Dendronephthya gigantea (soft corals): 114526441
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Entry
114526441 CDS
T06112
Name
(RefSeq) putative RNA exonuclease pqe-1 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114526441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dgt03009
]
114526441
Ribosome biogenesis [BR:
dgt03009
]
Eukaryotic type
Pre-60S particles
RNases
114526441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Med15_N
Motif
Other DBs
NCBI-GeneID:
114526441
NCBI-ProteinID:
XP_028403842
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MFPSGGYFRSANCPFFQHGLCHRPYCHFRHTKPEYKPSSTPSAKQMQITVPEAVQGESKV
VKSSYQPFKSTKEESRIKSKTLVKDKADETPDKTSQSTTSTKPLFKRTALEEKLIAFSEN
ANEFLSDSDSSDVETLQKEKKALKGSKIEYSVAPENKAGGEILGTISNESTPILKEGASL
AAKNSLPVNSVVTEGQAKQEKTITKGSVGKYNDLETGENTISQSVRNEINKSENCEGKNA
DKEKCQSERTQHKLSRDAPTDAVLSGNVEDSSNSCKNEVLEKMEIEKSDNEQNTKPEEVK
SLNSIISDLQKYGTGIEVKTKKDNHKDEIEIGKKEKPKPEPPKLTDVNFFSANVSKQSKK
ISKDEKSPKKKDATKLKKEDEKREKLTKEKKKLKKTLSESNLGNTKEKSKIQRYKELKKL
VKDSEKNMDAVKDPDKSSPSGSREKSRTKKAEKGKEIKEPIKNVKKKSTTAETSDTISSS
MMDKKPEKRHKEFVQKTSVMRVSSNPELSCRKSVVESDFDNSMEDDSEENELLRIFNDYD
PGDEPDIMDSMNDHVDFEMRDISNDAVQPMPKSIGQKRSSAELESIPVGFKKQRVAHQPG
LVIRRATTSRSNSNPFRILPRPLQGTLAPPPRQPPQSIKPQGERDLVSSTHVKQRITHYT
KSSGTVFQRPRIRLEYGAKVPQSVRQKYLDKLVDEYLSTYEDQQEAFNKAEKEEKEIYIK
SPRRQVYINLCVNLIKKLRDVTEPSDVDGGNKRNPLATKSTLPSPKKKLKIDPTASASVA
KVIQSVENNVENKPKGAVFEDGKITEEEFYTRMQKYVLAKEELEGNGYPRPSSIPGHAEI
TDVYSKQKRNVNDPTRHICCRCGKAFVILESGEYPNKEECVYHHGRLLRTRTAGEIVTSY
TCCQGESGCIGCSISKAHVRPTYWSEETGFAETRQNPKPTKKKIYALDCEMCYTSKGLEL
TRVTVVDYKCEEIYDTLVKPENDIIDYNTRFSGITEESMIGVTMSLRDVQSVLLSMFYED
TILLGHSLESDLRSLKIIHSTVVDTAIVFPHRLGLPYKRALKTLMAEYVRKIIQDGAEGH
DSLEDAVSCVELMLWRVKERGENMKIKERKR
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgtttccttctggcggctattttcgtagtgcaaactgtccgttctttcaacatggcctt
tgtcacagaccatactgccattttcgccacacaaaaccagaatacaaacctagctcaaca
ccaagtgccaaacaaatgcaaatcactgtaccagaagcagtccaaggagaaagcaaagtt
gtcaaatcatcatatcaacctttcaagagtacaaaggaagaatcaagaattaagagcaag
actttggtgaaagacaaggctgatgaaacaccagataaaacaagccaatcaactacctct
accaagcctctgtttaagaggactgctttagaagaaaaactgattgcattttcagagaat
gcaaatgaattcctttctgactctgatagtagtgatgttgaaactctgcaaaaagaaaaa
aaggccttaaaaggttccaagattgaatatagtgttgctccagaaaacaaggctggagga
gaaatcttaggcactatctctaatgaaagtacaccaattctcaaagaaggtgcttctctt
gcagccaaaaactctctacctgtcaatagtgtagttacagaaggtcaagctaaacaagaa
aaaacaattacgaaaggctctgttggtaaatataatgatttagaaactggtgaaaataca
atttctcaaagtgtgagaaatgaaattaataaatctgagaattgtgaagggaagaatgca
gataaagaaaaatgtcagtcagaaagaactcaacataagttatctagggatgcaccaaca
gatgctgtgttatctggaaatgttgaagacagcagcaacagctgcaaaaatgaagttttg
