Dendronephthya gigantea (soft corals): 114525427
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Entry
114525427 CDS
T06112
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114525427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dgt03036
]
114525427
Chromosome and associated proteins [BR:
dgt03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
114525427
REST complex
114525427
Heterochromatin formation proteins
Other heterochromatin formation proteins
114525427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
114525427
NCBI-ProteinID:
XP_028402561
LinkDB
All DBs
Position
Unknown
AA seq
1284 aa
AA seq
DB search
MKRTREEHEKVYGQHRGFSHPVLAPAPVGLPGNFDPIPENIAVSMGQYQSNPQIPPQNYP
VAGPAGPGQGHSPLPSHPQAHIHPPGAQAHMQGPGGPGQQQFQRLKVEDALSYLDQVKMQ
FGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSNLFKGHPELIVGFNTFLPPGYKIEVHP
NDANSISYTTPHQTTLQKTSLTGQSVHTISLTGNHGAHNVSHVPSFPLHPSSQQPQQQQT
SQQPPTTHVQQQQSQHQQLSTLSQHATSQQQGKLPTNNLPQPQQPIPHQNQQQPRGLHSP
PTNQNQPQQPVEFNHAINYVNKIKTRFQGQPDTYKAFLEILHTYQKEQKNIKDAASQGGI
IDPDGPHITEQEMYVREAKLANDVYKQVAKLFKNQEDLLQEFSQFLPDANGAQLSGLSAL
SKRAHHQISNFTSSYGPPSKKQALSSNSVKRNLGQIRRSSTSLQGKVKSKSSGIKEISLS
DPTSFGSVAEFAFFDKVRKALRSQKVYEDFLRCLKLFNQEVISRADLVQLVSSFLGKFPE
LFKWFKEFLGYKDSSPMETPGFKERTSGELAHLEIDYSSCKRCGTSYRALPKSYTQPKCS
GRTALCREVLNDTWVSFPSWSEDTTFLGTKKTQYEEYIFRCEDERFELDGILEVNLSTIR
VLEAVQKKLNHMTSEEQQKFRLDSSLGGMSEVIHKKAIQRIYGDKAPDIIDGLKKTPAVA
VPLVLKRLKIKEEEWRAAQRLYNKTWRDQNEKYYLKSLDYQGMTFKQNDLKAMRSKSLVT
EIENIYDEKQEQAAEGNADLSGPHMIFTYKDKSILDDAAGLIVHHMKRQTGIHKEDKSKI
KSLLSIFVPDLFFAPRGELSDDEDSVKDSNGNGRAELSNGLPEAESDDAYNLYFVNNNWY
IFLRLHQMLCERLLKMYQRSVEIAEGEASDKKQRKESTAVALRLKAPTDIDVEEYYPAFL
DMVRNLLDGNMEMSSFEDTCREMFGVHAYIVFTIDKLVQNIVRQLQTIVVEETCVQVKEL
YQQEQTREGAGGNSATQVLRQEEEMSYQKKAETLLNDECCYKFIVHKDKTIITISIELIE
TEDTHSEDMLVIGKWNDYVDKYVINQEIPPEVTERLKVKPIFLPRTAKHKRSKTATDGER
TGVESDERGCSPSAGEGEEMPPDIVNEDGMECKISSNSYKLEFVAGGLNFFYRKKSLPRA
RQNYPKVTRKLTENFQRWLESWAMDNVSREQKSTCDQWLVGHSEGLQQCTTTKTNVRDNF
KSYTKYLVEWPAPPVPSSNSTQAQ
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaactcgagaagagcacgagaaagtttacggtcaacacaggggattttcgcat
ccagttttagcaccagctccagttggccttcctggtaattttgatcctataccagaaaat
attgctgtatccatgggacagtatcagtctaatccacagatacctcctcaaaattatccg
gttgcaggacctgctggtccaggacaaggtcatagtccattgccttctcatccacaggct
cacattcacccgcctggagcacaagctcatatgcagggaccagggggccccggccagcaa
caatttcaacgactaaaggttgaagatgctttgtcctaccttgatcaagtgaaaatgcag
tttggtaatcaacctcaagtgtacaacgacttcttggatatcatgaaagaatttaaatcg
caaagtatcgacacacctggtgtaatcagccgtgtctccaacctcttcaaaggtcatcct
gaattgattgttggttttaacaccttccttcctcctggctataaaatagaagttcaccct
aatgacgcaaactctatatcttacacaaccccacatcaaacaactttacagaagacgtca
ttgactggtcagtctgtccatacgatcagcctgacgggcaatcatggtgctcataatgta
tcccatgttccatccttcccactccatccttcgtcacaacaaccgcagcaacagcaaacc
tctcaacaacctcccacaactcatgtccagcaacagcagtcccagcaccagcagttgtca
acattatctcaacatgcaacgtcgcaacaacaggggaaacttccaaccaacaatcttcca
caaccacagcagccaataccacatcagaatcaacaacagccaagaggtcttcattcacct
ccaacaaatcaaaatcagcctcaacaacccgttgagttcaaccatgcaatcaattatgta
