Dendronephthya gigantea (soft corals): 114526990
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Entry
114526990 CDS
T06112
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114526990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dgt04121
]
114526990
Enzymes [BR:
dgt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114526990
Ubiquitin system [BR:
dgt04121
]
Ubiquitin ligases (E3)
HECT type E3
114526990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
114526990
NCBI-ProteinID:
XP_028404345
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MVEMYAWGRADSGQLALGETEDEHVHLPLRVPYYEGFTSKVVDVACGSQHTVFLTDDGMV
YTCGSNDSGQLGHGKVCRKPERIDSIETMTIKQVACGQDFTLALSDKGKVLSWGNNRKGQ
LGHTHRDIIHRPRTIKHFSEIRVTQVCCGTHHSLALVEDGRLFSWGDNSHGQLGTGQMTP
SSSPIIPCLVDALTGVPLVEISAGGYHSMTLSISGAVIGWGKNDSGQLGLDNGTDQWLPV
QIELVRSQRVKHIACGEDHTALLTEDGGVFTFGSGTNGQLGHNSNSHQNQPKKVVELMGT
LITQIVCGRRHTVAFAPQSGRVYSFGLGAYGQLGSGGTNSCNSPVVADGPWTTPIIRVVA
GGDHCFVLTANTDAGTKDMRMINLRLSIIHHTVVEEIEERIRNRSSISSEHGRKLEAIFS
NQQCLNSCFFNRRKNLVTDNHNHAVDLSAARRFFQALASHPQVNEMVLNALEKHLIPSLR
GEPIDVDCLRLYVILPEYEMFRAAERYKTLAVPLAKKLLSLHQKYRIIIGNWWAKLPSTY
IERIIKIFQECVKFILEQQIDQRDSQEFTVREECLRCSLEILEGVHKVNQRAENSVPYPV
FYIPELTDCLDLRSDYLRWVQNVSTTDNKISEKTTLSFCKYPFVFDPKAKYLLLQIDASM
QMQMAFRDAHQANIGNLLFNGGVLPQNAIINPFLVLRVRRENIVQDTLSQVIRLGPMEYK
KPLQIVFQGEQAVDAGGVKKEFFLLLMRDILDPKYGMFKTIEENRLIWFNKQSFEEEMMF
LLIGVICGLAIYNSIIIDLPFPALLYNKLLKRPITLDDFRTFQPSVARNLQQLLDYPEEE
VESAFCLNFQVNEEYYGVISAENLIPDGENVPVTGQNRDRYVDAYIDYIVNKSVEKHFIA
FSNGFHRVCGGRVLEFFHPQELMEMVVGIQDYDFNELKEGAEYLGEYYSNHPVIKNFWDV
FNDFEIAYKKKFLVFLTGTDRVPLTGIRSLNIKIQPVSGGVNNEHLPVAHTCFNLLDLPR
YPTQEMMKQKLEQAISFSSGFGLA
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaatgtacgcttgggggcgagcagattctggtcagcttgctttgggagagacg
gaggacgagcatgttcatttgccgttgcgtgtaccgtattacgaggggtttacatccaaa
gtagttgacgttgcatgtgggtctcagcatacggtattcctgacagacgatggtatggta
tacacctgtggtagcaatgattctggacaacttggtcatggtaaagtctgcaggaaacca
gaaaggatcgattctattgagacaatgaccataaaacaagtggcttgtggtcaggacttt
acgctggcgttgagtgacaaaggcaaggttctcagttggggaaataacaggaaaggacaa
ctaggacatactcatcgtgacatcatacatcgaccaaggacaatcaagcattttagtgaa
attcgtgtgacgcaggtttgctgtggaacacaccattccttggccttggttgaagatggc
agactattcagctggggtgataattcccatggtcaacttggtacaggtcaaatgacccca
tcatcatccccaattatcccttgtttggtggacgcgctcactggcgtaccattggttgag
atatctgctggcggatatcacagcatgactcttagcatatctggagctgttattggctgg
ggaaaaaacgattctggccaacttggactggataatggaacagatcaatggcttccagtg
caaatagagttggtcagatctcagagagtgaaacatattgcttgtggtgaggatcacaca
