Dendronephthya gigantea (soft corals): 114526273
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Entry
114526273 CDS
T06112
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114526273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgt03021
]
114526273
Enzymes [BR:
dgt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114526273
Transcription machinery [BR:
dgt03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
114526273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
114526273
NCBI-ProteinID:
XP_028403626
LinkDB
All DBs
Position
Unknown
AA seq
1774 aa
AA seq
DB search
MFSSFSGPTGHLSGVRFSLYSEEEIRKLSVKCVTNPQTFDHFSNPTYGGLYDPAFGPTDR
DDLCSTCGQNNMYCPGHFGHIELKLPVYHPLFLKLLVTILRSTCFQCHKMNVEKGTKCLF
QCQMKALDYGLLADTLDLETIANSAAVDVKGSSIILQDVVTNAVQKYLKESLKQIDDKKK
VKKSCSGKNVTELRNKIIKEFLRDKLSYKAKKCIHCGSPRRNVRIEYNSKIYLKALSSRQ
ASNWESVSRLSKSNPNTSAMPNEDLSNVGLEEEECSDDELTDKRPLPSQTQSSTAEVERT
DIVKSVQQTYITPLEVQEHLHRVWEKEETLLDSLLGSYPSPTASKRKSSPQMFFLNVLPV
PPSRFRPISVMGDKKFDNPQSANLTKVLEDCQVLKVCLDQIKQTRSNNDGEGTSDVASRS
SSSTATTTSSTYDRIPGKSPEEKLQNTWVRLQNDVNCFIDSDLDKLSTNQANGIKQLLEK
KEGLFRKHMMGKRVNFAARSVISPDPYINTDQIGVPEVFAKKLTYPQPVTPWNVKELRQA
VINGPNVHPGANLVENEDGKKILLNATDPNQRQAIAKRLLTPSHSSLPLSQNKKVYRHLK
DGDVLLLNRQPTLHKPSIMAHKARVLPGEKTIRLHYANCKAYNADFDGDEMNAHFPQNEL
ARSEAYSIASTNFQYLIPKDGNPVSGLIQDHMVSGVSLTMRDRFFNKLDYQQLVFCALAT
ITNRRFELLKPTILKPQELWTGKQVISTILINVIPAKCKRLNLHGKSKIAGKSWVTGTPR
RSLANGMEIKANEMCESQVIIRDGELLCGVLDKAHYGSTPFSLVHCCYELYGGVVSSLLL
SALARVFTSFLQMRGFTLGVEDIIVRKKPDERRRKIMKKGRRCGHEVATEALGLPEDTEN
EVLMERFQAAHHSRDDNDMKELDLKMKGKTDQVQDQINKQCIPSGLLKNFPQNNLQLMVQ
SGAKGSVVNCMQISCLLGQIELEGRRPPLMISGRSLPSFLPYDPSPRAGGFVDGRFLTGI
RPQEYFFHCMAGREGLVDTAVKTSRSGYLQRCLIKHLEGLHVGYDLTVRDSDGSVVQFCY
GEDGLDVLKTACLSQKQFPFMASNYKALITQLKPGAAVAQLDSSSAGKAQRKLDRWIRKN
KQSPSEKRTRISSLSSLVKETTPDESSNSSKERNIWTVNKSFIDAWRSASPHLRERYARR
RAPDPVLSKMSPACHVGAVSEKFHSSLMKYITTNPDNCLTDQPEEFATKLSAEKFQILMH
LKALRSLAEPGEGVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRMREILMTASA
NIKTPTMEVPLRSGKKALKQAKKLKSKFAKVTLSQVLKHVEVCETLSSKQAGTRSRMYRI
RFQFLPHDAYQGELFVTPESILIYMETIFFKKLTSAIARVIRAAQRASLLDTTHERISGQ
NESSEGAVNEKEDSLNSSSKYDEDDDNADLSEEEADADGDATGERNKKKREQHASYEAPD
QDEEQINKNLIESEESDSDDEANTPSKLQENYFPDEDKADMAMEVASQSKETNPAHDKRI
TNVMLNNPNVASYCFDEGDQEWCEVKLRFPVTGSKVMLTTLMEKLATQSVIYETPGITRS
FLVENKDKPSMFKTEGVNLKVMWNHPEVFEIEKLYTNDTHQVANTYGIEATGRVIATEIK
NVFGAYGIEVDPRHLTLVADYMTFEGSIKAFNRIGIESNASPFQKMSFETTMHFLRGATI
SGDTEQLSSPSSRLVVGRVVGGGTGCFDLKIPLC
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgttttcttccttttctggtcctacgggccatttgagtggtgtgagattttctttgtat
tcagaagaggaaatcagaaagctgagtgtgaaatgtgtgactaatcctcagacgtttgat
cacttttccaaccctacatatggaggtctctatgatcctgcatttggtccaacggacagg