gaaaagatggagattgagaaaagtgataatgaacaaaatactaaacctgaggaggttaag
agtctaaacagtataatcagcgatctgcaaaaatacggaactggaattgaagtgaaaact
aaaaaggacaatcataaagatgaaattgaaattggtaaaaaagaaaagcccaaaccggaa
cctcctaaattgacggatgttaattttttcagtgcaaatgtttccaagcaaagtaaaaag
atttcaaaagacgaaaaaagtcctaagaagaaggatgctactaaacttaagaaagaagat
gaaaaacgcgagaaattgacaaaggaaaagaaaaagctgaagaaaacattgagtgaaagc
aacttggggaatactaaggaaaagagtaaaattcagcgttataaagagttaaaaaaactt
gtcaaagattctgaaaaaaatatggatgccgtcaaagaccctgataagagttcaccttca
ggttctagggaaaaaagtcgcaccaaaaaggcagagaaaggtaaggaaataaaggagcca
atcaagaatgttaagaaaaagtcaaccactgcagaaacatctgatacaatatcgtcctct
atgatggataaaaaacctgagaaacgacataaagaatttgtgcagaaaacgagtgttatg
cgtgtttcttcgaatcctgaactgagttgtaggaaaagtgttgtcgagtcagattttgat
aatagtatggaggacgacagtgaggaaaatgaactgttaaggatatttaatgattatgat
cctggcgatgagccagatattatggatagcatgaatgaccatgtggattttgaaatgagg
gatatatcaaatgatgccgttcagccaatgcccaaatctataggacagaagagatcatct
gcagaactagagtcgattcctgtgggatttaaaaaacagcgggttgcacatcagcctggt
ctagtaattcgacgtgcaacaacatcaagaagtaattcaaatccattcagaattttgcct
cgtcctttgcaaggaacattggctccccctccacgtcaacctcctcagtctattaaaccc
cagggagaaagagatctagtctcgtcaactcatgtgaaacagagaattacacactacacc
aaatcttcaggaactgtttttcaaagacccagaataaggctggagtatggggccaaggtt
ccgcaaagtgtgaggcagaaatacctggataaactcgtcgatgaatatttgagtacgtac
gaagatcaacaagaagcattcaataaggcagaaaaagaagagaaggagatttacataaaa
agtccaagacgtcaagtgtatatcaacttgtgtgtaaatcttatcaagaaactacgtgat
gttacggaaccatcagacgtggatggtggtaacaaacgtaatccattggctactaaatca
acgttacccagcccgaaaaaaaagcttaaaattgaccccacagcttcggcaagtgttgcc
aaagttattcaaagcgttgaaaataatgtcgaaaataaaccgaagggtgcagtatttgaa
gatggcaagataacagaggaagagttctatactcgaatgcagaaatatgtattggctaaa
gaggaattggagggaaatgggtaccctcgaccctctagtattccaggtcatgctgagata
actgatgtttactcaaaacaaaaaagaaacgtaaatgatcctacacgccatatttgctgt
cgatgtggtaaggcattcgtgatcttagagtctggagaatatcccaataaagaggagtgt
gtctaccatcatggtcgcttgcttcggaccagaactgccggggagatagtgacgtcgtat
acatgttgtcaaggtgaatctggatgtataggatgctctatttcgaaggcacatgttaga
ccgacgtactggtctgaagaaacaggatttgctgaaactagacaaaatccaaaaccgaca
aaaaagaaaatttatgccttagattgcgagatgtgttacacgtcaaaaggcctggaattg
actcgagttactgtggtagattataaatgtgaagaaatctacgatactctggtgaaacca
gaaaacgacattatcgattacaatacaagatttagtggtataactgaagagagcatgatt
ggagtgacaatgtcattacgcgatgttcagtctgtattgctgagcatgttttatgaggat
accatattactaggtcacagtctggaaagtgacttaagatccttgaaaataattcacagt
accgttgtcgacactgcaatagtatttcctcatcgtcttgggttaccttataaaagggcc
ctgaaaacattaatggctgaatatgtgaggaaaataattcaggatggcgcagagggtcat
gatagtttagaagatgctgtgtcttgcgttgagttaatgttatggcgagtaaaggaaagg
ggggaaaacatgaaaataaaagaacgaaagaggtga
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