataaaattcctccatggatgtgctaatcctaccatagcatttata
tatcaggaccctcatggccgtcatgttaaaactaacgaaatatcattaaaagacaaagaa
ttttctaacattccttggcagcaggaaaatattgaagttgaggcatttatgcttatagca
gttcccaaacctcttggcggtgtgatcattattgggcaagagtcaataacatatcacaat
ggtcgtcaatatcatgctatagctcctgcagccttgagacaaagtacagccacgtgttat
ggtcaaattgatccaaatggctcacgatatttgctgggagatcttgaaggaatgttgttt
atgttgctgttagaacaacatgaagttgatggaaatgtggaaattaaagatttgaagttg
gaagctttgggggaggtttccatacctcattgtttggcatacttggataatggtgttgtt
tttgtgggatccgctttaggagactcacagttagtcaagttgagtacaaaagctgacaaa
catggtagctatgtgcaagtgatggaatcattcacaaatcttgggccaattgtagacatg
gttgttgttgatttggagagacagggtcaaggacagctggtgacatgttctggagctagt
aaagagggttcgttgaaaattattagaaatggaattggtattcatgaaaatgcaacggtc
gaccttcctggaattatgggtatatgggcgttaaaaatatctgaaccggattcggagtac
gatgatacgttagtgttgtcctttgtgggtgaaacacgaattttaactcttactggcgag
gaagtagaggaaacagagatcgatggatttgtcgacgatgaacaaacatattacagtgga
aatgtttgtggcaagaaaattgtccaggtaacatcaagctctattcgtttggtgaactgt
gacaccttgaaacttgtctctgagtggcgacctcccaaaagcaagacaatcagcgttgtc
tcctgtaacaagaagcagattgtggcagcagttggaaaagatttgttttaccttgagttt
caagatgaaaatattgttcaaatttgcactaccattttagaacacgaagtcgcttgctta
gacatatctttaccagaggctgctgaagaaaaatctacgttggtcgtggttggtttgtgg
actgatatatcattacgagtactccagttaccaagcatggatcagctctgcattgaaaac
ttgggtggagagatcatccctcgatctgtattaatggcgatgtttgaaggtgttaaatat
cttctttgtgcacttggtgatggaactttcttctacttcatcatgaacagcacaggtttt
ttatcagagaaaaggaaaatcactcttggtactcaacctgcagctctcaagactttccgt
tctctttcaactgttaatgtttttgcttgctctgatcgaccaactgtaatatattctagc
aaccataaacttgtcttttccaatgtaaatctgaaggaagtgggatgtatgtgtcctcta
aatactcaaggatatcctcaaagtttggcgctatcaaatgcaaattctttgacaattgga
acaattgacgagattcaaaaactgcacatcagaactgttcctcttgctgagtcaccgcgt
cgtatagcttaccaggagacaactcagagttttggtgttgcaacgacaagaacagaactc
caagatttatacagcagcgaatcacgtcctgtgagaaagagtgccagtctcactgcacag
aatattaccaagaatattggagctataacaagcaatagcactgccttacctgatggaata
acatttggcaatgatgtggaatgtggaagttttcttattgtcgatcaacatacatttgaa
gtcacccatgctcatcatctcaaggaaatggaatgtcctgtcagtcttatctcgtgtaaa
cttacaaagggttcacatcagtattattgtgttggaactgcattcgtccgtcccgaggat
gctgagccgaagagtggtcgattaattttatttcatcttgaagatggaaaactaacacaa
gtggctgaaaaagaagtgaaggggtctgtttattccttggtagaatttaatggcaaaatt
gtggctggtatcaacagcacagtgagtgtctttgaatggactagcgatggtgaactgaag
gtggaatgtagttatcatgatactgttcttgcactttacatcaaatgtaaaggtgatttt
atattggttggtgatttaatgcggtctgtgaaactattgctttataagcctgttgaagga
tctctagaagagattgcattagattacaatcctaactggatgatggctatagagatacta
gatgatgaaacatttcttgggagtgaaaattcctttaatttatttaccgttcaaaaagac
agttcaacagcggaagatgatcgtacaacattacaagatattggtaaatatcatctggga
gaaagtgttaatgtctttagacacgggtcgttggtgatggaacatcttggagaaacatcc
aatccatttcaaggaactgttttgtatggttctgttacaggagcaattggcatcatcgga
caaatatctcaagatttatatgaatttcttactcaattacaagcacagatgaacaaagtg
ataaaaagtgttggaaaaatagatcatagtttttggagatcattctctaccgagcgtaaa
atagaagaatccagaggttttattgatggggatttaatagaaagctttttggatcttccg
cgagcacaaatggatgaagtagcttcaaatcttcagattcaagaagaaaatatgaaaagg
caagcgactgtagaggacttggtgaaactggttgaagatttgacccgaattcactaa
DBGET
integrated database retrieval system