gatgatttatgtagtacatgtggtcaaaataacatgtattgtcctgggcattttggtcat
attgagttaaaactccccgtttaccatcctttgtttctcaaattgttggttacaatattg
agatccacatgttttcagtgtcacaaaatgaatgtggagaaaggaaccaaatgcctcttc
caatgtcaaatgaaagcccttgattatggattgttagcagacacattggatcttgagaca
attgccaactcagctgcagtggatgtaaaagggagcagtatcatacttcaagatgttgtt
actaatgctgtacaaaagtatttaaaggaaagcctaaaacaaattgatgataaaaaaaag
gttaaaaaatcatgcagtggaaagaatgtcacagaactgcgaaacaagataatcaaggaa
ttcttgagggataaattatcttacaaagcaaaaaagtgcattcattgtggctcaccacga
agaaatgttaggattgaatacaactctaaaatatacttaaaggctttaagttcaaggcaa
gcaagcaattgggaatctgtttcaagactttcaaaatcaaatccaaatactagtgctatg
ccaaatgaagatttaagcaatgttggtttggaggaagaagaatgttctgatgatgagctc
actgataaaaggccacttccatcacaaactcaaagttctacagctgaagttgaaagaaca
gatattgtaaagagtgtgcagcaaacctacattaccccactagaagtacaggaacatctt
catcgagtgtgggaaaaagaagaaactctcttggattcattacttggatcatatccatca
ccaacagcaagcaaaagaaaatcatcgcctcagatgtttttccttaatgttcttcctgtt
cccccctcacgatttagaccaatttctgtgatgggcgacaaaaagtttgacaatccccag
tcagctaacctcactaaagttcttgaagactgtcaggtgttaaaagtttgcttggatcaa
ataaaacaaacaagatctaacaatgatggcgaaggaacaagtgatgttgccagcagatcc
tcatctagcactgcaacaactacatcgagcacctatgatagaattccgggtaagagccct
gaggaaaaacttcagaatacttgggttcgacttcaaaacgatgtcaactgctttattgac
agtgatctggataaattatcaacgaatcaagccaacgggataaaacagttacttgagaag
aaagaaggtctgtttcgaaagcacatgatgggcaaacgtgtcaattttgctgcacgttca
gtcatttcgcctgatccatatattaacactgatcaaatcggagttcctgaggtgtttgcg
aagaaacttacatatcctcaaccagtgacaccgtggaatgttaaagaactccgacaagca
gtcattaatggtcccaacgtacacccgggagcaaatttggttgagaacgaggacggcaaa
aagattctgttgaatgccacggatcctaaccagagacaagcaatcgcaaagagattattg
acgccgtcgcattcatcactgcccctcagtcaaaacaagaaggtctaccggcatttaaaa
gacggggatgtattgttgctcaatcgtcaaccaactcttcataaaccgagtattatggct
cataaggcacgtgttttaccaggtgaaaaaacaattcgtctgcactatgcaaactgcaaa
gcgtacaacgctgattttgatggcgatgaaatgaatgcgcattttcctcagaacgaactg
gcgagatcggaggcctatagtattgccagcacaaatttccagtacctcattcctaaagat
ggcaatcctgtcagcggtttaattcaagatcacatggtttctggcgtttctttaactatg
cgagatcgtttctttaacaaattggattatcagcaacttgtattctgtgctcttgcgact
attaccaatcggcgcttcgagctgttaaaaccgactattttaaaaccacaggaactgtgg
actggaaaacaggttatctcaacgatattgattaatgttattcctgcgaagtgcaaaagg
cttaacttgcatggaaaatcaaagatcgctggcaaaagttgggtaacaggaacgcctcga
cgtagcttggccaatggaatggagattaaagcaaatgaaatgtgtgaatcccaggtgatt
attcgtgatggtgaactgctctgtggtgttcttgacaaagcacattatggatcaactcca
tttagcttggtgcattgttgttatgagctttatggcggagtggtgtccagtctcttgctg
tccgctctggctcgtgtattcacatctttcctacaaatgcgtggtttcactctgggtgta
gaagacattatagtcaggaaaaaacccgatgaaagaagaaggaagattatgaagaaaggc
cgtcgttgtggacacgaagtagcgactgaagctctgggtcttcctgaagacacggaaaat
gaagtattaatggaacgatttcaagctgctcaccacagcagagatgataacgacatgaaa
gagctggacttaaaaatgaaaggaaaaacagatcaggttcaggatcagattaacaaacaa
