Dendronephthya gigantea (soft corals): 114526258
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Entry
114526258 CDS
T06112
Name
(RefSeq) ATP-dependent RNA helicase DDX4-like isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dgt03036
]
114526258
Enzymes [BR:
dgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114526258
Chromosome and associated proteins [BR:
dgt03036
]
Eukaryotic type
Gene silencing
piRNA pathway
114526258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
zf-CCHC
Helicase_C
zf-CCHC_2
RRM_1
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
114526258
NCBI-ProteinID:
XP_028403598
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MSWPHGLTQNARGQAVSQTKGDGNNGDRFPLYVTNIPVDINEDQLKEMFNQAGDVIHSKC
LPPREGRNSKVGFITYANEEEAEKGISMFNETRISGQTLRVDYTKSFKETRAQYGKGNSP
FSGNKTNDAPFPSGNTKSGSPFSSGSNDSPFSKSVNSDAMRGIKQRSLPPQPNGPQGIGR
GIHYDDDAPSQPGSVMNGQPEGMFNSSPGGMHDNFSANQNNYQQSNYQGNFQDDSPQGNF
NNQQGTQPYPPQSTLPNDQTSYQSDMKAMVNGFSSMQVTQPSDGIQPTDHDQNENTGQNG
PVDQSQAYDQNQNYDGNQAYGQNQTYGYDQNQGYDQNQAYDQNQPYDQNQAYDQNQAYDQ
NQAYDQNQGYDENQAYDQNQVYDQNQAYDQNQAYDQNQAYNQNQAYNQNQAYDQNQAYDQ
NQAYDQNQAYDQNQQAYPNQTYDENAANYHENQAYNQNQEYNQSQPYDENQTYDQTQQYN
QHQSFDQNQSDGQHQSYGQDPTYGQNQNYGENQAYDQNAYGQSQTYDQNEAHGQSQFQTP
AGGENQTYGENQGYNQNQSYAENHDTHTYGQNQNFGSQVTDQSQPETSTGDHTSQMYGQQ
QIFHNQQTFGDNQVSNKSETPDQKRSFDQMFGAQSTANDSLKQSFDQNQFQVSSRLPRSQ
NDSGGKTCHKCGEVGHFARECPNNSTGGGTSGNCHNCGQPGHFSRECPTKKTHGGECHRC
GESGHFARECPQSSGGGGGGTCHNCGEPGHFSRECPNKSANSGSDGCHRCGEQGHFAREC
PNNSDQGSTCPRPAMRVDYVPPPLPDDVDMLFKSAVPKGINFDRFDNIPVEVTGNSPPAA
IQTFDELLLPDTLKSNLAKAEFTKPTPVQKHGMPIILSGRDVMACAQTGSGKTVAFLLPV
MAGMVNNRLAEAGYLGGGDAPSPAALCVAPTRELASQIFTEALKFSNGTYLRPVVCYGGV
SVAHQLSKLERGCHILIGTPGRLIDFAGRNKVSFRNVRYLILDEADRMLDMGFENDMRKI
VTQFGMPEKTQRQTLMFSATFPDQIQQLAREFLNDYLFLAVGSVGGSNLDIKQEILDVQG
NQKRSVLMEILGQSGTEKTLVFVERKRNADFLANWLSQNQYPATSISGDRTQQEREAALC
DFRGGRAPVLIATSVAARGLDIPNVKHVINYDLPQQIEEYVHRIGRTGRIGNQGRASAFF
ERGKDDKLARSLVKVLSDALQDIPNWLEEVAERALGTNYGPAGGKFASRDTRQFDRRYAS
GGGVGGNSEPRRTTNVSFVNSSSNSRQNEEDEEEWA
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgagctggccacatggtttaacgcaaaacgctagaggtcaagctgtgtcgcaaactaaa
ggcgatggcaataatggagatcgatttcctttgtatgttaccaacattccagttgacata
aatgaggatcaattaaaggagatgttcaatcaagcaggtgatgtgatccattcaaaatgc
cttcctcccagagaaggtaggaattccaaggttgggtttataacctatgctaatgaggaa
gaggcagaaaagggcatttccatgttcaatgaaactcgtataagtggacagactctcaga
gtggattatacaaaatcattcaaagaaacgagggctcagtatggaaagggaaattcacca
ttctctggtaacaaaacaaatgatgcaccattcccatctggaaacacaaaaagtggttct
cccttctcctcaggcagcaatgattcaccattctcaaaaagtgtgaattctgatgcaatg
agaggcattaaacagcgtagcttgccaccacaaccaaatggcccacaaggtattggtaga
ggaattcattatgacgatgatgctccaagtcaacctgggtcagtcatgaatgggcaacct
gagggcatgtttaattcttcccctgggggcatgcatgataatttttcagctaaccagaac
aattaccagcaatcaaattaccaaggtaacttccaagatgattcaccacaaggaaatttt
aataatcaacaagggacacagccttatcctccacaatccacacttcctaatgatcagacg
tcgtaccagtcggacatgaaagccatggtaaatggttttagttcaatgcaagtcacacaa
ccttctgatggaattcaacccactgatcatgatcaaaatgagaacacaggtcaaaatggt
ccagtggatcaaagtcaggcttatgatcagaatcagaactatgatgggaatcaggcatat
