Dendronephthya gigantea (soft corals): 114526433
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Entry
114526433 CDS
T06112
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB-like
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03022
Basal transcription factors
dgt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114526433
09124 Replication and repair
03420 Nucleotide excision repair
114526433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgt03021
]
114526433
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114526433
Enzymes [BR:
dgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
114526433
Transcription machinery [BR:
dgt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114526433
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114526433
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
114526433
NCBI-ProteinID:
XP_028403832
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MSARNKRSKKESSDSGNKSSKKAKASNETGNNGDAESENSINQSAPKSSAVTLTGKEAEE
DEYGGRDYRKVVQLKLDHDSRPLWVAPDGHIFLESFSPVYKHAHDFLIAISEPVCRPEHV
HEYRLTAYSLYAAVSVGLQTNDIIEYLRRLSKTSIPDGIIQFIKLCTLSYGKVKLVLKHN
RYFAESSFPEVLQRLLRDPDVQMCRKRNDTDVAENDTQLLSTTVSTKSVFQPHKVRPSSA
PTTEITNVEEEKDKTEVESSIPTDITDYIDKIDQDEDEEEAQSFSFEVAQEHIETLQRKC
IELDYPLLAEYDFKNDTINPDLNADLKPTTVLRPYQEKSLRKMFGNGRARSGVIVLPCGA
GKTLVGVTAACTVRKRCIVLCTSGVAVEQWRSQFKLWSTVEDRHIYCFTADSKSKPGGCS
IAISTYSMISHSGKRSWEAEQVMNFLQGQEWGLMLLDEVHTIPARQFRRVLTAIQAHCKL
GLTATLVREDDKIQDLNFLIGPKLYEANWMELQDNGFIARVQCAEVWCPMTPEFYREYLN
MRSRKRKLLYVMNPNKYRTCEFLVKYHERRNDKVIVFSDNVFALKSYAVKMNRPYIYGPT
SQGERMQILQNFQHNPLVNTIFISKVGDNSFDLPEANVLIQVSSHGGSRRQEAQRLGRIL
RAKKDMIAEEYNAFFYTLVSTDTQEMFYSGKRQRFLINQGYSFKVITKLAGMDEENLAYA
TKRDQQELLQKVLAASDADADEEGDAQSRSSSQNSSAVVRRTGSMASLSGADSMVYLEYR
KPNKDRHPLFKKLRK
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaagaaataaaaggtcaaaaaaagaatcgagtgatagtggcaacaaatcatca
aaaaaggctaaggcttcaaatgagacaggaaacaatggcgatgctgaatcagaaaattct
atcaatcaaagtgctcccaaatcttctgcagtaacactgacaggaaaagaagctgaggag
gatgaatatggcggtcgcgattaccgtaaagtggtccagttaaagttagatcatgattct
cgtcctttatgggtggccccagatggccatatctttttggagtcattttcacctgtttac
aaacatgctcacgacttcttaattgccatttccgagccagtatgtcgaccggaacatgtg
cacgagtacagattgactgcctattcattgtatgctgctgtttctgttggacttcagacc
aacgacataattgaatatctgcgaagattgagtaaaacatcaattccagatggtattatt
cagtttattaagctatgtaccttgagttatggcaaagtcaagttggttttgaaacacaat
cgatattttgccgagagttcatttccggaagtcttacagaggttacttcgggatcctgat
gtccaaatgtgcaggaaaagaaacgatactgatgtggctgaaaatgacacacaactcttg
tcaacaaccgtatcaacaaaatctgtatttcagccccataaggtcaggccatcatcagcg
ccaaccacagaaattactaacgttgaagaagaaaaggacaaaactgaggtcgagtcatcg
attccaaccgatatcacagattatatagataaaatagatcaagatgaagacgaggaggag
gcgcagtcattttcttttgaagttgcacaagaacatattgaaacgttgcaaagaaaatgt
attgagctggattatccattgttggctgaatatgatttcaagaacgatacaattaatcct
gacctaaatgctgatttgaaaccaacaacagttctacggccgtaccaggaaaagagtcta
agaaagatgtttggtaacggaagagcacgatcaggcgtaattgtattgccatgtggtgcc
ggcaagacactggtgggcgtaactgctgcttgtactgttagaaaacgttgcattgttctg
tgtacctctggtgttgctgtggagcagtggagaagtcagtttaaactgtggtcgacagtg
gaagatcgccatatttattgtttcactgctgattcgaaaagcaagcctggcggatgcagt
atcgctatctcgacgtattcaatgatttctcatagcggtaaaagatcctgggaagccgag
caggtcatgaattttcttcaaggtcaggaatggggtcttatgttgttggacgaggtgcac
acgatacctgcaaggcaatttcgaagagtactaactgccatccaagctcattgtaaactt
ggtttaactgcaaccttagttcgagaagatgataaaatccaggatttaaatttcttgatt
ggcccaaaactttacgaagctaattggatggaacttcaagacaatggatttatagcaaga
gttcaatgtgctgaggtgtggtgtccaatgactccagagttttacagggaatatttaaat
atgaggtctagaaagcgaaagttgttgtatgttatgaatcccaataaatatagaacatgc
gagttccttgtcaagtaccacgagagacgaaatgacaaagtgatcgtcttttctgacaac
gtgtttgccttgaagagttacgctgtcaaaatgaacagaccatatatttacggtccgacg
tcgcaaggagaaagaatgcaaattctgcaaaactttcaacataatccactagtcaacaca
atattcatatcaaaagttggagataattcttttgatttacccgaggctaacgttctaatt
caggtttcgtctcacggtggatctcgtagacaggaagcccaacgtttaggccgaatcctg
cgagcgaagaaagatatgattgctgaagaatacaacgctttcttttatactttggtatca
acagacacccaagaaatgttttattctgggaaacgacaaagatttttgataaaccaggga
tacagtttcaaggttataacgaaactggctggtatggacgaggagaatttagcctatgca
accaaacgagaccagcaagaactgctccaaaaggtattggcagccagtgacgctgatgca
gatgaagaaggggacgctcaatcgcgatcatcatcgcaaaactccagtgctgttgttcga
cgaactggttcaatggcatctttatctggagcagacagcatggtataccttgagtatcga
aagccaaataaagacagacatcctttatttaaaaaacttcgaaaataa
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integrated database retrieval system
