Dendronephthya gigantea (soft corals): 114522438
Help
Entry
114522438 CDS
T06112
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dgt03016
]
114522438
Enzymes [BR:
dgt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
114522438
Transfer RNA biogenesis [BR:
dgt03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
114522438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
NadN_nucleosid_C
Motif
Other DBs
NCBI-GeneID:
114522438
NCBI-ProteinID:
XP_028398915
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MAENFEKTEETRHQGCAFFLKRKNRYCKMIPGKRNKYCGEHSYLAQDNQGIPARKRIPCP
LDTKHTVFEDQLEKHLKKCNVTKKRNVEYYVANINSGICHNESSWEKLPLRKIPKDDIQN
CIDRIKLYFEQGNAVDIKTSVLTEQCLENEINNTSCNHALKKHLHQQSSLIGNLRNSELL
KSDSIFVEFGAGRGLLSHWIQKSMKDESNVDFLLVDRASTRYKADSYHRGPEQGPSFHRI
QIDIEHLDLDNVPLISNSKQEVTAVSKHLCGAATDLGLRCLLNSPDETECSDDNPDRNEA
RSTKRLKLGGNRVRGLLFALCCHHCCSWASYVGRTFLENLGFTAYDFHILCCLSSWATCG
SRKETRANAKNDTQASENRTTCETVTGAPTELTEDTTGTRGDDHEHRTIEVDEGSCIRAL
GFTKSQSEDIGRQSKRLIDAGRVWYLKQFDLDASLFYYVDRSVSLENIAIVAYNRRSNFE
KESD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaattttgaaaagacggaggaaactagacatcaaggatgtgcgttctttttg
aaacgtaaaaacagatattgtaaaatgattcctgggaaaagaaacaaatattgtggtgaa
cattcatatcttgcccaagataaccaaggcattccagcgcgaaaacgaattccttgtcca
ctggatacaaagcacacagtgtttgaggatcaacttgagaaacatttgaagaaatgcaat
gttactaagaagagaaacgttgaatattatgttgcaaatattaacagtggaatttgccat
aatgaatcatcatgggaaaagctacctttaaggaaaattccaaaagatgatatccaaaat
tgtatagacagaatcaagttatactttgaacaaggaaatgctgttgatatcaaaacctct
gttttaactgaacaatgtcttgaaaatgaaataaacaacaccagttgtaaccatgctttg
aaaaagcatttacaccaacagtcatcattgataggaaatttaagaaattcagaactttta
aaatcggattcaatttttgttgaatttggagcaggacggggtttgttatcacattggata
caaaaatctatgaaagatgaatcaaatgtggatttcttgcttgtcgacagggcaagcacg
cgatataaggcagactcctaccaccgtggaccagagcaaggaccaagttttcaccgaatt
cagattgatattgaacacttagatttagataatgtgccgcttatatccaacagtaaacaa
gaagtaactgccgtcagcaaacacctgtgtggagctgcaacagatctgggattgagatgt
ctactcaattcacctgacgaaacagagtgttctgacgacaacccagacagaaatgaagcc
agatcaacaaagagactaaaacttggcggcaatcgtgtgcggggtcttttgtttgcattg
tgctgtcaccactgttgttcttgggctagctatgtcgggagaacatttttggaaaatctc
ggttttactgcgtacgactttcacattctgtgctgcctgagcagttgggctacctgtggc
agtcgaaaggaaacacgggcgaacgctaagaatgatacccaggcctctgaaaaccgtacg
acgtgcgaaacagtgactggggccccaactgagctgactgaggatacaacagggacaaga
ggggatgaccatgaacatagaacgatagaagtcgatgaaggaagttgtataagagcttta
ggatttactaagagtcaaagcgaggatattggtcgtcaaagtaaacgtttaattgacgct
ggacgagtctggtatttgaaacaatttgatttggacgcttctcttttttattatgtcgat
cggtcggtttcgttggaaaacatcgccatcgtcgcttataacagaagaagtaattttgaa
aaagagtctgattaa
DBGET
integrated database retrieval system