ggtcaaaatcaaacatatggttacgatcagaatcagggatatgatcagaatcaggcatac
gatcagaatcagccatacgatcagaatcaggcttacgaccagaatcaggcatacgatcag
aatcaggcatacgaccagaatcagggatacgatgagaatcaggcttatgatcaaaatcag
gtttatgatcaaaatcaggcatacgatcagaatcaggcatacgatcagaatcaggcatac
aaccagaatcaggcatacaatcaaaatcaggcttacgatcaaaatcaggcatacgatcag
aatcaggcatacgaccagaatcaggcttacgatcaaaatcagcaagcatatccgaaccag
acatatgatgaaaatgctgctaactatcacgagaatcaagcatataatcaaaatcaggaa
tataatcagagtcaaccatatgatgagaaccaaacgtatgatcaaacgcagcaatataat
caacatcagagctttgatcaaaatcaaagtgatggtcaacatcaaagctatggtcaagat
ccaacatatggtcagaatcaaaattatggtgaaaaccaggcgtatgaccaaaatgcatat
ggtcaaagtcagacttacgatcagaatgaagcgcatggtcaaagtcagttccagactcca
gccggtggggaaaatcagacatatggggagaaccagggctacaatcagaatcagagctat
gctgaaaatcatgatactcatacatacggtcaaaatcaaaatttcgggagtcaagtcacc
gatcaatcccagcctgaaacgtcaactggtgaccacactagccagatgtatggtcaacaa
cagatattccacaaccagcagacgtttggtgataatcaagtgtctaacaaaagcgaaacg
ccggatcagaaacggtcttttgatcaaatgtttggggcgcaatcaactgcgaacgattca
ctaaaacagtcattcgatcaaaatcaatttcaggtttccagtcgtttaccaagatcccag
aatgactctggtggaaagacatgccataaatgtggagaggttggtcacttcgctcgtgaa
tgtccgaataattcaacgggcggtggcaccagcggtaattgtcacaattgtggtcaacct
ggtcatttctctcgtgagtgcccaaccaagaaaacccatggcggtgaatgtcatcgctgt
ggcgagagcgggcattttgccagggaatgtcctcagagctctggcggtgggggtggcggt
acctgtcacaattgtggggaacccggacatttttcccgggagtgtcctaataagtctgcc
aacagtgggagtgacggctgtcacaggtgtggagagcaaggtcactttgcgagagaatgt
cccaataatagtgatcaaggtagtacttgtcccaggccagcgatgagggtagattatgtt
cctccaccactaccagatgacgtggacatgttattcaaatctgctgtccccaaaggaatc
aattttgataggttcgataacattcccgtggaggtcacaggcaacagtccaccagcagca
atacaaacatttgatgagttattattacctgacactttgaaatccaatctcgcgaaagcg
gagttcactaaacccactccagtgcagaaacatggcatgcccattattctaagcggacgc
gatgttatggcctgtgcccaaactggttccggaaaaacggtggcattcctgttaccagtg
atggcgggcatggtgaacaatcgcttagcagaagccggctatctgggcggtggggatgcg
ccgagtcctgctgcattgtgtgtggctcctacacgcgaactggcttctcaaatattcact
gaggctctgaagttctccaatggtacatatctacgtcctgttgtgtgttacggtggtgtg
agtgtggcacatcaattgtcgaagctggaacgtggttgtcatattcttattggaacacct
ggtcgtttaatcgacttcgctggacgaaataaagtaagcttcagaaatgttcgttatctc
atcctggatgaagcggaccgtatgcttgacatgggatttgaaaatgacatgagaaagatt
gtaactcagtttggcatgccagaaaagacccaacggcaaactttgatgttcagtgccaca
tttccagatcaaatccaacaactggcccgagagtttctgaatgattacctgtttctggct
gtcggaagtgtcggtggtagtaacctcgatatcaaacaggaaattctcgacgtgcaggga
aatcagaagagatctgttttaatggaaatccttggacaatcagggacggagaaaactctt
gtttttgttgaaagaaaaagaaatgctgattttcttgccaattggttatctcagaatcaa
tatccagcaactagtattagcggggaccgtacccagcaagaacgtgaggcagccctttgc
gatttccgtggtggacgtgcgcctgttctcattgcaacatcggttgctgcacgtggtttg
gacataccaaatgtaaaacacgtcatcaactatgacttgccgcaacagatcgaagagtat
gtacatcgtattggcagaactggtaggattggaaatcaaggcagggcttcggcattcttt
gagcgtggaaaggatgacaagttagcaagaagtttagtcaaagttttatctgatgccttg
caagacataccaaattggcttgaagaagttgcagagcgggcattaggaacaaactacgga
cccgctggagggaaattcgcttctcgcgatacaagacagtttgaccggcgatatgccagt
ggtggaggtgttggtggaaactcagaacctcgtcgcacaactaatgtctcctttgtaaat
tcgtcctccaattcacgacaaaatgaagaggatgaggaggaatgggcatga
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