Dendronephthya gigantea (soft corals): 114524992
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Entry
114524992 CDS
T06112
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIP12-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114524992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dgt04121
]
114524992
Enzymes [BR:
dgt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114524992
Ubiquitin system [BR:
dgt04121
]
Ubiquitin ligases (E3)
HECT type E3
114524992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
Arm
ARM_ARMC5
RIX1
Motif
Other DBs
NCBI-GeneID:
114524992
NCBI-ProteinID:
XP_028402054
LinkDB
All DBs
Position
Unknown
AA seq
1949 aa
AA seq
DB search
MDNSLEREELGGNVKSRRGKESVKRKTPNNSEQSKNKRPKTTSGPLASSARSTSVPVLPS
SPISHRTRSCTSLLTLGASASRSSSPAASSDLSRRTVSNRRSDINVSYPANERNSRRGKT
SSGSTRGGESEQPGSASDLTPSASVPSLTARGKRSSVPGLHKPTSSVSLPDTRSDSTASG
SSTSLPHVKKHVARAASSSASSLETSTELYDHAGVGQRRLRLRKQLATEQEATSSNPKLK
RSEQRSQESSSSSSARASVHARLKKRISLFQLRTNEEATTADPSDLSEPSGLRQSLRKKK
ATGSCASNNSRRAARGKNSFFQRRQRQNMSSDDVAPEQPSTSGQDRSSELSQGASGSQGS
DDGRLDEDLSRLQALLEARGLPPHLFGSLGPRMHQLLHRSMSGGVNGKVQQLLTGIQSTD
ECQQLQAVMELCQILVMGNEDTLGGFPIKQAVPALINLLSMEHNFEMMNHACRALTYLME
ALPRSSVVVVEAVPTFLQKLQSIQCMDVAEQALTALEMLSRRHGKAILQCEGMSACLTFL
DFFSITAQRAALAIAANCCHFVSSDDFHLITTAIPILSAKLQIQDKKSIESCCLAFTRLV
DNLHNDEKLLRELAHHSLLTNVQQLLVVTPPVVSTGTFVAVLRMLALMCANCPYIAVQLL
KNNIAETLRFLLMGANELKETESPELSPRTPQEFYEITCLISELLPNLPSDGIFSFDSLL
SKGHRPEQAYWQWKDDQNVWHSYSWIDSRIIEAAHQGGEDELSLNTLGRSYIVEFNSMQQ
INEDTGTSRPIQRCSRAESANAALSVSTAKKEDERIVFLQEGSEISSNFTLTLFGELNEV
HNSSVGPAVRHKCLNGILRMLYYSPPELLNKLIEKFPVSSQMAGMLASSDLRTVVNALQM
ADILMQKLPEYFHVHFRREGVMHKIHELATASLRSRATRQEEGGESPVEKEKVVDEEMNE
AGSQDGFLNHSPPTSRKFSDVLRKKRRSKRISYKKSTSLETPREGGEATHPRSSSMSSVP
TAMLSSLRGVSLKNTTTPASKTPKTQASSGCSESKYKIKVWIKQQAIKFTSTYFENEQSE
SHPALGILHRLSNASSELGMGCNEDHQALKAIGQVLSENEKSASAFEIIHSGLVPKLLSY
LNRPTGKSRSSHEKHLKTFLQAFLGCPPSEDVNECFHGPDDDKRVLFTILVQKLHACVNQ
QEQFPVKIHDAPGGCGNGSRGLQTLRFFNSHQIKCFLQRHPGSTNVKNWRGGPVKIDPLA
LVQAIERYLVLRGYGRVREDADEEGSDDDLSEEDIEEALAFQSPGAQSRHYLEIMIGDKV
LPYNMTVYQAVKQYGQADEDKDQDEEGVLGRPSIWVGTHTIHYRASQDTGESSSSSSRTP
NNATPSKTARKSQGKRNKDSLRDNNNGASSSMSIIASSITAQNELKDASVESIRLLQTLF
NLNTKWGTVYELDDRGALIPPAEFISTKLTAKASRQLQDPIAIMTGNLPTWLGVLAHECP
FLFPFECRQQLFYCSTFDRDRAMSKLQETIPDLLSAEGTDRVTPRLERKKRTVSRDNIFK
QAEEIVNEVGSSRAILEIQYQDEVGTGLGPTLEFYALVSREFQRADQAIWRGETVADDED
IQKEVSYVFSSVGLYPIPIAKNTKASQVTKLKSKFRFLGKFIAKAIMDFRMLDIPLSQAF
FKWMLGKESMLDYRDLHHIDPVLAKSVAQLRDIVHKRKRLEADTSHTADSLKLAVESLTL
DGLPIEDLDLDFRLPGTTIDLKKGGKDIPVTIHNLEEYIKLVVQWTLIDGVTKQMQAFKE
GFETVFPLSSLSCFTPEEMDLLLCGSTAETWDVKSLMENCRPDHGYTHDSRAVKFLFEIL
SSYDKDERRRFLQFVTGSPKLPVGGFKRLTPPLKIVRKTLEASLCPDGYLPSVMTCMNYL
KLPDYSTKEIMKEKLHQAAVEGQHSFHLS
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atggacaatagccttgagagggaggaattaggggggaacgtaaaatccagaagaggcaaa
gaatcagtgaaacgtaaaactccaaataacagtgaacagtcgaaaaataaaaggccaaag
acaacatcaggaccattggcaagttccgctaggagtacctctgtcccagttttaccaagc
