Dendronephthya gigantea (soft corals): 114527207
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Entry
114527207 CDS
T06112
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114527207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dgt03041
]
114527207
Enzymes [BR:
dgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114527207
Spliceosome [BR:
dgt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
114527207
Complex B
114527207
Complex C
U2 SnRNP specific factors
114527207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114527207
NCBI-ProteinID:
XP_028404653
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MFHKGSKEKQRGIGFGGFTVSSKPKQQTLQPSPVQTSFAQRTGRQRGPGHSESAVFKRPA
NFGDNDSDSDDNVTYHKESQVYEPKPIGSNNDEGDDEEDELDKFMAGIEQEVEREKNLSV
AQQEEKASKKSRRDDIEDEDDQESFFRVMKEVPLEYYPDDDEEIDYDSDGNPIAPPRSKI
IEPLPPIDHSEIAYQKFAKNFYEEHEEIKKLTEADVIKLRQSLGVKVSGAQPPRPAVSFA
HFCFDEGLLSSIRKSEYTKPTSIQSQAVPAAISGRDILGIAKTGSGKTAAFLWPMLVHIM
DQREMQDGDGPIGLICAPTRELSQQIYLEAKKFGKVYNIRVACVFGGGNKYEQSKALKEF
PEIIVATPGRLIDHIKDKTTNLERVTFLVFDEADRMFDMGFEPQVRSIANHVRPDRQTLL
FSATFKKKVEMLCRDILTDPVRIVVGELGEANEDVTQIVQIFNDGARKWQWLTANLVRFT
SEGSVLIFVTRKLNSEELANNLKKNDFELLLIHGDMDQFERNKVITSFKKKEFSILVATD
VAARGLDIPSIKTVINYDVARDITTHTHRIGRTGRAGEKGVAYTLMTPGDQNFAGDLVRN
LEIANQNVSEELLELAMKNAWFKKSRFRGGKGKRGSGGVRERPGLGAPEAGSTSGPMGSA
KSLSSYSSTVSASAGSGPSSSRLNALKAAFSSQYRSHFTASTANNKWDASKEHSTVNPLE
DQASLNKEEKRKAKKSRWN
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacaaaggatcaaaagaaaaacaaagaggcatagggtttggtgggtttacagtt
agtagcaagccaaaacaacaaactttgcaaccatctccagtgcaaacctcttttgcacaa
cgtacagggagacaaagaggccctggacactcggaaagtgctgtttttaaaagaccggcc
aactttggggataacgatagtgatagtgatgataatgtgacatatcacaaagaaagtcag
gtgtatgaacctaaaccaattggatctaataatgatgagggtgacgatgaagaagatgaa
ttggataaatttatggcaggaattgagcaagaggtagaaagggaaaagaacttatcagtt
gcacaacaagaggaaaaggccagtaaaaaaagtagacgagatgatattgaggatgaagat
gatcaggaatcattcttcagagtaatgaaggaggttccacttgaatattatcctgatgat
gatgaagaaatagattatgacagtgatggtaatcctatagccccgccaagatcaaagata
atagaaccattgccacccattgaccactctgagattgcttaccagaaatttgccaaaaat
ttttacgaagaacacgaggaaattaagaaattaacagaagcagatgtaattaaattgcga
caaagtttgggggttaaggtatctggtgctcaacctcctcgtcctgccgttagttttgct
catttctgttttgatgaaggtttgctaagttcaataagaaaatctgaatatacaaagcca
acttctatccaaagtcaggcagttcctgcagctatcagtggtcgtgatatcctcggtatt
gccaagactggttcaggaaaaactgccgctttcctgtggccaatgttggtacacattatg
gatcagagggaaatgcaggatggcgatggacctatagggttaatatgtgcaccaacacga
gaactttcacaacagatatatttggaggcaaaaaagttcggaaaggtttacaatattcga
gtggcgtgtgtatttggcggtggtaacaagtacgagcagtcgaaggctctgaaagaattt
cctgagattattgttgcgacaccaggtcgattaattgatcacattaaggataaaactaca
aatctggaaagagttacattcttggtttttgatgaagctgatagaatgtttgatatgggt
tttgaaccacaggttcgatccattgcaaatcatgtacggccagacagacaaactttatta
ttcagtgcaacatttaaaaagaaagttgaaatgctctgtcgagatatattgacagaccca
gttcgaattgtcgttggggagctgggtgaggctaacgaagatgttacacagattgtacaa
atattcaacgacggtgcaagaaaatggcaatggcttaccgcaaatcttgtacgctttaca
tctgagggaagcgttcttattttcgtaacaagaaagttaaatagcgaagaactggctaat
aatttgaaaaagaacgattttgaactcctcctgatccacggtgatatggatcaatttgag
agaaacaaagtgatcacatctttcaagaagaaagaattctcgatccttgttgcaactgat
gtcgcggctcgtggtctggatattccttctattaaaactgtcattaattacgacgttgca
cgtgatattacaactcatactcatagaattggaagaactggtcgagcaggtgaaaagggc
gttgcatacactttgatgacgccaggtgatcaaaatttcgctggagatcttgtgcggaat
ttggaaatagccaatcaaaatgtttcagaggagttacttgaattggcaatgaagaacgca
tggtttaaaaaatcgaggtttagaggtggcaagggcaaaagaggaagtggtggcgttcgt
gaaagacctggattaggagcgcctgaagcgggttcaacgtctggtccaatgggatcagct
aaaagtttgtcctcatattcgtcaacggtgtcagcctcagctgggtcaggtccaagcagc
agtaggttgaatgccttgaaagctgcattttcttcgcaatacagaagtcattttactgcg
tcaactgctaacaataagtgggatgcttccaaagaacattcaactgtgaacccactggaa
gaccaggcttcactcaacaaggaagagaaacgcaaagctaagaagtcgagatggaactga
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