Dendronephthya gigantea (soft corals): 114527524
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Entry
114527524 CDS
T06112
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114527524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114527524
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114527524
mRNA degradation factors
3'-5' decay
Pan complex
114527524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Torus
zf_CCCH_4
HIGH_NTase1
Motif
Other DBs
NCBI-GeneID:
114527524
NCBI-ProteinID:
XP_028405015
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MSNSANRPVKATLCRYFASDGKCFFGESCQYVHAKPAGNTQSGDKSFTILPSTSGYPSGE
AANKYATGNTEPNALTKNFSGLSINALEVSEQPQNLANPLSPKGSNTSRRPSANQGFEFL
PTATNHAIQSESIGGTTFFYPDSQPAEPSIILPSYHVYPSTPSHLANLQTSSKPMANSFF
ISSQIRQDLLNQHSATLAQLNPDDTSIPREVESYNSLVPLEPIDSIANQQSRRTFGCITT
CYKCVSSKDGLTYVLRKMHGIRLTNTKAKGIVDEWKKLQHSNLVHLREMFTTKTFDDNSL
VFVYDYHPGAETILQRHFSESLTGLMNIKDGQNGVVHQQLPPGRKMFTPGSTASGRQQFM
AERLIWNYIIQLSSALRSIHSLMLACRVIEPSKILVLSNSRLRINGCGIFDVLDSNNSTS
MVQHYQQEDLVSFGRLILMLACCSLQAVNRENIQQSMEIISLKYSNDLKNLILYLLRQPP
PNHIKSINDVMPMIGARFYTQLDAAQLRCDVLQGELAKEMENSRLFRLLCKMGSINERPE
FNMDPSWSETGDRYLIKLFRDYLFHQVTETGEPWLDMSHIVSSLNKLDCGSPEKICLISR
DEQSVLVVSYHDLKACFDGAFNELSTLSS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattccgcaaacagacctgtgaaagctacattatgccgttattttgcctcggat
ggaaaatgtttctttggtgaatcgtgtcaatatgtacacgctaaacctgcaggaaacact
caatcaggtgataaaagtttcacaatcttgccatcaacaagtgggtacccttcaggtgaa
gctgctaataaatacgctactggaaatactgagccaaatgcattaacaaagaacttctca
ggattatcaattaatgctttggaggtatctgaacagccacagaatctagccaatcctctt
tcacccaagggaagtaatacatccagaagaccttcagcaaatcaaggctttgaatttctt
cccactgcaacgaatcatgcaattcagtcggaatccattggtggtacaacattcttttat
ccagattctcaaccagcagaaccatcaattatcctcccctcatatcatgtctatcctagt
actcccagccaccttgcaaacttacagacttcctcaaaaccaatggcaaattcctttttt
atttcatcacagatacgacaggacctactcaatcaacactcagctacgttggcgcagtta
aatccagatgatacgagcattccacgtgaagttgaaagttataactcattggttccatta
gagccaattgattcgatcgccaatcaacagtcccgtcgaacatttggatgcataaccact
tgctataaatgtgtcagctctaaagatggtttgacttacgttttaagaaagatgcacggt
attcggctaacaaacacgaaagcaaaggggattgttgacgaatggaaaaaacttcaacac
tcaaatttagttcatctccgggaaatgtttacgacgaaaacatttgatgataattcttta
gtgtttgtgtacgattatcatcctggtgcagaaacaattctacaaagacatttctcggaa
agtctgactggtctaatgaacataaaagatggtcaaaatggtgttgtacaccaacaatta
cccccagggcggaaaatgttcactcctggcagcactgcctcaggtcgacaacaattcatg
gcggaaagattaatttggaactacataattcagctttcgtcagccttaagaagcattcat
tccctgatgttggcgtgtcgagttattgaaccatcgaaaattctcgtactgtccaattca
aggttacgaattaatggatgtggaatatttgatgtcctggattcaaataacagtacctca
atggttcaacattatcaacaagaagatcttgtttcgtttggaagactgatattgatgctc
gcatgttgttcgttgcaagctgtaaaccgcgagaatattcagcagtcaatggagattata
agcctgaaatactccaacgatttaaaaaatttaattctgtatcttctcagacaacctcca
ccaaatcatataaaaagtattaatgacgtgatgccaatgattggcgcaagattttatact
caacttgatgctgctcagctccgatgtgatgtactgcaaggggaattagcaaaggaaatg
gaaaacagtcgactttttcgcttgctatgcaaaatgggatctatcaatgaacgaccagaa
tttaacatggacccaagttggtcagaaacaggtgatcgttacttgatcaaactatttcga
gattatttatttcatcaagtgacagaaactggcgaaccttggcttgatatgtcccacatt
gtctcttcgttaaacaagcttgattgtgggtccccagaaaagatatgtttaatatcacga
gatgaacaaagtgttcttgtggtatcatatcatgatctgaaggcgtgttttgatggtgcc
ttcaacgaattatcaacattatccagctaa
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