Dendronephthya gigantea (soft corals): 114523314
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Entry
114523314 CDS
T06112
Name
(RefSeq) protein patched homolog 1-like isoform X1
KO
K06225
patched 1
Organism
dgt
Dendronephthya gigantea (soft corals)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
RETICULATA-like
Motif
Other DBs
NCBI-GeneID:
114523314
NCBI-ProteinID:
XP_028399996
LinkDB
All DBs
Position
Unknown
AA seq
1445 aa
AA seq
DB search
MEGESSQEKYLCWADFSHREIVEGRAKGNRRSLWLRARMQTFLFKLGNCAQNHSVQVVMI
GLVVLVLCTLGLYKARLETNVENLWMEVGGRLEKELTYSKTYGDDYTSYDIIIQTPKTEG
QSILTAKALLKHVEVVKKAMEVKVEVFDQTWSVRDLCSKPAMPEFSNVIDKMLEKIIPCT
VITPLDCFWDGSKIYSQNITTVISKKAINWTTFDPLEFVKSLPSDITDKMDKSKMDSMLE
EAGISHGYLDRPCLDPTEPACPKSAPNKSSKKPPDIGAELTGGCTGFAEKMMIWPEEIIV
GGTKRNRSGIMRSAGALQTIISLMGEEELHNWWTMSNGYSGNAKIQHLGMKWNVEAAKTV
LNAWQRKFVRVVNEMSEPDNVKQNILAFSTTSFNDLLRDFSSPNLSLIIGGYVLMIAYAC
FTMMRSNAVQSQGCMGILGVLLVTLSIAAGLGLCSFTGISFNAASTQVLPFVILGVGVDD
MFLLSHAYRDLNSKNLRSREYSGYCLSTTGVSMMLTSITNAVAFFLAAIIIAIPALRNLC
IMAGVIIVFNFFSIVLIYPAMIGIDVKRRKDQRYDIFCCVRRDSGSNVTRFQTETPSSMT
TYNQTSLDEDSTFHQITSSANVSFGQSDAFTLPGVALRASANCNINEPMCNMLGGDIKPG
IVVVSVTSSGQNIDGDSSHKANASVNANYGRGRTFDINASSSSSSSSRTNSRRMRGAIPS
RINHGCTTSQDNKQSKNAQSSVNIALDPTTVTDKSSSGKSRHNNSKIGAMHVSANATADS
FEGESSCSSNAEVILKPENIPSSRQRSVAWQRTINSKLIKGITRLSLGHLTKEYYGPLIQ
KPFVKVVILFVFAIIFSISVYGCTQVKDGVDMTDVVPKDTKLAEFLTARDDYFSFYDISI
ITMDDFDYPNKQEELDRLYKALSKIDYIVKDEDGKLPKYWLHYFREWLEGLQKAFDEDWE
KGTITSKGPGKNATYEGKLAYKLLLSIVASNGTSQLTNEKLVENGIIHRRGFYSFLRAWY
YKDPFGYENSMMKMKPTPKLLENEDERPHGRVRPAERIKYARIPFYINGLKETADYIKLI
KQVREICDRFTNEGLPNYPRGVPFTFWEQYIWLREHLLIAVIVVLVASFVIISSILVNIW
AGTIVVMFLAMTTVEVFGFLGLAGIKLSAIPAVTLMLSVGIGVEFTVHLCMVFVASVGTR
NERVQQALEAVFSPVVHGTVSTILGVIMLAGSEFDFVVKYFFQVLAALIVLGFLNGAILL
PVILSLIGPNPEIVPLQNLNSTPCTRSWIGLTPFDRNTCSSVTNLTNDSRGNSGLHQDDT
IETEDVQLQTLDKFDSRTRKLKREASDHFDSHFQKTKKEVTPRQMYGKTLPSLTQKPKLA
GLNDDKNRSRGMAEVTATATVTVKLPVELKQERTQETCNNKAIIPRYTTSNPDMVEVVDL
EDEFV
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgaaagctctcaagaaaaatacttgtgttgggcagacttttcacatcgggaa
atagtcgagggtcgtgcaaagggaaatcgtcgttcactatggctgcgggcaagaatgcag
acatttctattcaagcttggcaattgcgcacaaaaccacagcgttcaagtcgtcatgatt
gggttggtagttcttgtcctttgcacacttggtttgtacaaagcaaggcttgaaactaac
gtggaaaatttatggatggaggttggcggacgtctggaaaaagagttaacatactcgaaa
acatatggtgacgattacacatcgtacgatataatcattcagacaccgaaaactgaagga
caaagtatcctgacggcaaaagctcttttaaaacacgtcgaagttgttaagaaagctatg
gaggtcaaggttgaagtttttgaccaaacgtggtcggtgcgagatttatgctctaagcca
gcgatgcctgaattcagtaacgtaattgataagatgcttgaaaaaattattccatgtact
gttatcacaccactggattgtttttgggatggatcaaagatttactcacaaaacatcacc
actgtcataagtaagaaagcaatcaactggactacttttgatccattggaatttgtaaaa
agtcttccaagcgatataacagataaaatggacaagagtaaaatggattcaatgttggaa
gaggctggaatttcccatggttacctcgacagaccgtgtttagatcccacggaacctgca
tgtccaaagtcagcgccgaataaatctagcaaaaagccaccagatattggtgcagaactt
actggtggctgcacaggctttgcagagaaaatgatgatctggccggaagaaatcatagtc
ggtggcacaaaacgaaataggagtggcatcatgagaagtgctggagccttacaaaccatc
attagtttgatgggtgaagaagaactgcataattggtggacgatgagcaatggatattcc
ggcaacgcaaagattcaacatttaggcatgaagtggaatgtcgaggccgcaaagaccgtt
cttaacgcttggcaaagaaaatttgtccgagttgtaaatgaaatgtctgaacctgacaat
gtcaaacagaacattttggctttctcaactacgtctttcaatgatctcctaagggacttt