tgcattccttcaggcttactgaagaatttcccgcagaacaaccttcagcttatggtccaa
tctggtgcgaaaggatcggtagtcaactgcatgcaaatatcgtgtttgcttgggcagatt
gagctggaaggtcgccgtccgccattaatgataagtggtcgttccctgccttcatttctt
ccttatgatcccagcccgcgtgcgggtggttttgtggacggacgttttttaactggcata
agacctcaagagtatttctttcattgtatggctggacgagagggtttggttgataccgct
gtgaagacaagtcgcagtggctaccttcaacgatgtcttatcaagcatttggaagggttg
catgttggatatgacttgacagtaagggacagtgacggatctgttgtacagttttgctac
ggggaggatggcttagatgtcttgaaaactgcttgtttatctcagaagcagtttccgttc
atggccagtaattataaggccttgattacacagttgaaacctggggcagccgttgctcaa
ctagactcttcttcagcaggaaaagcccagcgaaagcttgatcgttggatcagaaaaaat
aagcaatcaccaagtgaaaaacggacaagaatctcctccctgagttctcttgttaaagag
acgactcctgatgaatcatcgaacagttctaaagagcgaaacatatggacagtgaataaa
agtttcattgatgcctggcgttcagcctctccccatctaagagagagatacgcgcggcgg
cgtgcaccagatccagtcctttctaaaatgtctccagcttgtcacgtgggtgcggtttca
gagaagtttcactccagtcttatgaagtacatcacaactaacccagataattgtctaact
gatcaacccgaagaatttgcaacaaaattgtctgctgaaaaatttcaaattttaatgcat
ttgaaagctcttcgctcattggctgaacctggagagggcgtcggtttattggctgcccaa
tctattggcgaaccgtcgacacaaatgacattgaatacctttcattttgccggtcgtggt
gaaatgaacgttactctaggtatcccaagaatgagagaaatcttgatgactgcgagtgct
aatataaagacgcccaccatggaagttccactgaggtcgggaaagaaagctttgaaacaa
gcaaagaaattgaagtccaagtttgcaaaagtcactttatcacaggtgttaaaacatgtt
gaagtgtgtgaaacgctttcgtctaagcaagctgggacgagatcccgtatgtatcgcata
cgattccagtttttaccacatgacgcgtaccagggagaactatttgtcacgcctgaatcc
attttgatttacatggaaacgatatttttcaagaagttaacctcggcaatcgcgcgcgtt
atcagagctgctcaaagagcaagtttgctcgataccactcatgaaagaatatcagggcaa
aacgagtcaagtgaaggtgccgttaacgaaaaagaagactcgttgaattcgagcagtaaa
tacgacgaagacgatgataatgctgacctatcagaagaagaggcagacgctgatggtgat
gcaactggagagagaaataaaaagaagagagaacaacatgccagttacgaagcacctgat
caagacgaggaacaaatcaacaaaaatctaatagaaagtgaagaaagtgactcggacgat
gaagcgaatacacccagcaaattacaagagaattattttccagatgaagacaaggcggat
atggcaatggaggtcgcgtcacaatcaaaagaaacaaacccagctcatgacaaaaggatt
actaacgtaatgctgaacaatccaaatgttgcgtcgtattgctttgacgagggagatcaa
gaatggtgtgaagtgaaattaaggtttccagtcaccggcagtaaggtgatgctcacaaca
cttatggaaaaattggcgacacagagtgttatttacgaaaccccgggaataacacggtct
ttcctggtggaaaacaaagacaaaccatctatgtttaagacagagggagtgaatttgaag
gtgatgtggaatcatcctgaagtatttgaaatagagaagttgtataccaatgatactcac
caggttgctaatacatacggtattgaagctaccggtcgggtcattgccactgaaattaag
aacgtgtttggtgcgtatggtattgaggtggatccacgtcatttgactttggttgctgac
tacatgacgtttgagggctccatcaaggctttcaatcgcataggaattgaatcaaatgct
tcgccattccaaaagatgagttttgaaacgaccatgcacttcttgcgcggtgcaaccatc
tcaggagatacagaacaattatcttcgccttcctcacgacttgtcgttggccgtgtggtt
ggtgggggaactggatgctttgacttaaaaatacctctgtgttaa
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integrated database retrieval system