tcaccaatcagtcacagaacccgaagctgtacatctttgttaacactgggggcttcagcg
tccagatcgtcatcacctgctgctagttctgacctcagcagaagaaccgtttctaatcgt
cgatctgatatcaacgtttcctatccggcgaacgaaaggaattcaagaagagggaagacc
tccagtggcagtacaagaggtggggagagtgaacagcctggcagtgcaagtgatctcaca
ccatcagcaagtgtaccttcgctaaccgcgcgtggtaaacgttcgtctgttccaggtctt
cacaaacctacatcatcagtgagtctacccgatacaagatctgacagtacagcatcggga
tcttctacgtcgcttcctcatgtaaagaaacatgtagcaagggcggcgagcagcagtgca
agctccttggagacgtcgactgagctgtatgatcacgcgggtgttggtcagaggcgtcta
cgactgcgaaagcaactggcaacagagcaggaggctacttcatctaatcctaagctaaag
cgatccgagcaacggtcacaggaaagcagtagtagcagcagcgcacgtgcgtctgttcat
gcgaggttaaagaagcgcatctctcttttccaactcaggacaaacgaagaggctactaca
gctgatccaagtgatctgtccgagccatcaggcttgcgacagtcgcttagaaagaaaaaa
gcaacgggatcctgcgcaagtaacaatagtcggcgagctgctcgggggaaaaacagcttt
tttcaacgccgacaaaggcaaaatatgtcatcagacgatgtcgccccagagcaaccttca
acgtcaggtcaagacagatctagcgaactttctcaaggggcaagtggttctcaaggaagc
gacgatggaaggcttgatgaagatctttcccgtttacaagcactgttggaagcacgtggc
cttcccccgcacttgtttggttctttgggaccaagaatgcatcagcttcttcataggtca
atgagcggcggtgttaatggcaaggttcaacagttactgactggtatacaatcgacagat
gaatgccaacagttgcaggccgttatggaactctgccagattcttgtgatgggtaatgaa
gatacattaggaggtttccctattaaacaagcagttcctgcgttgatcaaccttttatca
atggagcacaactttgaaatgatgaatcacgcttgtcgtgcgttgacatatcttatggaa
gctcttccaagatcctccgtcgtggtagtcgaagccgtcccaaccttcttacaaaagctg
caatcaatacagtgcatggatgtggctgaacaggctctaaccgcactagagatgctttct
agaagacacggaaaagccattctgcagtgtgagggaatgtctgcatgtttaacctttctg
gatttcttctcaataaccgctcagagagctgccctagctattgctgctaactgttgtcac
ttcgtcagcagtgatgactttcacctgataactactgcgatacctattttaagtgcaaaa
cttcaaatccaggataaaaaatctatagaaagttgctgtcttgcctttacaagactggtt
gataaccttcataatgacgagaaactgctacgggaacttgcccatcatagtttactgaca
aatgttcaacaattgttggttgtaactcccccggtggtgagtacagggacgtttgttgct
gtacttcgcatgttagctctgatgtgtgcaaactgtccgtacattgctgttcaacttttg
aaaaacaacattgcagaaacactgaggtttctcttaatgggagcgaatgaattgaaagag
acagaaagtcccgagctttcacccagaacgccacaagaattttatgagattacttgtctt
atcagcgaattacttcctaatctaccttcggatggcatattttcttttgactcgttgctg
agtaaaggccatagaccagagcaagcctattggcagtggaaagatgatcaaaatgtctgg
cattcgtattcgtggattgatagcagaatcatcgaggctgctcaccagggtggagaggat
gagctgagtttgaacacactaggaagaagctacatcgttgaattcaattcaatgcaacag
attaatgaagacactggcacatcgcgtcccatacagcgttgttcacgcgcggagtccgct
aatgcggcgctgtcagtgagtactgcaaagaaagaagatgaaagaattgttttcttacaa
gaaggcagcgagatctcatccaacttcacactaactttatttggagaactgaacgaagtc
cacaactcctcggtcggtcctgccgtacgacacaagtgtttgaacggcatactaagaatg
ttgtattactctccgccagaacttctaaacaaattgatagagaaatttcctgtctcgtcg
caaatggcgggcatgctcgcgtcgagcgacctgagaacagtcgtaaatgcgttgcaaatg
gcggatatattaatgcagaaacttcccgagtattttcacgtgcattttcgccgcgaaggt
gttatgcacaaaattcatgaacttgccacagcctccttgaggtcccgggcgacgaggcag
gaagaggggggagagagtcctgtcgaaaaagagaaagttgtcgacgaggagatgaatgag
gctggctcacaagatggatttctgaatcattcgcctccaaccagtcggaaattcagcgat
gtattgaggaagaaaagaagatcaaagcgcataagctacaagaagtcaacgtcattagaa
acacctcgagagggaggagaagcaacacatcccagatcatcctcaatgtcttctgtacca
