Dendronephthya gigantea (soft corals): 114523255
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Entry
114523255 CDS
T06112
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04140
Autophagy - animal
dgt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114523255
04148 Efferocytosis
114523255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dgt04131
]
114523255
Membrane trafficking [BR:
dgt04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114523255
Hops complex
114523255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_5
zf-RING_16
zf_RING_Vps8_fungal
zf-rbx1
zf-RING_11
UBL_UBAC1
zf-RING_Vps41
PspA_IM30
PurS
zf-C3HC4_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
114523255
NCBI-ProteinID:
XP_028399921
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MASILEQYENELQTGGNLPSSRQILSDEPIATGYVDFRTEDVPMFRREKVNFRPPSSIMD
LSVSNSTVIIALNNTVMRLNLMNPEELDKIEISKRHDDTVYKVFQDPTARHAIICLRSYE
SLYLARNSKKTKPIPKLKGHLVEAVAWNKTRLTETTTQAILIGTNKGLVLETELDNEEKF
FQAGLEKYFRQLHNVNSGDKNEPITGLMFDKFPRSDRLYVVMVTTKSRLFQFIGEISMTE
PPLFLSLFSQFEINPASFLELASDQLEWSQLVFYYTKARGNPSSFAWLTEPGVYCGSLNF
DTPQETSGSITSEARLLPYVTADGQSSTPPIALALTEFHVLLLYKNRFEAVCLLNDQVVF
QDLLPERHGHMLGMVTDPVKKTIWVFSTAAIFQYNVNKETRHVWKLYLDKGKFDEAEEYA
RDNPVHTDEVLRKKAESFFDKKEYRAAAATFALTQASFEEVALKFIQVSEQESLKVFLVK
KLNNMDHKDKSQITMIAMWLIELYLNDLGELKDNSDGNEQELERMQDDFRKLLATSKVKT
SLEESRKTAYDLIASHGDVENLIFLAMLMKDFERVIHHHIQHDDYRAALDVLKKQNEPEL
YYKFSQVLMQHIPEDTVNAWIEQKKRLDPKKLIPALVYYDNKQDKALIEQAVRYLDFCVE
ILGVQDKAIHNYLLSLYVKQQDDVSLIKYLQLQGQDREEVHYDLEYALRLCSEHDLKNAC
VHIYSTMGLYEEAVDLALLFDVELAKIQASKPEDDEALQKKLWLRIARHVVEKEEDVKKA
MQFLNDFQQIKIEDILPFFPDFVTIDHFKDAICSSLEEYNQHINELKNEMREATESAENI
RQDIHEMKNRYRVVEAEKKCVSCSFPLLTRAFYIFPCHHAFHADCLVDEVLPHLRGKQRA
KLELIRKRLYQTGGDPSPRPGSRNRENDPRIAPEDSIEKLRADQDELVASECVMCGEFMI
RSIDQPFINPDEDALESWK
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcttctattttagaacagtacgaaaatgagctgcaaactggtggaaatttgccttca
agcagacaaattttgtcagatgaaccgattgcaactggttatgttgactttcgtacagag
gatgtccccatgttccggagagaaaaagttaacttcagaccaccatccagtatcatggat
ttatcagtcagcaatagtacagtgataattgctctgaacaacacagtgatgagattgaat
ctcatgaacccagaagaactcgataaaattgaaatatcaaagagacatgatgatactgtt
tataaagtatttcaagatccaactgcaagacatgcaatcatctgtttgaggtcatatgaa
tctctttatctggccagaaacagcaaaaaaacaaaacctattccaaaactaaagggtcat
cttgtagaggctgtggcttggaacaagaccagattaactgagacgaccacacaggcaatt
ttgattgggaccaacaaggggcttgtattggaaacagaacttgacaatgaagagaagttc
tttcaggcaggacttgaaaaatatttccgacagctgcataacgtaaacagtggtgataaa
