Dendronephthya gigantea (soft corals): 114527092
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Entry
114527092 CDS
T06112
Name
(RefSeq) polypyrimidine tract-binding protein 1-like isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114527092
03041 Spliceosome [BR:
dgt03041
]
114527092
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
114527092
Spliceosome [BR:
dgt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
114527092
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
HypD
Motif
Other DBs
NCBI-GeneID:
114527092
NCBI-ProteinID:
XP_028404488
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MSFIKLEPVDSFSSPDRKRGSDQFLELDSEFAEKRQKKFNDAPPSKVLHIRNLPDSASEG
DVIALGVRFGRIVNILKITKGKGRPQAFLEMEDISKAEEMVKYYEYSPAKINGTNVYVQF
SSHKELKIEKQSPTIANLLTAAALATSGGLGLPSSGDSSNSFGNALNNGDGLLPNPSAPN
NSHEGPSNSNVLRVVVDNMLYPVSIDALNLIFSKYGAVIKIVICTKTNQFQVFVQYADNV
PAKAARSALDGQNIYNGCCTMKIGFSKYNNLNVKYNNDKTRDFSRPDLPSGEGQPSFDPN
LGLSAIGAVLSNPFLAASAAAATVPNLGLLGAGNMLQGIGTSNSGMQGPGPGPGDDRRSR
GRDYDDRAGKTVLLVSELNAERIKCDDLFTLFGAYGDVMRVKILFHKPNTALIQFADPQH
AQTARENLNEIRFQGNKIRVSTSKHDGISMPKKDGEGEHLTKDYSRSPAHRFKQYGSKNY
QNIFPPARVLHLSNIPGNVTEEDIRSLFSSKTEGKLTHFEFFTKEIARGKKMALVEMGSV
EEAVQALVDLHDYPIGDDSHLRISFSKKTIRP
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagctttataaaactggagccagtggacagcttcagttctccagatcgaaagcgtgga
tctgatcaattcttagagttggattctgagtttgctgagaagcggcagaaaaagtttaat
gatgcgcctccatcaaaggtcctccacattcggaatttaccagactcagcaagtgaagga
gatgttattgcacttggtgtacgatttggcaggattgtcaacatcttaaaaataacaaaa
ggaaaaggaaggccacaggcatttcttgagatggaagatataagcaaagctgaggagatg
gtgaagtattatgaatattcacctgcaaaaataaatggtacaaatgtttatgtacagttc
tcttcacacaaggagctaaaaatagagaaacaatctccaacaattgcaaacctattaact
gctgcagctttggccacatctggaggcctgggactgccatcatctggggacagctcaaac
agttttgggaatgcattaaataatggagatggtttactgccaaacccttcggcaccaaat
aactctcatgagggcccaagtaacagtaacgtgttgagagtggttgtggataacatgctg
tatcctgtatctattgatgccctgaatcttatattttctaagtatggagcagtaatcaaa
attgttatttgtaccaagacaaatcagtttcaagtatttgttcagtatgcagacaatgta
cctgcaaaagctgccagatcggctttagacgggcagaatatttacaatgggtgctgcaca
atgaaaataggattttcaaaatacaacaatttaaatgtgaaatacaacaacgataaaacc
agggatttctctcgaccagatctaccgtcaggtgaaggacaaccatcatttgatccaaat
cttggtctctctgctataggtgcagttttgagcaacccgtttcttgctgcgagtgccgcc
gctgccacagttcctaatcttggtcttttgggtgcgggaaatatgctgcaaggcatagga
acgtccaactctggtatgcaaggcccaggccctgggccaggtgatgacagacgcagcaga
ggccgagattatgatgacagagctggaaaaacagttttacttgtcagtgaattgaatgct
gagaggatcaaatgtgacgaccttttcacattgtttggtgcttatggtgacgttatgcgt
gttaagattctcttccacaaacctaacacagctcttatacaattcgcggaccctcaacat
gctcaaacagctcgtgaaaatctgaacgaaattcgtttccaaggaaataaaataagagtc
agcacgtcaaaacatgacggcattagcatgccaaagaaagacggggaaggtgaacatctg
acaaaggattactcgagatcgccggctcatcgatttaaacaatatgggtcgaagaattat
caaaatatttttccgcctgccagagtgcttcacttatcaaatattcctgggaatgtaaca
gaagaagacataagatcgcttttttcatctaaaactgaaggaaagctcacccactttgag
ttcttcacaaaagaaattgcacgaggcaagaaaatggcactggtggagatggggtctgtg
gaggaagcagttcaagcattagtggatcttcatgattaccctattggtgacgacagtcat
cttcgtatctctttctcgaagaagacaatccgaccataa
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