Dendronephthya gigantea (soft corals): 114528068
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Entry
114528068 CDS
T06112
Name
(RefSeq) transcription factor Sox-3-A-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dgt03000
]
114528068
Transcription factors [BR:
dgt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114528068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
114528068
NCBI-ProteinID:
XP_028405446
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MASGNLTTLETVIATNYNRRSPPASNMPDPGRLKCPLNAALDSVMSVNYNMNGSQPVNVK
MLLNTDVIKEEPLDCTDLSRTTQCDVVTSTPGLMADPGRITAPMNILDISSGVVNRNGPV
NMASNHDLNPEDEISTNNEMKNSTKMASSDRDPDRVKRPMNAFMVWSREKRRVMAQENPK
MHNSEISKRLGDKWKKLSTSDKQPYIEEAKRLRAQHMKDFPDYKYRPRRKTKTLLKKEKY
NISLLGDCDGGPPVQRNIAHVSDYYSYPNLGYPPQDLFNTMYNTGHGYNTGLSNEPFQGA
TTSVNSYYPASVYTIQAGQIYSYNSEHQNPTNGHDVQAIPPPTSYPQETIMLTNGGIQIK
KELDDDHQRRSYPGDLHEMINVYLPADANANHRTRTNHVEHFQNNQDSYNTNHIVDGSTI
NPSVIRPNPRSSAATMPLTHL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagggaatttaacaacgttggaaaccgtgatcgcaacgaattataatagacgt
tcgccaccggcttctaacatgcctgatcctggccgtttaaaatgtcctctaaatgcagct
ttggatagtgtcatgtctgtcaactataacatgaatggatcgcaaccggtcaatgttaaa
atgttgttaaatacagatgttatcaaagaagagccgttggattgtacagacttgagtcga
acaacacagtgtgatgtagtcacaagtacaccgggcttaatggcggatcctggtcgtatt
acagcccctatgaatattttggacatctcaagtggtgttgttaatagaaatggccccgtc
aatatggcgtctaaccatgacctgaaccctgaagatgaaatttctacgaacaatgaaatg
aaaaattctaccaagatggcgtcgtctgatcgcgatccagaccgcgtgaagaggcctatg
aatgctttcatggtttggtcccgagagaaacgacgtgttatggcacaagagaatcccaag
atgcataattcggaaatctctaagagacttggagataagtggaaaaaattaagtacaagt
gataaacaaccgtacattgaggaggctaaacgattgcgtgcccagcatatgaaagatttt
cccgactacaaatatcgtccacgaagaaagaccaagactttattgaagaaagagaaatat
aacatttctttacttggagattgtgatggtggcccaccagtacagagaaatattgcacat
gttagtgattattattcctatcctaatcttggctaccctccacaggatttatttaataca
atgtataatacaggacatgggtataacacagggttatccaacgaaccattccaaggagcg
acaacctcggtgaactcgtactacccggcttctgtgtataccattcaagctggtcagata
tacagttataattctgaacatcagaatccgacgaacggccatgatgttcaggcaatccca
ccaccaacgagttatcctcaggaaactataatgttgacaaatggtggaattcagataaaa
aaggagttagacgacgaccaccaaagacgaagctatcctggagacttacatgaaatgatc
aatgtatatctacctgcagacgccaatgcaaatcatcgaacaagaactaaccatgtagaa
cactttcagaacaaccaagactcgtataacacgaaccatattgtagacggtagtactata
aatcctagtgttattagacctaatccaagatccagtgcagccactatgcctttgacacat
ttgtga
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