accgctatgttgtcttcgttacgcggtgtttctctcaagaataccaccacacctgccagt
aaaacacctaaaactcaagctagcagcggctgtagtgaaagcaagtataagataaaagtt
tggatcaagcaacaagcaataaagtttacttcaacatattttgaaaacgaacaaagtgaa
tcgcaccctgctctgggtattcttcacaggcttagcaatgcttctagcgaactcggaatg
ggctgcaatgaagatcaccaggctttaaaggcaatagggcaggttctgtcggagaacgag
aaaagtgcgtcagcgtttgaaattatccacagtggccttgtaccaaagttactcagttat
ctaaatcgaccgacggggaaatcacgttcttctcatgaaaaacatctaaagacctttctg
caggcattccttggttgtcctccttcagaggatgtgaatgaatgttttcatggccctgat
gatgataaaagagttttgttcaccattcttgttcagaaacttcatgcctgtgttaaccaa
caagaacagtttcctgtcaaaatccatgatgcaccaggcggttgtggtaatggctcacgg
ggtcttcagactttaagattctttaattctcatcaaatcaagtgcttccttcagagacat
ccaggcagcaccaatgtcaagaattggcgtggcggtcctgttaagattgatccacttgcc
cttgtccaggctattgaaaggtatttggttttgcgaggatatgggcgcgtaagagaggat
gctgacgaggagggtagtgacgatgatctttctgaagaagatatcgaagaagcgttggct
ttccagagcccaggcgcacaaagccggcattacctggaaatcatgattggagacaaagta
ttaccttacaatatgaccgtgtatcaggccgtcaaacagtatggacaggctgatgaagat
aaagatcaagatgaagagggtgtcctcgggagaccaagtatttgggttggtacgcatacc
attcattatcgtgccagtcaagatacaggtgagagcagcagttcgtccagtaggacacct
aataatgccactccatcaaaaacagcaaggaaatctcaaggaaaaagaaataaagactcc
ttgagagataacaataacggcgcctcgtccagtatgtctataattgcgagttcgataact
gcacaaaacgaactaaaagatgcgtctgtggaaagcatacgtcttcttcaaacacttttc
aacctcaacacaaagtgggggacagtttacgagttggatgacagaggtgctttgattccc
cctgctgaatttatcagcacaaagctcaccgcgaaagcttcgcggcaacttcaagatccg
atcgcaattatgactggcaatcttcctacctggcttggtgtattagcacacgaatgtccg
tttctgtttccgtttgaatgtcgtcaacagttattttactgcagcacgtttgatagagat
agagcaatgagtaaattacaggaaacaattccagatttgctgagtgccgaaggaactgat
cgagtcactccacgtttagaaagaaaaaagcgcactgtctcccgtgataatatcttcaaa
caagccgaagagatcgtcaacgaggtcggaagttctcgtgcaattttggaaatacaatat
caagacgaggttggaactggtcttggccccacattagagttttatgcgttagtatccagg
gagtttcaacgggctgaccaggctatttggcgaggcgaaactgtagcagatgatgaagat
attcagaaagaagtttcgtatgttttctcttcagtgggactctatcccattccgattgct
aagaacactaaagcaagccaggttacaaaactaaaatcgaaattccgtttcttgggaaag
tttattgcgaaagccattatggactttcgtatgttggacattcctttaagccaggcattc
ttcaaatggatgcttggtaaggagagcatgttagattatcgtgatctgcatcatattgac
ccggtccttgccaagtctgtcgcccagcttcgagatattgttcacaaacgtaagagactt
gaagcggatacttcacatacagcagacagtctgaagttagctgtggaatccttaactttg
gatggtttgcctatcgaagatcttgacttagatttcaggctaccaggaactacaatagac
ctcaagaaaggtggaaaagatatcccagtcacaatacacaatttagaggaatacatcaag
ctggtggtacaatggactttgattgatggagttacaaaacaaatgcaagcctttaaagaa
ggcttcgagaccgtgtttcccttgtccagtttaagctgcttcacaccagaggagatggat
ttactactgtgtggaagcacagctgaaacatgggatgtcaaaagtttaatggaaaactgc
cgaccggatcacggttatacacatgacagccgtgctgtcaagtttctattcgaaatactt
agttcatacgacaaagacgaaagaagacgttttctacaatttgttactggaagtccgaaa
ctgcctgtcggaggtttcaagcgacttacaccaccgttaaagatcgttcgcaaaacgctt
gaagcatctttgtgcccggatggttatcttccatctgtcatgacctgcatgaactacctc
aagctaccggattactctacaaaagaaatcatgaaagaaaaattacatcaagctgctgtg
gaaggccaacattccttccatctttcataa
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integrated database retrieval system