aatgaacctatcacgggattaatgtttgataagtttccaagatctgaccgtctttatgtt
gttatggttactacaaaaagccgtttatttcagtttattggtgaaatttcaatgacagaa
cctccattatttctgtctttgttcagtcaatttgaaattaatccagccagtttccttgag
ttggcatcagatcaacttgaatggagtcagttggtattttattacaccaaggccagaggc
aatccaagttcctttgcttggctaacagaaccaggcgtttactgcggcagtctaaatttc
gacaccccgcaagaaaccagcggtagtatcacatcagaagctcgtcttctcccatacgtc
accgcagacggccagagctccacaccaccaattgctttggccctaaccgagtttcatgtt
ttactcctgtataagaacaggtttgaagctgtgtgcttactgaacgatcaagttgtcttt
caagatttactgccagaaaggcacggtcatatgctgggaatggtgactgatccagtgaaa
aaaaccatttgggttttctcaaccgcggcaatatttcaatataatgtcaacaaagaaact
cggcatgtgtggaaattatacttggacaaaggaaagtttgatgaagcggaagaatatgct
cgtgataatcccgtgcacacagatgaagtcttgagaaagaaagctgaaagctttttcgac
aaaaaagaatatagggcggctgccgctacatttgccttaactcaggcatcgtttgaagag
gtcgcgttgaagtttattcaagtttcagaacaagaatctttgaaagtttttttggtgaaa
aaattgaacaacatggaccacaaggataaaagtcaaattacgatgatagcgatgtggctc
attgaactatatttaaacgaccttggtgaattgaaagataatagtgacggaaacgaacaa
gagctggagagaatgcaggatgatttcaggaaattattagcaacgagtaaagttaagacg
tcgctcgaggagagcagaaagactgcgtacgacctgatagccagtcatggcgatgtggaa
aatttgatctttttggcaatgttaatgaaagattttgagcgagtcattcatcaccatatt
cagcacgatgattaccgggcagccttggatgttttgaaaaaacagaatgagcctgaactg
tattacaagttttctcaagtcctgatgcagcatatcccagaggatacggtcaacgcttgg
attgaacaaaagaaaagactggatcctaaaaagcttattccagctttggtttactatgat
aataaacaggataaagctttaatcgagcaagctgtacggtatttggacttctgtgtggaa
attcttggagtgcaggacaaagccatacataactacttgctttcattatacgtgaagcaa
caagacgatgtttcactcatcaaatatttgcaactccagggacaggatagagaggaggtc
cactatgacctggagtatgcgctaaggttgtgctctgaacatgatctaaagaatgcttgc
gttcatatctacagcacaatgggtctgtacgaggaagcggttgacctggcattacttttt
gatgttgagttggcgaagattcaagcgagcaaacccgaggacgacgaagcactgcaaaag
aaactttggttgagaattgcgagacatgttgttgagaaggaggaggatgtgaagaaagca
atgcaatttctcaacgattttcaacaaatcaaaatcgaagacattctaccattcttccct
gattttgtcactatcgatcacttcaaggacgcaatctgttcgtctctcgaagagtacaac
cagcacatcaatgaactgaaaaatgaaatgcgggaagcgacagaaagtgctgaaaatatc
cgacaagatatacatgagatgaaaaacagataccgcgtagtggaagctgagaagaaatgt
gtttcgtgttcatttcctttgctaacaagagctttctatatttttccatgtcatcacgct
ttccacgcggattgtcttgtcgacgaggttcttccgcacctcagaggaaaacagagggcg
aaacttgagctcattaggaaaaggttatatcagaccggcggcgacccaagtccaagacct
ggcagtcgaaatcgagaaaatgatccaagaatagcgcctgaagattctattgaaaaatta
agggctgaccaagatgaacttgttgcttctgaatgtgttatgtgcggggagttcatgatc
agatccatcgaccagccattcataaatccagatgaagacgctttggagagttggaaataa
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