Dendronephthya gigantea (soft corals): 114521731
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Entry
114521731 CDS
T06112
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114521731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
114521731
NCBI-ProteinID:
XP_028398055
LinkDB
All DBs
Position
Unknown
AA seq
1784 aa
AA seq
DB search
MPYTLWVVFALLCLPGSILSQNVPTDIDSCIGNACYPSTGDLLVGRGDRLYASSTCGSRG
RVERFCVISELKERDNCFWCDSRPTSGDTYSHAPRFMEILFNEEAKKSWWQSENGKENVY
LQLDFGAQFHVTHIVMKWKSFRPAAMLIEKSFDYQRSWNVSRYYAKNCAASFPGVPVVPQ
PDITSPYCSSDYSDIEPSSGGEVVYKALKGDEDASDVKIQNLLRMTNIRINFTKLNTLGD
DIIDNSLETNRNYYYAVNWISIRGSCSCYGHAKQCLPGPNEYNNKPGMVHRICNCTHNTK
GVNCEECKDLYNDLAWEPAVQGKPFECKKCECHGHADKCTFNPAVFEASGGVSGGVCTDC
KHNTIGVKCEKCKPLHYKDPNLPISDPNICKPCDCDPVGAVGRGECEMEEDPSRNRRAGQ
CICKENVGGERCDRCKSGYFNLQQDNQLGCEPCGCNSDGSVHESCDALTGKCRCHRFVEG
EKCDKCFDGYWNLKSGDGCDPCDCDPGGAYDNFCDVVTGQCRCRPGIEGQKCDRVIPGFY
YALSDNLKYEGEDARGIGETSVNLLERPQGTDVVWTDVGSLNISEGNGVEFVVTNVPHTG
NYKILMRFHPQTFSSWEEVKLTVSRADGQRTINGACGNTLSSNGYSVITTVQLYEQYKLL
DEMVCLEKDVHYYVRLDFNKRQGRDNHANLDSLVLIPDMNSVSIFQGDRGRSRLNDFTRF
RCDRISLRAKVPRPEVHSVCKKLHFSGSAVIYDGAIPCDCNQIGTIRNASGIYTCNDAAG
QCPCKPNVIGRRCLKCAPGTYNFGPNGCSPCNCDLRGSDDNLCDVVTGQCKCNGLGTGRQ
CNECPVGQWGFPRCRPCECNGHASRCDSVTGVCIDCLHNTAGDNCELCKAGYFGDATKGT
STDCQQCQCPGGSSENQFSPTCRVDTSTTPPTFICDQCPPGYEGKQCEECSDGYYGNPLI
PGGKCQKCNCSGNVDFTEAGGCDKKTGICLRCLHNTAGYFCDVCKPGFFGNAKNQTCQPC
ICNEIGTNSGPGAGPCNASTGQCPCKPNVVGLSCDRCAPGHWNLASGDGCESCDCCAFGS
TKSQCDQSSGVCECRRDFGGEKCCDCEEGFWGVPPGQCRPCDCNPSGSVHTQCNKETGEC
VCKDGVTGKKCNKCKPETTQEFPECEACHECYYSWDKIITELEKIASRLKGATGGNAGGP
VPVDYKKDLDELEELVRRIEYILDDRTTYPEHLEEIKNKINTYRAKIMVIMNNIDQVHEH
LGNTSTDMKHANNEILKLRKIYERLRVLVKGQLRNLTLIEGKKPGEALNDTQRSLEVSIR
AFDLSNEVRKIIEESAKQREEMDNKVPGYNKTHEEIRDKLKKYEEEFVRLNDIIARINEK
LCGANQTICGGCTPFGCDNCGGDGCDGAIPLATQAVDKATLAERKLWEKERDANATLAEV
VQARITVDNAMKEAKIALELAKAIQIQASNDTDHITVLIAEIYKYLNRSSDNAHEVRRIA
EFVLGRSLTISEEGIKELGRRIKDAVNKLTGIDQILIETARELSTLENLKQEAIQANSSA
TNVAGIAKEVTDSLANVVVVQDGLRTSLKKAKRKIKDVEIRLLEVETIINKTLNKSIESV
RLTTEMKRRIGPLEKKFEENEKLLKVAETEVKDAVNISSESKTDSAELKKRFDDMSKRYQ
DKLDEQKKFRNRTEKALDAAKKVKSSLIMKLRDLESYLIRRKELEDLIEKLKKLEDQVDE
KYCEITLDTANFKICIDEGTSTKVPLPAEGYCERLKEYTKTQGK
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgccatataccttgtgggttgtctttgctttgctgtgcctcccaggttcaatattaagt
caaaatgttccaacggatatcgacagttgtataggaaatgcctgctacccttccacaggt
gatcttctagtaggtcggggagatcgtctttatgctagttcgacttgtggttctcgaggc
agggtcgagaggttttgtgtcatttctgaattaaaagaaagagataattgtttctggtgt
gattctcgaccaacatctggagatacatactcacatgcgcccaggttcatggaaatttta
ttcaatgaagaagcgaaaaagtcctggtggcagtctgagaacggaaaagaaaatgtctac
