Dendronephthya gigantea (soft corals): 114525778
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Entry
114525778 CDS
T06112
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114525778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgt03021
]
114525778
03036 Chromosome and associated proteins [BR:
dgt03036
]
114525778
Transcription machinery [BR:
dgt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114525778
Coactivators
SAGA/TFTC/STAGA complex
114525778
Chromosome and associated proteins [BR:
dgt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
114525778
STAGA complex
114525778
TFTC complex
114525778
SAGA complex
114525778
SLIK complex
114525778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_SPT8
WD40_RFWD3
WD_LRWD1
Beta-prop_WDR19_1st
Tricorn_2nd
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_Nup120_160
PROPPIN
LisH_PAC1
Beta-prop_DCAF12
Cytochrom_D1
LisH
Motif
Other DBs
NCBI-GeneID:
114525778
NCBI-ProteinID:
XP_028403002
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MAANSGANMQQKEQSDADKQTLLAVLQYLKKQNLKGTEEALRREVSCAGIEESSVAGKDI
SSALSEYSSEGDPTKYEVYYASIQEYIEKSLDVYKPELGTILYPLFVHMYLDLIYQGHEE
KAKSFITKFRDSQEDYYQEDIMKLSSVTHKEHVEVNDLMLTLRSNKFVIKLSRESYQALK
KKLQESQNNLVLNLIQQHLQFDVFDGRPRSKDAVSSAAGAIVGEPTNEANKGKVLHGIAQ
EPDLGVVLPEDDPENEDQEKDKPKKKKTKKEGGQGKKKKEFNPDAPKLDRIPFPDLKDRE
KVLKATMLKETAKMLNVDSETLPSVCLYTFLNAHQGLNTITFSDDSNLICGGFENSSLRI
WTLTPRKLRALKPAVELARIDKDAEDVFERILDDKTAAESKTLIGHSGPIYGASFNYDNS
LLLTSSEDKTVRLWSLFTYTNIVCYKGHNYPVWDVQFSPKGLYFASCSHDRTARLWTTEN
PHPLRIFAGHYSDVNTLRFHPNCNYIATGSCDRTVRLWDITSGQCVRVLTGHKGAIHSLD
FSPDGRYLASSGVDKKIILWDIPEARPTAEFNGHTDTVHSLRFSRDGHILASGGSDCCVK
LWSAQNACNKDDEDDLMLGMDNSGCTVQMTELASFPTKVTPVHCLHFTWRNLLLSAGPFD
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaattctggtgcaaacatgcaacaaaaggaacagtcagatgctgataaacaa
accttacttgcagttttacagtatttgaaaaagcagaatttgaagggcacagaagaagct
ttaagacgtgaagtgtcgtgtgcaggtattgaagagagcagtgttgctggaaaagatatc
agtagtgcattgtcagaatacagcagtgaaggagatcctacaaagtatgaagtatattat
gctagcatccaggagtacattgaaaagtcactcgatgtttacaagcctgaacttggcaca
atcttgtatccattatttgttcatatgtatctggacttaatttaccaaggtcatgaggag
aaagctaaatcgtttataacaaagtttcgtgatagccaggaggattactaccaggaagat
attatgaaactctcatcagtcactcacaaagagcatgttgaagtaaatgacttgatgctt
acgcttaggagtaataaatttgtgatcaagttgtctcgagagtcgtatcaggccttgaaa
aagaagctccaggaaagtcaaaataatcttgttttaaatttgatccaacaacatctccag
tttgatgtcttcgatggtcgtccacgcagtaaagatgcagtgtcctctgcagcgggtgcc
attgttggagagccaacaaatgaagcaaataaagggaaagtgttacatggtattgcacaa
gagccagaccttggtgtggtcttgccagaagatgatcccgagaatgaagatcaagagaaa
gacaaaccgaagaaaaagaaaacaaagaaagagggaggtcaaggaaaaaagaagaaagag
tttaaccctgatgcaccgaaacttgacagaattcctttcccagatttaaaagatcgtgag
aaagttctaaaagccacaatgctcaaagagactgcgaagatgttgaatgttgatagtgaa
acattgccgtcagtttgtttgtacacctttttgaatgcccatcaagggctgaacacaata
acattttccgatgactccaatcttatttgcggcggttttgaaaacagttcacttcgcatt
tggacgctcacgccgaggaaattacgtgctttgaaaccagctgtcgaattggcaaggata
gataaagatgcagaggatgtgtttgaacgaatactggatgataaaactgcagcagagtcg
aagacactcataggtcatagcggaccgatttatggcgcaagtttcaactatgataattca
ctacttctcacatcgtccgaggataaaaccgtcagattatggagtttattcacatatacg
aatattgtgtgttataagggccataactatcctgtgtgggatgttcagtttagtcctaaa
ggactctacttcgcatcttgttctcacgatcgaactgcgagattatggacaacagagaac
cctcatccactgcgaatatttgctggacattactctgacgttaatacattacgctttcat
ccgaactgtaattacatcgctactgggtcatgcgaccggacagtgagattgtgggatatt
acctctggtcaatgtgttcgtgtgctcactggacacaagggtgcgattcactcgttagat
ttcagtccggatggtcgttatttagcctcttcaggtgttgataagaaaattatcctgtgg
gatattcccgaagctcgtcctactgcagaatttaatggtcacacagacaccgtgcactcg
ctgaggttcagcagagatggtcatattttagcatcgggcggttcagactgctgtgtgaag
ctatggagtgctcagaatgcttgcaataaagatgacgaggacgatttaatgttagggatg
gataactcgggctgtacagtacaaatgacggaattagcttcgtttccaacaaaagttacc
ccagtacactgtctgcattttacttggaggaatttgctgttgtctgctggtccgtttgat
cgatag
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integrated database retrieval system
