Dendronephthya gigantea (soft corals): 114525755
Help
Entry
114525755 CDS
T06112
Name
(RefSeq) ubiquitin conjugation factor E4 A-like isoform X1
KO
K10596
ubiquitin conjugation factor E4 A [EC:
2.3.2.27
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114525755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dgt04121
]
114525755
Enzymes [BR:
dgt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114525755
Ubiquitin system [BR:
dgt04121
]
Ubiquitin ligases (E3)
U-box type E3
114525755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
114525755
NCBI-ProteinID:
XP_028402975
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MNDEDGIRDDLKGNPFVALFPSMSQAMQYATQLNSIDMTQETLRGSQDGSKDDTGMEQEK
DDNDEEAFDTKRIVNNLLQRIFLVSFQEYQEEDGLDREFGGIPTSYVYLPATESDPESQF
LNWVDMDEVLLKRLMMEKPGDNVLEAVGCKDTPKFLLDSNPAEKRMIHYLLGCYHRKLQE
DKKWKDKYDLLAYYLKQCEELIVSYTRMCLSQPELFPNKNPHHDFSELLLTMSQDEEFKG
LWNLVLKDPLSSDEMVVMFSPVVNRVSEKIKTTEMVLMQPDAAPILNVLHMFSQNKDIAQ
VLVKSSLWLPSSPVTIGAFSGLYGLPVMGASYEQTTILGRFLGLSSVSRNPQNSEGFFLK
PSRQSQSEMEAITASLRQYIKFNCDQMTQICKNLLKMSPATKHALLHWIASCLHSNDNRR
KMSSNQATLASNGFFLNLGNILLALCQPFLDPHSSKLTKIDPRYCIAMVTVDTMAQEETT
VHLRGLQAETKLCVRESEVEVDSQTSPAFGFTTELFFITHRCLQLGLQVTCDYYEKLMKE
LNKIQDVYNASRRQVVDHDITERIREEFEKGIATQLSLKCHLLMPSLVETALKFYIATAS
WLVQILIAQEDLDNMSIGNPSLATQHETAVGFQYIPEFVVENMVDFIIFLRHFNEATLET
GGEDLKYLLDFCAIFISKPRAIKNPHLRAKITDALEALLPVRKQELASMDGNIIATHYRQ
QVFQTSELAANHLGPALLSIFCDIEKGDYFEQKFGYRHHMYSVLEFIWDIPQYKKSIVDF
SKEADEIDHDSSGEPPIFLRFINLLVNDATFLLDEALSYLSAVKTLQDERDKGDWEKLES
PNAKKEKERELESSKAMARWHNILANETVKTLSYLTVEIKSPFRSSAMVARIAGMLNYFL
VRLVAKNQMKAFKVKNFDELHFKPQQLVFDIASIYLNLAKGDVDEVFCKAVGADDRSYSK
SLFHEAERVLRQIRTDVKIIENWHSLGEKIHGLVEAQQEIDDYLPEAPEEFLDAIMFSMM
TDPVRLPSGNIVDKAVIMRHILSDPMDPFNRAPLTVDMLEPVPELKERIQQWLQETKRKK
GKHDNEDT
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgaagatggaataagagatgacttgaaagggaacccttttgtggctctcttt
ccttccatgtctcaagcaatgcaatatgccacacaacttaacagtattgacatgacacaa
gagacattgagaggttctcaggatggaagcaaagatgatacagggatggaacaggagaaa
gatgataatgatgaagaggcatttgatacaaaaagaattgttaataatttgttgcagaga
atatttttagtatcttttcaagaatatcaggaagaggatggtttggatagagaatttggt
ggaataccgacctcatatgtgtacctcccggccacagaatcagaccctgaaagtcaattt
cttaactgggttgatatggatgaggttcttctgaaaaggttaatgatggagaaaccaggc
gataatgttctggaagctgtcggctgcaaagacactccaaaatttttgttggattccaac
ccagcggagaagagaatgatccattacttgctgggatgttaccacaggaagttacaagaa
gataagaaatggaaggataaatacgatctgcttgcctattacctaaagcaatgtgaagaa
ctgatcgtctcttacacgcgaatgtgtctttcgcaaccggagctttttcctaacaagaac
cctcatcatgacttttctgagttactcttaaccatgtcccaagatgaggaattcaagggg
ttgtggaatcttgtcttgaaagatccactgtcaagcgatgaaatggtcgttatgttctcg