cttcagctcgactttggcgctcaatttcatgtcacacatattgttatgaaatggaagtca
tttcgtccagctgcgatgttgatagagaaatcttttgactaccaaagatcttggaatgta
tcacgttattatgcaaagaattgtgcagctagttttcctggtgtacctgtggttccacag
cctgacattacgtcaccatattgttcttcagattattctgatattgaaccatccagtgga
ggagaggtcgtgtacaaagcgttgaaaggtgacgaagatgcgtctgatgtgaaaattcaa
aacttacttcgaatgactaacattcgtatcaacttcacaaaattgaacaccttgggggat
gatatcattgataacagtttggaaacaaacagaaactattattacgcggtgaattggata
agtattcgtggcagttgttcgtgttatggtcacgcaaagcaatgtctacctggtcccaat
gaatacaataacaaacccggcatggttcacagaatctgcaactgcacgcacaacacgaaa
ggcgtgaattgtgaagaatgtaaagatctatacaatgatcttgcttgggaacctgcggtg
caaggcaaaccttttgaatgtaaaaaatgtgaatgtcacggacacgcagacaagtgtaca
tttaatccagcagtttttgaagcgtcaggtggagtcagtggtggtgtttgcacagattgt
aaacataacacaatcggtgttaaatgtgagaaatgtaaacctttacattataaagatcca
aacctcccaattagtgatccaaatatctgcaaaccgtgtgattgtgatccagtgggtgca
gtaggtcgtggagaatgtgaaatggaggaagatccaagtcgtaatcgccgcgctggtcag
tgtatctgtaaagaaaatgttggtggtgagagatgtgatcgctgtaagagtggatatttc
aatctacaacaagataatcaactcggctgtgaaccttgtgggtgtaactcggatggatca
gttcatgaaagctgtgacgcgcttaccggaaaatgtcggtgccatagatttgtggaggga
gagaaatgtgacaaatgttttgatggttattggaatcttaaatctggtgacggatgtgat
ccttgtgactgtgatccaggcggagcttatgacaatttttgtgatgttgtgactggacag
tgtcggtgcaggcctgggattgagggacaaaaatgtgatcgtgtcattcctggtttctac
tatgcactttctgataatctgaagtatgaaggtgaagacgcgcgaggcattggagaaaca
tcagtgaacctccttgagcgacctcaaggtaccgatgtagtgtggacagatgttggaagt
ctcaatatctccgagggaaatggagtggagttcgttgttacaaatgttcctcacaccggg
aattataaaatactgatgcgattccatcctcagacgttttcttcctgggaagaagttaaa
ttgacagtttctcgggcggatggtcagagaacgatcaatggtgcttgtggaaatacttta
tcatcaaatggttattcagtaattaccacggtccaactttatgaacaatataagttgctg
gacgaaatggtttgtttggagaaggatgtgcattattacgttcgtcttgatttcaacaaa
cgtcaaggtcgcgataaccacgctaatttagactcccttgtcctaattcctgatatgaat
tcagtgagtatattccaaggtgatagaggtcgctcaagactaaatgacttcacaaggttt
agatgcgatagaataagtcttcgtgcaaaagttccaagaccagaagtacacagcgtttgc
aagaaattgcatttctctgggtcggctgtaatttatgatggggcgataccttgtgactgt
aatcagattggtacgatacgaaatgccagcggtatttacacgtgtaacgatgccgctggt
cagtgtccttgtaaaccgaatgtgattggtcgaagatgcctaaaatgtgctcccggaaca
tataactttggtccaaatggttgttcaccatgcaactgtgatctacgaggatcagatgat
aacctgtgtgatgtcgtaacaggacaatgtaaatgtaatggtcttggcactggcagacag
tgtaacgagtgtcctgtgggacagtggggatttcccagatgtcgtccatgtgaatgtaat
ggtcatgcttcacgatgtgattctgtgacaggagtttgtattgattgtctccacaatact
gctggtgataattgtgaactgtgcaaagctggttactttggtgacgccaccaaaggaaca
tcaacggactgtcagcaatgtcaatgtccggggggaagcagtgagaaccagttcagccca
acgtgtagagtagataccagtaccacgccaccaacatttatttgtgatcaatgtccacct
ggttacgaggggaagcagtgcgaagaatgtagcgatggttactatgggaacccattaatt