tcttcaccaaacctatctctgatcattggtggatacgttctcatgattgcatatgcctgt
tttaccatgatgcgttcgaacgccgttcaatcacaaggctgtatgggtattcttggtgtt
ttattggtgaccttatctatagcagctggccttggtttatgctcgtttactggtatcagt
ttcaacgccgcatcaacacaagttttaccatttgttatactgggtgttggcgttgatgat
atgttcttattatcgcatgcatacagagatctcaacagtaaaaatctcagatccagggag
tattctggatattgtttgagtacaacgggagttagcatgatgttgacaagtattaccaat
gcagttgcgttctttttggctgcaatcatcattgccataccagcattgagaaatttgtgt
ataatggctggtgttataattgttttcaattttttctccattgtactcatctaccctgct
atgattggtattgatgtgaaacgacgaaaagatcaacgttatgatatcttttgctgtgtg
cgcagagacagcggctcgaatgtaaccagattccaaacagaaactccttcgtcaatgaca
acttacaaccaaacttctttagatgaagattcgacttttcatcaaattacatcatccgca
aacgtttcttttggtcagtccgatgcatttacattaccaggtgttgctctcagagcttca
gctaattgtaacataaatgaaccaatgtgcaacatgcttggaggagatatcaagcctgga
atagttgttgtatcagttacgtcaagtggtcaaaacattgatggagactcgtcgcataaa
gcaaacgctagcgttaatgcaaactatgggagaggccgtacctttgatataaatgcctct
agcagttcaagcagtagtagccgaactaacagcagaagaatgcggggtgccatcccttca
agaatcaatcatggttgtactaccagccaggataataaacaaagtaaaaatgcacagagt
tcagtgaatatagcattggacccaaccactgtgaccgataaaagctccagtggtaaaagc
agacataataattcaaagataggtgccatgcatgtgtctgctaacgctacagcggattct
ttcgagggagaatcatcatgttcgtcaaacgctgaagtcatattgaaaccagaaaacatc
ccgagttctcgacaacgcagcgtggcatggcaaagaacaataaattcaaaacttattaaa
ggtataactcgtcttagcttgggacatttgacgaaagaatactacggacctttgatacaa
aagccattcgtaaaggttgtgattctcttcgtgttcgccataatcttctccatctctgtt
tatggctgtactcaagtcaaagacggtgtggatatgactgacgttgtaccaaaagataca
aagcttgcggaattcttaacggccagagacgattacttttctttttatgatatttccatc
ataacaatggatgactttgattatccaaacaagcaagaagaactagaccggttatacaag
gcgctctcaaagattgattatattgtgaaagatgaagacggaaagctgcctaaatactgg
ctacattactttagagaatggcttgaaggtttgcagaaagcattcgatgaggattgggag
aaagggactatcacttcaaaaggaccgggtaaaaacgcgacttatgaaggaaagttagcc
tacaaactactcttgagtattgtagcatcgaatggaacgtcacagctcactaacgaaaaa
ttggtcgagaacggaatcattcaccgacgcggtttttatagttttctcagagcatggtat
tataaggatccgtttggttatgaaaattcaatgatgaaaatgaaaccaacaccaaaactc
ttggagaatgaagatgaaagacctcatggacgagttcgaccagctgaaaggatcaaatat
gctcgaattcctttctatataaatggtctaaaggaaaccgctgattacatcaaactgatc
aagcaagttcgcgagatttgtgatagatttaccaacgaaggacttcctaattatcctcgg
ggcgttcctttcacgttttgggaacaatatatttggcttcgagagcatttgttaattgca
gtcattgttgtgttggtcgcgagctttgttataatttcatcgattctggtaaatatctgg
gctggaacgattgtggttatgtttttggcaatgactacagttgaggtgtttggtttcctg
ggtcttgctggaattaaactcagtgctataccagcagtcactctgatgctctcagttggt
attggggtggaattcactgttcatctttgcatggtattcgttgcctcagttggaacaaga
aatgagagggtacagcaagcgttagaggccgtcttttctcccgtggtccatggcactgtg
tcgaccattttgggcgtcatcatgttagccggttcggagtttgattttgttgtaaaatac
tttttccaagtgttggcagctttgattgttttgggttttctcaacggcgcaattcttctg
cctgtcattctatcgctcattggaccaaatccagagattgttccactacaaaatctcaac
tcgacgccatgtacgagatcatggattggtttaacgccttttgatcgaaacacatgcagc
tctgtgacgaacttaaccaacgattcacgaggaaactccggacttcatcaagatgatacg
atagaaactgaagacgtacaacttcaaactctggataaatttgactcaagaactcggaag
ctaaaacgggaagcttccgatcactttgactcgcattttcagaagacgaagaaagaagtg
acgccgagacaaatgtatggcaaaaccctgccctccttaactcaaaaacctaaacttgct
gggttaaatgacgataaaaatcgctctcgtggcatggctgaggtaactgctacagctaca
gtcacggtgaaattacctgttgaactaaaacaggagaggacccaggaaacatgcaataat
aaagcaataatacctcgctataccacgtcaaaccctgacatggtggaggtcgtggatctt
gaagacgaattcgtataa
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