cctgttgtcaaccgtgtgtctgagaagatcaagacaactgaaatggttttgatgcaacct
gacgccgctccaatattgaacgttcttcatatgttttcacagaataaagacatagcacag
gttcttgtgaagtcttcattatggctgccatccagtccagtcacgattggagccttttct
gggttgtatggtctcccagtcatgggagcaagctatgagcaaaccaccatcttggggcgg
tttttaggcctttctagtgtttctaggaacccacagaactcagagggattcttcctgaag
ccgtcaagacaaagtcagagtgaaatggaagccattactgctagtctacgacagtatatt
aagttcaattgtgatcaaatgactcagatttgcaagaatttacttaaaatgtcaccggcc
acaaaacatgcccttcttcattggatcgcctcttgtttgcattcaaatgataatagaagg
aagatgagcagtaatcaagcaaccttggctagtaatggattctttttaaacttgggtaac
atcctccttgcactctgtcaaccatttctggatccacactcttcgaaactaacaaaaatt
gatccacgttattgtatcgctatggtaacggtggacacgatggcgcaagaggaaaccacg
gttcatttgcgtggattacaagctgagaccaaactctgtgttcgtgaatctgaagtagag
gttgattcacaaacgagtccagcatttggtttcacaactgaattatttttcatcacgcat
cgctgtcttcaattgggtttacaagtgacttgtgattactatgagaaactcatgaaagaa
ttaaataagattcaagatgtttacaatgcatcacgtcgtcaggtcgtagaccacgatatt
acggagagaattcgagaggagtttgaaaaaggaattgcaacgcagctttctttgaagtgt
catctacttatgccctctttggtcgaaacagctctaaagttttatattgcaacggcttct
tggttagtccagattcttatagctcaggaggatcttgataacatgtctattggtaatccc
tcgttagccacgcaacacgagactgccgtaggttttcaatatattccagaatttgttgtg
gagaatatggtcgattttattatatttttacgtcattttaacgaagctactttggaaaca
ggcggtgaagatttaaagtatttgcttgatttctgtgctatttttatcagcaaaccccgt
gctatcaagaatccacatttgagagcgaagataacagacgcactggaagccttactaccg
gttagaaagcaagaattagcgtcgatggatggaaatattatagccacgcattacagacaa
caagtgtttcagacaagtgaactagcagctaaccatcttggtcctgctttactctcgata
ttctgtgatattgagaaaggggattattttgaacagaaatttggttatcgccatcatatg
tactccgtgttggaatttatctgggatattcctcagtacaaaaaaagcattgtggatttc
agcaaagaggcggatgaaattgatcatgatagttcaggcgagccgccaatatttcttcgt
ttcatcaatcttcttgtcaacgatgcgactttcttgctagacgaagctttgtcgtatctc
agtgcagtcaagacactacaagacgaacgcgacaaaggagattgggaaaaactcgaatca
cccaatgccaaaaaggaaaaggaacgtgagcttgaaagctctaaagcaatggctcgttgg
cacaatattttagccaacgaaactgtaaaaaccctctcctatctcacggtggaaatcaaa
agcccattccgaagctccgccatggttgcaagaattgctggaatgttaaattattttctt
gtacgtctggtcgctaagaaccaaatgaaagcattcaaggttaaaaatttcgacgaactt
cacttcaaaccacaacagcttgtgtttgacatcgcgtcaatctacttgaaccttgccaag
ggtgatgtggatgaagtattttgcaaagcagtcggtgcagatgatcgctcttattcgaaa
tctctgtttcacgaggctgaacgagtgttaagacaaatccggacagacgttaaaataatt
gagaactggcattctcttggtgaaaaaatacacggcctagtggaagcacagcaagaaatt
gatgattatcttccggaggcaccagaagaattcttggatgcgatcatgttctccatgatg
acagatcccgtgaggttaccctctgggaatatcgtggacaaagctgtcattatgagacat
attctcagtgacccaatggatccattcaacagagcccctttaacagtggatatgctcgaa
ccagttcccgaactgaaagaaaggattcaacaatggctgcaggaaacaaagaggaaaaaa
ggcaagcatgataacgaggacacgtag
DBGET
integrated database retrieval system
