Dendronephthya gigantea (soft corals): 114523889
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Entry
114523889 CDS
T06112
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dgt03009
]
114523889
Enzymes [BR:
dgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114523889
Ribosome biogenesis [BR:
dgt03009
]
Eukaryotic type
Pre-60S particles
Helicases
114523889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Lentiviral_Tat
Motif
Other DBs
NCBI-GeneID:
114523889
NCBI-ProteinID:
XP_028400750
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MADCWWNLNPPLSEKTLEVLDEIGFKTMTPVQRVAIPLFLTNKDVAAEAVTGSGKTLAFV
IPIIEILVKQHKERKWKLHDILAIIVTPTRELAIQIDEVLQLFTKQLSFLRQSLFIGGTN
PRQVVRKFKKDGGNIIIATPGRLDDIFCHKPDGLDLAACAKTLEVLVFDEADRLLDMGFE
KSINSILGFLPKQRRTGLFSATQTDELEALVRAGLRNPVRITVKEKNSTTKVNQRTPVSL
ENYYSVVLPEEKMSRLIAMLRKNKDKKVIIFFSTCASVDYFTVLLKIFLKDTTAMSLHGK
MKNKRYKIFDAFRKLPSGVLVCTDVMARGVDIPEVHWVIQFDPPSNASAFVHRCGRTARL
GKQGNALLFLLPSEDSYVEFLAINQKVVLQQYELDEVSDVIPKLRKHAIKDREIYEKGIR
AFVSFIQSYSKHQCSLIFNLKELDIGKLAYGYGLLHLPRMPELKGRETVNFDPVDVDPVS
IPYKDKIREKQRQLKLEQNKVEIPQTRRPKRKTENEAWSKKKEKLKRKDLKKKLDKENEI
SRNKRKLNKLNEQEMDELTKEARLVKKLKSGKITKVEFERQVGDDDDKLE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcggattgttggtggaatttaaatcctccgttgagtgagaaaactttggaggtttta
gatgagatcggttttaaaacaatgacaccagttcaaagagtggcaattcctttatttttg
accaacaaagatgttgctgccgaggccgttactggttctggaaaaactctggcttttgtt
attccaatcattgaaatacttgttaaacaacataaggaaagaaaatggaaactccatgat
attcttgcaatcattgttactccaacaagagaacttgccatccaaattgatgaagtttta
caactgtttacaaagcagctctcatttttgaggcaaagtttatttattggaggaacaaat
ccacgtcaagttgtacgaaagtttaagaaagatggtggtaatataataattgcaactcct
ggaaggctggatgacattttttgtcacaaacctgatggcttagatcttgctgcttgtgct
aaaaccttggaagtgctggtttttgacgaagcagatcgtcttttagacatggggtttgag
aaaagcatcaacagcatccttggttttttgccaaagcaaagacgtacgggattgttctcg
gcaacccaaacagatgaactggaagcgctcgttagagcaggattgcgcaaccctgtccgc
attactgtcaaggagaaaaatagcactactaaggttaaccaaagaacgcctgtttcgtta
gaaaattattactcggtggtgttgcctgaagagaaaatgtcgcggttgattgcgatgctg
agaaaaaacaaggacaagaaggtgatcattttcttcagtacatgtgcaagcgttgactat
ttcaccgtgcttttaaagatattcctgaaagatacaacagcgatgtcgctacatggaaag
atgaaaaacaaacgatacaaaatcttcgatgcgttcagaaaactaccgagcggcgtattg
gtgtgtactgatgtaatggcgagaggtgttgatatacccgaagttcactgggtaattcag
ttcgacccaccaagcaatgcaagtgcattcgttcatcgctgtggaagaacagcaagactt
gggaaacaaggaaacgcccttcttttcttattaccaagtgaagacagctacgtggaattc
ttagcaattaatcaaaaggttgttttgcaacaatacgagttggatgaagtctcagacgtc
attcctaaactaagaaaacatgcaattaaagacagagaaatttacgagaaaggtatccga
gcttttgtctccttcatccaatcctacagcaaacaccagtgtagtttgatctttaatctc
aaagaattggatattggaaaattagcgtacgggtatgggttgctgcatctaccgcgcatg
cccgaactaaaagggcgggaaactgtgaactttgaccccgtcgatgtcgaccctgtgtca
ataccgtataaggacaaaatccgagaaaaacagaggcagttaaaactagaacaaaataaa
gtggaaattccgcaaaccaggagacccaagcggaaaacggagaatgaagcctggtctaag
aaaaaagagaagttgaagagaaaggatttgaaaaaaaagttggacaaggaaaatgagatt
agtagaaataagaggaagttgaataaattaaacgaacaggaaatggatgaactgaccaaa
gaggcgaggttagtgaagaaactgaagtctgggaaaataaccaaggtggagtttgaaaga
caggttggagacgatgatgataaactggagtga
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