gcacttcttactgaggacggaggtgttttcacatttggttctggaacgaatggccagctc
ggacataactcaaattcacatcaaaatcagccgaagaaggttgttgaactaatgggtaca
ttaatcacacagatagtttgtggaaggcgacatacagtagcgtttgcacctcagtcaggt
cgtgtctactcattcggtcttggtgcatatggtcagctaggttcaggtggaacgaacagc
tgcaacagccctgtggtcgcagatggtccatggacaaccccaattattagggtagtggct
ggtggggatcattgttttgttttaactgcaaacaccgatgctggcacgaaagatatgcgc
atgattaatcttcgcttgtcgatcatacatcatactgtagttgaagaaattgaagagaga
atcagaaatcgaagtagtatttccagcgaacatggaaggaaactcgaagcaatattttcg
aatcaacagtgtctaaacagctgcttcttcaacagaaggaaaaatttggtcacggacaat
cacaatcatgcagtggaccttagcgctgcgagaagatttttccaagccttggcaagtcac
ccccaagtcaatgaaatggttttaaacgctttggagaagcatcttataccatctctccgt
ggagaaccgatagatgtcgattgtttacgattatacgtcatcttaccagagtacgagatg
tttcgcgctgctgagcgctataaaacgttggcagtaccgctggctaagaaattactgtcg
cttcatcagaagtatagaatcattataggtaactggtgggctaaactaccgtcaacgtat
attgagagaatcataaagatttttcaagaatgcgttaaattcatattagaacaacaaatt
gatcaacgggacagccaggagttcacagtacgagaggaatgtctcagatgcagtctggaa
attttagaaggcgttcacaaggttaaccagcgtgccgaaaactcggttccatatcccgtg
ttttatatcccagagctgacagattgcctcgatctaaggagcgattacttgagatgggtt
caaaacgtgagcacaacggacaataaaattagtgaaaagacgacactctccttttgtaaa
tatcctttcgtgttcgacccgaaagcaaagtatcttctcctacaaatcgatgcctcaatg
cagatgcagatggcatttcgagacgcccatcaggcaaatattggcaatcttctgtttaac
ggaggtgtgcttcctcagaacgcgattattaatcctttccttgtacttcgtgtaaggcga
gagaatatagtccaggatacactgagtcaggtgatcaggcttggaccaatggaatataag
aaaccactccagatcgtcttccaaggtgaacaagctgttgatgccggtggggttaaaaag
gaattttttcttctgttaatgcgagatattctcgatccaaaatacggcatgtttaaaacg
atcgaggaaaaccgcctgatctggttcaacaaacagtcttttgaagaagaaatgatgttc
cttctcatcggagtcatttgtggcttggccatttataattccatcataatcgaccttcca
tttcccgccttgctatacaacaaactcttaaaaaggccaataacgttggacgattttcgt
acatttcagccgtccgttgccagaaaccttcaacagttgcttgattaccctgaagaagaa
gtggaaagcgcgttttgtctcaattttcaagtaaacgaggaatattacggtgttatcagc
gcagaaaatttgatcccggatggggaaaatgtgcctgttactggacagaacagagaccgt
tacgttgatgcgtacatagattacatcgtcaataaatccgtcgagaaacatttcatagct
ttctcgaatggtttccatcgcgtttgtggtggacgagttttggaatttttccacccgcaa
gaactgatggaaatggttgtggggatacaagattacgacttcaatgaattaaaagagggt
gcagaatatctgggcgagtattactccaatcatcctgtaataaagaatttctgggatgta
tttaacgattttgagattgcatacaagaagaaatttcttgtttttcttacgggaaccgat
cgtgtgcctttgacaggaatacggagcttaaatataaagattcagcctgtttcaggcggt
gttaacaacgagcatcttcctgtagcgcacacgtgtttcaacttgctggatttaccgcgt
tatccaacccaagaaatgatgaagcaaaaactggagcaagcaatcagcttctcctcaggt
tttggattagcgtaa
DBGET
integrated database retrieval system
