Dendronephthya gigantea (soft corals): 114525049
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Entry
114525049 CDS
T06112
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114525049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgt03021
]
114525049
Enzymes [BR:
dgt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114525049
Transcription machinery [BR:
dgt03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
114525049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
114525049
NCBI-ProteinID:
XP_028402059
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MVKEQFRETDVARRVSHLEFGIFSPSHMQKNAQIQCVSKNLYMPENARKPAGYGVLDPQL
GISNKDRSCTTCGKQLADCVGHFGFIDLELPVCHVGYFKATIAILQCVCKSCSRVLLTPD
DRISTLESLRRPALSNLARKGILKKVNTKCRKLSQCPYCESLNGNVKKVGMMKIVHEKYK
TTKKILHPVISEFHASFQNALEHNKELEPLLKKAQEILNPLRVLTIFKDVPDEDCPLIGM
LPSISRPEDLILTRIVVPPVCIRPSVVSDLKAGSNEDDVTMKLTEIIFLNDVLRKHRSGG
AKVQMIIEDWDFLQLQCALYINSETTGIPLSMQPKKPTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDQVAVPIHVAKILTYPEKVTKANIDFMKKLVENGATAHPGANF
VIQKDTNIKKFLKYGNRKFIAKDLKLGDTVERHMIDGDIVLFNRQPSLHKLSIMSHFAVV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALTLMGVKSNLVTPRNGEPLIA
AIQDFITGAYLLTQKDVFLDRSHMTQLCAAMLAGKDIDMRINLPPPAIFKPVKLWTGKQV
FSVLLKSHREASVKMNLRVKGKQYSSGEELCKNDSFVVVHNSELMCGALDKAVLGSGSKN
NVFYVLLRDFGQQFAADAMWKVARVCPFFLSNRGFSIGIGDVTPGHGLLKAKDELLNHGY
TKCDEFIQDFKENRLQTQPGCSEEETLEAVILRELSVIRDHAGKACLRELHKSNSPLTMA
VCGSKGSFINISQMIACVGQQALSGKRTPNGFENRSLPHFRKFAKFPGAKGFVKNSFYSG
LTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLSIQYDMTVRNSVGEIVQFV
YGGDSLDPASMEGKDRPVDFDRILAHVQSSVPDQESCVLSAAEIKDQTASVLNEEKYQTC
SDEYKRGLRKFTDKLSDKVADLHSRYSFPETMQSKPVKGRLGLAVEWVSRCTSLQLRKFI
DICHEKFMKAKIEPGTAVGAVCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIIN
ASRSISTPIISAGLVNESDPDEARIVKGRLEKTTLGEVTEYVEEVFAPDSCVLFIKLDLN
RIKLLKLEVNAETIVFSICTAPKLKVKRQHIHILSPCIICVYPQENSKSALHFVMQTLKK
SLPNVVIKGMKGVTRAIIHIDEEKSKPGQEKYKLLVEGNDLRGVMATVGVKGTATSSNNT
IEVERVLGIESARVTIINEIVYTMTNHGMSIDARHVMLLADLMSFKGEILGITRFGLAKM
KESVLMLASFEKTADHLFDASFHGRKDSIDGVSECIIMGIPMTIGTGMFSLLHKSNIDST
PPQRPLLFDNPEFHIPGCEPR
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacagttcagagaaacagacgtcgcgcggagagtaagccatctggagttt
ggaattttctcaccatctcacatgcaaaaaaatgcacagatccaatgcgtcagtaagaac
ctgtacatgccagagaatgcaaggaaaccagcagggtacggggtgctggatccacaactg
ggtatcagcaacaaggatcgatcttgtacaacctgcgggaaacagcttgccgactgtgtt
ggtcactttggatttattgatcttgaattgcctgtctgtcatgtgggatattttaaggca
acaatagccattcttcaatgtgtttgcaagagttgcagtagagttttgctgacaccagat
gacaggatttcaacgttggaatctcttcgccgtcctgcacttagtaatcttgcacgcaaa
ggaatactgaagaaagtcaatacaaaatgtcgcaagctgtcgcaatgcccgtactgtgag
agtctcaacggaaatgtaaagaaagtaggaatgatgaaaattgttcatgagaaatataaa
acgacaaagaagattttgcatccggtgatctcagagtttcatgcctcatttcaaaatgct
cttgaacataataaagaactggaaccattattaaaaaaagctcaggaaatcttaaatcca
ttgagagttttaacaattttcaaagatgttcctgatgaggattgtccattgattggaatg
ttacccagtatttcccgaccggaagatcttattctcactagaattgttgttcccccagtt
tgcatcagaccatctgttgtcagcgatcttaaggcaggcagcaatgaagatgatgttacg
atgaaactgacagagattatatttcttaatgatgtccttcgcaaacaccgttcaggcggt
gccaaagttcaaatgattattgaagattgggattttctacagctgcagtgtgctttgtat
ataaacagcgaaacaactgggattcctttgagcatgcagcctaaaaaacccacaagaggc
ttcgtgcaaagactaaagggaaaacaaggtcgttttcgtggtaacctttcaggaaaacga
