Dendronephthya gigantea (soft corals): 114523165
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Entry
114523165 CDS
T06112
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dgt03009
]
114523165
03012 Translation factors [BR:
dgt03012
]
114523165
Enzymes [BR:
dgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
114523165
5.6.2.5 RNA 5'-3' helicase
114523165
Ribosome biogenesis [BR:
dgt03009
]
Eukaryotic type
Other ribosome biogenesis factors
114523165
Translation factors [BR:
dgt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114523165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
AAA_19
Viral_helicase1
UvrD-helicase
ResIII
DEAD
AAA_16
Helicase_RecD
AAA_22
nSTAND3
AAA_18
AAA
PhoH
NTPase_1
UvrD_C_2
Flavi_DEAD
Ribosomal_S20p
CCDC-167
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
114523165
NCBI-ProteinID:
XP_028399828
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MADLNQFVEKMIELLNLERQAEINESKAFYQNSDNATLENKGVCLRKMVLFSQKTGLYGR
TLVTLGKGNVEHSVKKFPLPAHCITTGDIVGLSYSSEDNNVAELSSGIVTRVSETSIVIA
FEEAFDSQAIEEDRLMRITRLANDVTFKRMKRALETLQNTPSSYCSSHLISVLFGAMPLS
EPLNLSSLQQRPDDLMQKQKDFFNGNLNESQQDAVRFALSSRHVGVVHGPPGTGKTTTIV
EVIVQAVKNFGWKILACAPSNIAVDNILERLIKYKIKAVRLGHPARLMEKIHSHSLAAIL
DSSHDTAIVKDVRRDIDTAMRNLQGSRNSGERSRLRTELKTLRKELREREEKALKHILHN
AQVILSTNVSASDDGPLKHLPRDHFDLVVIDEAAQSLEAACWIPLLWAPRCILAGDHKQL
PPTIMSRDAARRGLEQTLMERIIEMFGDKVVHMLTTQYRMNKAIMKWSSDRLYDGKLLAD
VSVAQHLLCHIPEVNDTELTSLPLLMIDTAGCDLYELRSQDEESKGNEGEADVVAAHVSG
LVDSGVKQQDIGVITPYNLQVELLRSRLSTKYPALEIKSVDGFQGREKEAVVISMVRSNT
KGEIGFLAENRRMNVAVTRARRHLTIVGDSTT
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttaaatcagtttgttgaaaaaatgatagaattgttaaatttggaaaggcaa
gctgaaataaacgaatctaaagcattttaccaaaattccgataacgcaaccttggaaaat
aaaggtgtttgcttgagaaaaatggttctatttagtcagaaaactggtttatatggccga
actttggtgactctgggcaaaggaaatgtggagcattctgtgaagaaatttcctttacca
gcccattgcattacaactggtgacattgttggtttgtcctattcctctgaagacaataat
gttgcagaattatcatcagggattgttactcgagtgtccgagacatcaattgtcattgca
tttgaggaagcttttgattcgcaggcaattgaggaggatagattaatgagaatcactcgt
ttagctaatgatgtcacctttaaacggatgaaacgagccctggagacgcttcaaaacaca
ccttcctcgtattgttcatcccatttgatctccgtactttttggtgcaatgccactgtca
gaacccctaaacctgtcaagcttacagcaaagaccagatgacttgatgcaaaaacagaaa
gatttttttaatgggaatctcaatgaaagccagcaggatgcggtgaggtttgccctgtca
agtcggcatgtgggggttgtgcatggtcctcctggcacaggaaaaacaaccacaattgtt
gaggtcattgttcaagctgtgaagaattttggttggaagatactggcttgtgctccatcg
aacattgctgttgataatattttggaaagactgattaaatataaaattaaagctgtgcgt
ttgggtcatccagctcgcttgatggagaagattcacagtcactctttggctgccattttg
gattcgtctcacgacacagcaatcgtgaaggatgttagacgagatatcgatactgcaatg
cgtaatcttcaaggcagtagaaactctggcgagcgatctcgtctgcggacagagctgaag
acactgcgtaaagagctgagagaacgcgaggagaaagccttaaaacacatcctccacaat
gctcaagttatactatcgacgaatgtctcggcctctgacgacggaccattgaaacatctt
ccaagagatcatttcgatttggttgtgattgacgaggctgctcagtctttggaggcagcg
tgttggataccgttgctatgggcaccgagatgcattctcgctggagatcataagcagctg
ccgccaactataatgtcacgtgacgctgcccggcgaggactggaacagactttgatggaa
agaatcatagagatgtttggtgataaagttgttcatatgttgacaacacagtacagaatg
aacaaagccataatgaagtggtcatcggacaggctttatgacgggaaactgctggccgat
gtgtccgtggcgcaacatttattatgtcacataccggaggtgaacgataccgaactaacg
tcattgcctttgttgatgattgataccgctggatgtgatctgtacgaactgcggtcgcaa
gacgaggaatctaaaggtaacgaaggcgaggctgatgtcgtggccgcgcatgtcagcggt
ctggtggacagcggtgtgaagcaacaagacataggagtcataacgccctacaacctccag
gtagaacttctaaggtctcgtttatccaccaagtacccagcacttgagatcaaatccgtg
gatggttttcagggacgcgagaaagaagctgttgtaatttcaatggttcggtcaaatacg
aaaggtgaaattgggttcttggccgagaaccgacgaatgaacgtagcggttacgagagca
cgtcgacatttaacgattgtcggcgattcaactacataa
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