Dendronephthya gigantea (soft corals): 114528121
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Entry
114528121 CDS
T06112
Name
(RefSeq) fibril-forming collagen alpha chain-like
KO
K06237
collagen type IV alpha
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04512
ECM-receptor interaction
dgt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114528121
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114528121
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dgt04147
]
114528121
00536 Glycosaminoglycan binding proteins [BR:
dgt00536
]
114528121
Exosome [BR:
dgt04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114528121
Glycosaminoglycan binding proteins [BR:
dgt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114528121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
114528121
NCBI-ProteinID:
XP_028405519
LinkDB
All DBs
Position
Unknown
AA seq
1616 aa
AA seq
DB search
MRSSVLLLAVGAVFIASLLIEQSASEQVDCNGCASCRPTCEGEKGERGVRGPTGQQGVQG
IPGHRGEEGPQGVRGLKGEEGEAGPVGPKGNRGKMGHPGHNGRPGSPGIPGNEGPRGDPG
DPGCNGTKGEPGRPGPIGETGNTGPKGFPGQRGMKGEPGKTSGSRQGVKGDQGERGETGA
KGIVGPEGPKGEKGDKGMEGDRGGRGIKGARGMKGEMGIRIESKGQKGEIGQPGLPGEPG
NVSLPLTKGGKEGPIFKGTKGEKGERGMTGNSGQKGDQGPQGDPGSRGEKGTTGPQGDSG
PRGAMGKTGDKGDRGSDGIKGPQGETGERGPIGDPGPTGPPGENGLPGPEGPPGTGPPGP
DGEKGNEGPRGMPGLKGDSGVKGSAGNPGSPATGLPGEKGERGPQGDRGEDGKPGIAGMK
GPEGPKGEPGTPGTDGEKGSRGLDMEGKPGMDGQPGQRGDSGQKGDKGTEGPRGPPGPTD
TVTGPQGEPGPQGDKGDRGVPGQDGQPGGRGAKGDECSTCPLPQPGAKGEPGPRGADGTP
GTAGEFGLKGARGERGEQGQPGLPGAMGVQGDTGDNGAKGASGEKGEKGDVERITGQKGE
KGDRGTKGRRGQSGESGLPGSQGDRGEEGVKGVRGSKGNQGGNGAPGIMGEKGEPGNRGS
RGDSAEKGNRGPQGERGDTGIEGPQGPPGDCKDDSTNQPTDKGEIEGDPGPKGDDGKDGK
DGEDGEKGEKGNPGGVGESGDPGASEKGEQGMKGEKGAKGEVGSFTVGGKGEPGKPGGDG
SSGDKGDRGEQGPPGKAQDKGEKGEKGVPGVKGPSGPPGAIGMPGAPGALGKKGDEGEPG
SPGKDGRDGNDGVGGAKGDKGNSGPAGEDGFPGTKGDAGAAGPKGDTGPKGVTGPPGFRG
EKGDQGVPGNPGERGVEGPVGPPGENGLKGDKGAPGSEGPKGDTGEPGAEGPRGPEGPPG
EKGRMGGEGRPGKDGAPGPQGVEGDVGLPGNPGPEGPPGPQGNKGERGPIGKGDKGSPGP
TGDKGGLGFPGVKGEPGNLGNDGDRGPQGNPGEAGDQGEPGQKGNIGISVSVKGDQGERG
EQGPPGIQGPQGEQGPPGTGSDGLKGARGDKGDVGPKGIEGEQGISGNKGSSGPDGPRGP
QGDAGSRGEKGATGPPGPAGVKGGDGEKGNEGVAGDKGDIGPQGLTGPQGPEGPIGPPGQ
DGPRGEKGDVGVPGIIGKPGQDGPRGDTGLTGGKGDPGPRGPSGDKGAPGVAGPTGDKGR
DGNPGPRGPDGDSGDNGAQGLKGDKGKKGEKGTGTGIPGPEGAQGEKGNQGPSGQDGFPG
DPGPNGDPGRAGDVGAPGNDGPPGADGSQGPRGDVGPNGIRGDIGPPGQMGEKGRRGSPG
QGDFGFMLTVHSQASSIPECPSGTTRMWDGYSLLYIQGNERAHGQDLGEAGSCIRRFSTM
PFLFCNINNVCNLASRNDYSYWLATTEPIPMMPAREQAVEKYIGRCSVCEAPSHVIAVHS
QSTLDPNCPEGWEALYGGYSFLMHISSGSEGAGQLLSSPGSCLKDFRANPFIECHGRGTC
QFYANTYSYWMTTVEAQNQFRTQQPETLKANNLRSRISKCTVCMKSIPDVGNVGNL
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcttctgttttactgttagcagttggcgctgtatttattgcatcattattaatc
gagcaatcagcttcggaacaggttgattgtaatggttgcgcgtcgtgcagacccacttgt
gaaggcgaaaaaggagaaaggggagtgcgcggcccaactggacaacaaggagtccaaggt
atcccgggacatcgaggtgaagaagggccacaaggcgtaagaggactaaagggagaggaa