gtcgatttttccggaagaactgtcatctcaccggatccaaatctaagaatcgatcaggtc
gccgttccaatccacgttgcgaaaatcctaacgtacccagagaaggtaacgaaggcaaat
atagattttatgaaaaaactggtcgagaatggagcgactgcccaccccggagcaaacttt
gtcattcaaaaggatacgaacattaaaaagtttcttaaatatggaaacagaaagtttatc
gcgaaggatttgaagttaggggatactgtggaacgtcatatgattgacggtgatattgtg
ttgtttaaccgacaaccgtcgctgcacaaactcagcattatgagtcattttgcggtggta
aagcctcacagaacttttcgtttcaacgagtgtgtttgcactccttacaacgctgatttc
gacggcgatgaaatgaatttacatttacctcagacagaagaagctagagccgaggctctc
actctgatgggggtgaagtcaaatcttgtcaccccgaggaacggggagcccctgattgct
gcgatacaagattttatcacaggtgcctatctgcttacacaaaaagacgtattcttagac
agaagtcatatgacacagttgtgtgcggccatgttggcgggcaaagacattgatatgagg
ataaatcttcccccacctgctatttttaagcctgttaagctgtggacgggcaaacaagtg
ttcagtgttttgttaaaatctcaccgggaagcttcagtcaagatgaatctgcgggtgaaa
ggaaaacagtacagcagtggagaggagttgtgcaagaatgactcctttgttgttgttcat
aacagcgagttaatgtgtggtgcactagacaaggcagttttgggatctggttctaagaac
aacgttttttatgttctcctgcgtgactttggccaacagtttgccgccgatgcgatgtgg
aaagtggctcgtgtctgtcctttcttcctctcaaacaggggcttctcaatcggtattggc
gacgtcacacctggtcatggtttgctgaaggcgaaggacgagctgttaaatcatggttac
acgaagtgcgacgagtttattcaggattttaaagaaaacagattgcagactcaacctggt
tgctcagaagaagaaacactagaggctgttatccttcgtgaattgtctgtgattcgagac
cacgctggaaaggcctgtcttcgggagctccacaagtccaatagccccttaacaatggct
gtctgtggatcaaaaggatccttcatcaacatatcacaaatgattgcttgcgttggacaa
caggctctgtcaggaaaacgtactccgaacggcttcgagaatcgatccttgcctcatttt
cgaaaattcgccaagtttccaggtgcaaaaggctttgtgaagaacagtttttattctggg
ctgactccaacagagtttttctttcacacaatggccggacgtgaaggcttagttgatacg
gcagttaaaacagccgaaactggttacatgcaaagacgtcttgttaagtcattggaagat
ttatctatccagtatgatatgactgttcgaaattcggtgggggaaattgtccagttcgtt
tatggcggggatagtctggaccctgcttcgatggagggaaaggatagaccagttgatttt
gaccgtatcttggcgcatgtccagtcatccgtgcccgatcaagaatcgtgtgtattatca
gccgcggagattaaagatcagactgcttctgttttgaacgaggaaaaatatcaaacttgc
agcgatgaatacaagagaggattgaggaaatttacggacaagttgagcgataaagtggct
gatttacactctcgttatagttttccggagacaatgcaatccaaaccagtaaaaggaaga
cttggtttggctgtggagtgggtgtcaagatgcacctcacttcagttgcgaaaatttatc
gacatttgtcacgagaagtttatgaaagcgaaaattgagcccgggacagcggtcggcgcc
gtgtgcgcgcagagcatcggagagcctggtacccagatgaccttaaagactttccatttc
gctggagtggcctctatgaatattaccctgggagtccctcgtatcaaggagatcatcaac
gcgtcacgttctatcagtacgccaatcatatcggcgggtctcgtcaacgagtcggacccg
gacgaggcgcgcatcgttaaggggagactggagaagaccacgctgggagaggtgacagag
tatgtggaagaagttttcgctccagacagctgtgttttatttataaagttagacttgaat
cgaataaagcttttgaagcttgaggttaatgcagagacaatcgtgttttccatttgcacg
gcgccaaagctcaaagtaaaacgtcagcatattcacattttgagtccgtgtatcatctgc
gtttatccacaagaaaacagcaagagtgccttgcattttgtcatgcaaacgctgaagaaa
tctttacctaatgttgttatcaagggaatgaaaggcgtgacgcgtgctattatccatatc
gacgaagagaaatcgaagcctggtcaggagaaatataaattattggtagaaggaaatgac
ttgcgaggtgtcatggcaaccgtgggtgtgaagggaacagcgacatcttcaaacaacact
attgaggtcgagcgtgttctcggtattgagtctgcgcgagtaacgattattaatgaaatt
gtctatacgatgacgaatcacggtatgagtattgacgcccgccatgtcatgctgttagcg
gacttaatgtctttcaagggcgaaatccttggcataacaagatttggtttggcgaaaatg
aaagaaagcgtacttatgttagcctcgtttgagaaaactgctgaccatctattcgatgcc
tcgttccacggaagaaaggactccattgatggagtcagcgaatgcattataatgggaatt
cctatgacaatcggcacggggatgttttcccttcttcacaaatcgaacattgatagcaca
ccaccacagcgacctctgttgtttgataaccctgaatttcacatccctggctgcgagcca
aggtga
DBGET
integrated database retrieval system
