Dendronephthya gigantea (soft corals): 114523404
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Entry
114523404 CDS
T06112
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03030
DNA replication
dgt03410
Base excision repair
dgt03420
Nucleotide excision repair
dgt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114523404
03410 Base excision repair
114523404
03420 Nucleotide excision repair
114523404
03430 Mismatch repair
114523404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgt03032
]
114523404
03036 Chromosome and associated proteins [BR:
dgt03036
]
114523404
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114523404
DNA replication proteins [BR:
dgt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114523404
DNA Replication Termination Factors
ELG1-RFC complex
114523404
Chromosome and associated proteins [BR:
dgt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114523404
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114523404
Check point factors
HRAD17(Rad24)-RFC complex
114523404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_11
AAA_22
AAA_16
Mg_chelatase
SLFN-g3_helicase
ATPase_2
AAA_14
AAA_assoc_2
RuvB_N
Gp44_lid
AAA_24
AAA_30
DUF815
AAA_5
AAA_19
ResIII
AAA_28
DNAX_ATPase_lid
AAA_23
Viral_helicase1
AAA_7
AAA_3
TniB
bpMoxR
AAA_2
IstB_IS21
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
114523404
NCBI-ProteinID:
XP_028400108
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MDAFLKGSTSSTASLKSKVQPTKEPRAVPWVEKYRPKSVDEVAYQDEVVNVLKRTLELDQ
AAELPNLLFYGPPGTGKTSTILAIARQLYGPELMKDRVLELNASDERGIEVVRNKVKKFS
QRAISSTTPSGKKCPPFKIVILDEADSMTRNAQAALRRTMEKQNKTTRFCLICNYVSRII
EPLTSRCSKFRFKPLHDDILVKRLKEICGKESVQYESGVIEELVKVSEGDMRKAITYLQS
ASRLKGDEQVAVQDIVEISGIVPENVIDAILDSATSNSFERLDSSVKDIILEGYPGAQII
SQIHDRIVEIDHITDKQKSVITERLAIVDKCLSDGADEYLQLLDLCSTIMTQFCKDRSS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgtttttaaaaggatctacatcttctacagcatccctgaagagcaaagtgcag
cccacaaaggaaccgagggccgtaccatgggtggagaaatatcgtccaaaatctgttgat
gaagtcgcttaccaagacgaggtcgtaaacgttctgaaaagaacacttgagctggatcaa
gcagctgaacttcccaatcttctattctatggaccaccaggcactggtaaaacgtcaaca
atattggcaatagcaagacagttgtatggaccagagctgatgaaggatcgtgtgctagag
ttaaacgcttcagatgaaaggggtatcgaggttgttcgaaacaaagtgaagaagttttct
caaagagctatttcctctaccacgcccagtgggaagaaatgccctccttttaagatagtc
atcttggatgaagcagattctatgacgagaaatgctcaggcggcacttcgaaggaccatg
gagaaacaaaacaaaacgacaaggttctgccttatctgcaactatgtgagccgaattatt
gagcccctcacttcacgatgttccaaatttcgttttaaacctctacatgatgacattctg
gtaaaaagactaaaggaaatttgtggcaaagaaagcgttcaatatgaatctggagtcata
gaagaacttgtaaaagtatccgaaggtgacatgcgaaaggcaataacctacctccaaagt
gcttcgagattgaaaggagatgaacaggtcgcagttcaagatattgtcgaaatctctggt
attgttcctgaaaatgtcatagacgctattcttgattcggctacttctaattcgtttgaa
agattagattcttctgtaaaggacattatattggaaggctatcctggagctcaaatcatt
agtcagatccatgaccgcatagttgaaatagaccatattactgataaacaaaagtccgtg
atcacagaaaggctagcgatcgtcgacaaatgcctgtctgacggcgcagatgaatacctc
caattgttagatttgtgctccaccataatgacccagttttgtaaggataggtcgagttag
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integrated database retrieval system
