Dendronephthya gigantea (soft corals): 114522862
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Entry
114522862 CDS
T06112
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03018
RNA degradation
dgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114522862
09123 Folding, sorting and degradation
03018 RNA degradation
114522862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114522862
03041 Spliceosome [BR:
dgt03041
]
114522862
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114522862
mRNA degradation factors
5'-3' decay
Lsm complex
114522862
Spliceosome [BR:
dgt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
114522862
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
114522862
NCBI-ProteinID:
XP_028399432
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MATGGDKKKKESIFDLSKFLDKPIRVKFQGGREATGVLKGFDPLLNLVLDGTTEYLRDPD
DPFKLSDDTRPLGLVVCRGTSVVLVCPVDGMEAIANPFLQQE
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggaggtgataagaagaagaaagagagtatttttgatttatcaaagtttttg
gataaaccaattcgcgtaaagttccaaggggggcgagaagccactggtgtgctgaagggg
ttcgacccattgcttaaccttgtgttggatggaacaacagaatatttgcgagatcctgat
gatccattcaagctatccgatgatactcgaccgctaggacttgttgtctgcagaggaact
tcggtggtgcttgtttgtccagtggatggaatggaagcaattgcaaatccatttttgcaa
caagagtag
DBGET
integrated database retrieval system