ccaggaggaaaatgccagaaatgtaattgtagtggcaatgtcgactttactgaagccggg
gggtgcgacaagaaaactgggatatgtctacgctgtctacataataccgctgggtatttt
tgtgatgtgtgcaaacctggtttctttggtaatgccaagaatcaaacttgtcaaccgtgc
atttgtaacgaaataggaacaaactcgggtccaggtgcaggcccttgtaatgcttcaaca
ggccaatgtccctgcaagcctaatgtcgtgggcttgtcgtgtgatagatgcgcgccaggg
cactggaatctagcgagtggcgacggatgtgagtcatgtgactgttgtgcttttggttcg
acgaagagccagtgtgaccagtcatcaggtgtgtgcgaatgtcgtcgggatttcggtggt
gaaaaatgttgtgattgtgaagaaggcttctggggcgtacctcctggacagtgtagacca
tgcgattgcaaccctagtggctcagtgcacactcagtgcaacaaagagacaggagaatgt
gtttgtaaagacggtgttactggaaagaagtgtaacaaatgtaaaccagaaactacccaa
gaattcccagaatgcgaggcttgtcatgaatgttactacagctgggataaaataatcacc
gagctggagaaaatagcctccaggctgaaaggagccactggaggtaacgcaggagggccc
gttcctgtggattataagaaagatttagatgagttagaagagctggttcgtcgtattgaa
tacattcttgatgacagaacaacataccccgaacatttagaggagataaagaacaagata
aacacatatcgtgccaaaatcatggtaattatgaataacattgaccaggtacacgaacat
ctgggcaacacaagcacggatatgaaacatgcgaacaatgaaattttaaaactgcgtaag
atttacgaacggcttcgtgtattagttaaaggacagcttcgaaatctcacgttgatcgag
gggaaaaaaccaggtgaagctctgaatgacacacaacggagcttggaagtttccattcgt
gcatttgatctttcaaatgaggtgagaaaaataatcgaagaatctgctaaacaacgagaa
gaaatggacaataaagttcctggttataacaagacacatgaagaaattcgtgacaaattg
aaaaaatatgaagaagaatttgttaggctcaatgacattattgccaggattaatgaaaaa
ttatgtggggctaatcaaacaatttgtggtggatgcactccgtttgggtgtgataattgt
ggtggagatgggtgtgatggagccataccactagccacgcaggctgtagataaagcaaca
ttggctgaacgtaaactttgggagaaagaacgtgatgctaatgctactctggctgaggtc
gttcaagcacggattactgttgacaatgcaatgaaggaagccaagattgccctcgaactg
gcaaaagcaattcaaattcaagcttcgaatgacacagatcacatcacagtattgatagcg
gaaatttacaaatacttaaatcgaagtagtgacaatgctcacgaagttcgaagaattgcc
gaattcgttctgggcagaagtttgacgatctctgaagaaggaattaaagaactcgggaga
cgcatcaaagacgctgtaaacaagttgacgggaatcgatcaaatactcatcgaaaccgca
cgcgaattatcgacgcttgaaaatctaaaacaagaagcaattcaagctaattcatcagcg
acgaatgtggctggcattgctaaagaagttacagactctcttgctaatgttgttgtcgtt
caggatggcttaagaacatctttaaaaaaagcaaagagaaaaatcaaagatgttgaaatt
agactcctcgaggttgaaacaatcataaacaaaactttgaacaaatcaatagaatctgtg
cgtcttacgacggagatgaagaggcgaataggaccgttggaaaagaaatttgaagagaat
gagaagcttttgaaagttgccgaaacggaagttaaagatgccgttaatatttcctctgaa
tcaaaaactgattccgcagagcttaaaaaacgctttgacgacatgagcaaacgttaccaa
gataaattagatgaacagaaaaaattcaggaatagaactgagaaagctcttgacgccgcg
aaaaaagtaaaatcatcgcttatcatgaagcttcgtgatttagaaagttatttaatacga
cgaaaggagcttgaggatcttattgaaaaactgaaaaaacttgaggaccaagtagatgag
aaatattgcgagataactttggatacagctaatttcaaaatttgtattgatgaagggacg
agcacaaaggtacccctgcctgctgaaggatattgcgaaaggctcaaagagtataccaag
acacagggcaaataa
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