aataaaataaagactcgcttccaaggacagccagatacgtacaaggctttcttggaaata
ctgcacacatatcagaaagaacagaagaacatcaaagatgctgcctcgcaaggagggatc
atagacccagacggaccacatatcacggagcaagagatgtatgtgcgtgaagcaaaactt
gcaaacgatgtttacaaacaagttgcaaaattgttcaagaatcaagaagatctacttcaa
gaattcagtcagtttcttccagatgctaatggcgctcaattgagcggactgagtgctctt
tctaagcgagctcaccatcaaatttcaaatttcacgtcatcgtatggtccgccgagtaaa
aagcaagcattgagttcaaactctgtgaagagaaatcttggccagatacgaaggtcatcc
acctctctccagggcaaggtgaagtcaaagtcatctggaataaaggagataagtttatct
gatccaactagttttggttccgttgcagagttcgctttctttgacaaggtgaggaaggca
ctgcgcagtcaaaaagtttacgaagatttcctccgttgtctcaagttgttcaatcaagaa
gttatctccagagctgatttggttcaactggtgtcctctttcctagggaaatttcccgag
ttgttcaaatggtttaaggaatttctcggctacaaagattcaagtccgatggagactcca
ggttttaaagagcgcacctcgggagagctagcccatcttgagattgattactcatcttgc
aaacgttgtggtacaagctatcgagcacttcccaagagttatactcaaccaaaatgcagc
ggacgtaccgccttatgccgcgaggtcctcaacgacacctgggtgtctttcccgagctgg
tccgaggacacgacattcctgggaacgaagaagacacaatacgaagagtacatcttccgt
tgcgaggatgaaagattcgagttggatggaattcttgaggtgaatttgtcgacgatacgc
gtccttgaggcggtgcagaagaaactgaatcatatgacatcggaagagcagcagaagttc
cggctggatagctcacttggtggaatgtccgaagtgattcataaaaaggcaattcaaagg
atatatggcgataaagccccggatattattgatggcttgaagaagacacctgctgttgct
gttccgctggtgttgaagaggttgaagatcaaggaggaggaatggagggcagctcagcgt
ctctacaataaaacatggagagatcaaaatgaaaagtattatttgaagtcgctggactac
caaggaatgacgttcaagcaaaatgacctcaaagcgatgcggtccaagagtttggtgaca
gaaattgaaaatatatatgacgagaaacaagagcaagcggcagaaggcaatgctgatctc
agtggaccacacatgatctttacatacaaggataaatctattcttgacgatgctgctggt
ctaattgtgcaccacatgaaacgccagaccggaatacacaaagaagacaagtcaaagatc
aaatctttgctcagcatttttgttccagatttattctttgcaccaagaggtgaattgagt
gatgacgaagactctgttaaagacagcaatggcaatggaagagctgagctttccaacgga
ctgcccgaggctgagtcggatgatgcgtataacctgtattttgtgaacaacaactggtat
atctttctaagacttcatcagatgttatgcgaacggttgttgaaaatgtaccagcggtct
gtcgagatcgccgagggtgaagcttccgataagaagcaaagaaaagaatcaaccgctgtc
gcgttacgtctgaaggctccaacggatattgacgttgaagaatactacccagcattcctt
gatatggtgcgaaatcttttagacggcaatatggaaatgagcagttttgaggatacgtgc
agagaaatgtttggtgtacatgcttacatcgtcttcaccattgataagctagtacagaat
atcgtacgacagcttcagaccattgttgttgaagagacttgtgttcaagtcaaggaactt
tatcagcaagagcaaacacgcgaaggggctgggggaaactctgctacccaggttcttcgc
caagaagaggagatgtcgtatcaaaagaaagctgaaacgttgttgaacgacgagtgttgt
tataagtttatcgtgcacaaagacaagacaattatcacgattagtattgagttgattgag
acggaagacacccattctgaagatatgttggtgatcgggaagtggaatgattacgtggac
aaatatgtcattaatcaagagataccaccggaggtcacggaacggttgaaagtaaaacca
atatttttgccaagaactgcgaagcataaacgctcaaagacagcgacagatggtgaacga
actggcgtagaaagtgatgaacgtggatgcagtccatcggctggcgagggcgaggagatg
cctcctgatatcgtaaacgaagatggtatggaatgcaagatctcttctaattcctataaa
ctagagtttgtcgcaggtggactgaatttcttctacaggaaaaagtcgttgccaagagca
agacagaactacccgaaggtcactcgaaagttaacggagaatttccaacgatggctcgaa
agttgggcgatggataacgtatcacgtgagcaaaaaagcacgtgtgaccagtggttggtt
gggcactccgagggtctgcaacagtgtaccacgaccaagacaaatgtgcgggacaatttt
aagagctacacaaaatatcttgttgaatggccagctccgcctgttccttcgtctaattct
actcaagctcagtaa
DBGET
integrated database retrieval system
