KEGG   Dendronephthya gigantea (soft corals): 114524651
Entry
114524651         CDS       T06112                                 
Name
(RefSeq) protein SMG9-like
  KO
K18735  protein SMG9
Organism
dgt  Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:dgt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dgt03019]
    114524651
Messenger RNA biogenesis [BR:dgt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     114524651
SSDB
Motif
Pfam: Smg8_Smg9 AAA_30 NB-ARC MMR_HSR1 AAA_14 nSTAND_NTPase5 AAA_18 nSTAND6 MeaB ABC_tran URGCP_GTPase KAP_NTPase RsgA_GTPase AAA_19 Thioredoxin_11 nSTAND3 SRP54
Other DBs
NCBI-GeneID: 114524651
NCBI-ProteinID: XP_028401597
LinkDB
Position
Unknown
AA seq 497 aa
MDDRGFRGDAGSKAKGGRSRRDRGFREPRERRPRPQTKAGVEQFPPGAQQGQMKILTKTT
NDKGAETGKSIQIKPRDEKVDIVPPQLARSPVSSLQKTNSSVKSSGEHQTHGSQSLAAHS
GRHQPHRGSSGVVSPGPSSAVLSGNDSITATGTGAKIQNDSLKCFKIVDEKLHWNDQALE
TLTDQSDFLVVGVLGCQGVGKSTILSLLANRMALNDKRFCIFTPQSRQTEEMSINETSGI
DMSITNERVIFLDTQPILNASILDNVIRHERNIPSEVTSAENYAELQSLQITTFLFTVCH
VVLVVQDWFCDLNVMRFMKTAEMLKPTSGAHTAAHEGSSNLPEEFDEYYPNIVFIYNKCS
REDFEAHNVENMLLATDAIFQNSRLRTKTSASMLLEGTFPFSKHLEQYSDVNLFLLPIAD
NLIRKTGSEICFSGTSFHGHPNLDVLIQLLRSQIFSSPRHHLTHHQLTEKNWFHFAARSW
EMTKKSALLSEYNRLLP
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggatgatcgtggctttagaggggatgctggaagcaaggcaaagggcggcaggagtagg
cgtgatcgaggatttcgtgagccaagagaaaggagacctagaccacaaacgaaagctggt
gttgaacaatttccacctggagctcaacaagggcaaatgaaaatactaactaaaacaacc
aacgacaaaggtgcagaaacaggtaaatcaattcaaattaagccaagggatgaaaaagtt
gatatagtgccaccccagttggcaagatcccctgttagttcacttcaaaaaacaaactcc
tcagtcaaatcatctggtgagcaccaaacacatggcagtcagtcattagcagcacattct
ggtcggcatcaacctcatcgtggtagtagtggtgttgtctcacctggaccatcaagtgca
gtgcttagtgggaatgattccataactgctacaggaactggtgcaaagatacagaatgac
tcattgaagtgttttaaaattgttgatgaaaaactgcactggaacgatcaagcattagag
accctaacagatcagagtgactttcttgttgttggagtgttgggctgccaaggtgttggg
aaatccaccattctttctctactagcaaatagaatggctttaaatgataaaaggttttgt
attttcacaccacaatcaagacaaactgaggaaatgagtataaatgagacttcgggtatt
gatatgtctatcacaaatgaaagagttatctttctagacacgcaaccaatactcaacgct
tccattttggataatgtcatccgccatgaaaggaacataccttctgaagttacatcagct
gaaaactatgctgaattgcagtcactacaaataacaacatttttattcaccgtttgccat
gttgtgttagtggttcaagattggttttgtgatcttaatgtaatgcgatttatgaaaaca
gcagagatgttgaagcctacgtcaggagcccatactgcagctcacgaaggttctagtaat
ttacccgaagaattcgatgaatattacccaaatatagtttttatttacaacaaatgctcg
agagaggattttgaggcacataatgttgaaaatatgcttcttgcaacagacgcgatcttt
caaaattccagactaagaacaaaaacatcggcgtctatgcttttggaagggacgtttcca
ttttctaaacatttggaacaatattccgacgtcaacctattcttgttacctatagctgac
aatctgattaggaaaactgggagcgaaatttgtttttctgggacatcttttcatgggcat
cccaacttagatgttcttattcaactactgaggagtcagatattttcaagcccaagacat
catttaacccatcatcaacttacagaaaagaactggttccacttcgcagcacgatcctgg
gaaatgacaaagaagtcggcgctgttgtccgagtataaccgcttactcccttga

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