ggtgaagctggacctgtaggacctaaaggaaatagggggaaaatgggtcatcctggacat
aatggaaggcctggtagtccgggtatccctggtaatgagggacctcgtggtgatcctgga
gatcccggatgtaacggaacaaaaggcgaacctggccgaccaggtcccattggcgaaaca
ggaaacactggtccaaagggttttcctggacaacgcggaatgaagggagaaccaggaaag
accagtggatcgcgacaaggagtgaagggtgaccaaggagagaggggtgaaaccggagca
aagggaattgttgggcctgaaggaccgaaaggcgaaaagggagacaaaggaatggaaggc
gacaggggtggaagaggtatcaaaggtgccagaggaatgaagggtgaaatgggaatccgt
attgaaagtaaaggacaaaagggtgagataggtcaacctggcttgcctggtgaaccaggg
aatgttagcttaccacttaccaaaggaggaaaagaaggtccgattttcaaaggaacaaag
ggtgagaagggtgaacgagggatgactggaaatagcggccaaaagggtgatcagggaccg
caaggcgacccaggcagtcgtggcgaaaaaggaacgactggaccacaaggagattctggt
ccaagaggcgcaatgggaaaaactggggacaaaggcgataggggatctgatggaatcaag
gggcctcagggtgaaacaggggagcgagggccaattggtgatccaggacctacaggacca
ccaggggaaaacggtctaccaggccctgagggaccaccgggtactggaccgcccggtcct
gatggtgagaagggtaatgaaggacctcgaggaatgccaggtttgaaaggggattcgggt
gttaaaggttcggctgggaacccaggttctcctgctactggcttaccaggcgagaagggt
gaaagagggccacaaggagatagaggagaagatggaaaaccaggtattgctggcatgaag
ggtcccgaaggacctaaaggtgaacctggaacaccgggtacagacggagaaaaaggttca
cgtggtttggatatggagggcaaacccggtatggatggtcaacctggacagcgtggcgat
tctggacaaaagggagataaaggaacagaaggaccgcgaggacctccgggaccgacagat
acagtgacgggtccacagggcgaacctggaccacaaggagataagggagataggggggta
cctggtcaagatggccaacccggtggacgtggtgcaaaaggtgacgaatgtagtacctgt
ccactcccacaacctggagctaaaggtgaaccaggccctcgtggtgctgatgggacacct
ggtacagcgggtgagtttggattaaaaggcgcaagaggagagagaggcgaacaaggccag
cccggtcttcctggagctatgggtgtgcagggtgacactggtgataatggtgcaaaagga
gccagtggtgaaaagggcgaaaagggtgatgtagagagaattaccggtcaaaagggcgag
aaaggggatagagggacaaaaggaagaagagggcaaagtggagaatctggtttacctgga
agtcaaggtgatcgcggtgaagaaggtgttaaaggtgtcagaggtagcaagggtaaccaa
ggtggcaatggtgctccagggataatgggggagaaaggtgaacctggaaaccgaggatcg
cgtggtgacagcgctgagaaaggaaacagaggtccacagggtgaaaggggtgatacagga
atagagggaccacaaggacctccaggtgattgtaaagacgactcaactaaccagccaacg
gacaaaggagaaatagaaggtgatcctggcccgaagggtgatgatggtaaagatggcaaa
gatggggaagatggtgaaaagggagaaaaaggaaatccaggtggggttggtgaatctgga
gaccctggggcaagtgaaaagggcgaacagggtatgaagggtgagaaaggagcaaaagga
gaagttggttcctttacagtaggtgggaaaggggaacctggaaagcctggaggggacggt
agtagcggagacaaaggtgataggggtgaacaaggacctccaggaaaagctcaagataaa
ggtgaaaagggtgagaagggagtaccgggagtaaaaggaccatcaggaccaccaggtgcg
ataggtatgcccggagctcctggcgctctcggaaagaaaggtgatgaaggtgaacctggt
tcacccggaaaggatggtagagatggcaacgatggtgttgggggagcgaaaggggacaag
ggcaattcaggtcccgccggcgaggacggttttccaggtacaaaaggtgacgcaggtgca
gccgggccaaagggtgatactggacccaagggtgtaactggacctccaggattcagaggt
gaaaagggagaccaaggtgtgcctggtaaccctggtgaaaggggtgtagaaggtccggtt
ggccctcctggtgagaatggtttgaagggagacaaaggagcacccggtagtgagggacca
aaaggggacacgggggaacccggtgcagaagggccacggggccctgaaggaccacctggg
gaaaagggtcgtatgggtggtgagggtcgaccaggaaaagatggtgcacccggacctcaa
ggagtggaaggagatgttggattaccgggtaatccaggacctgaaggaccaccaggtcca
caaggaaataaaggcgagagaggccccattggcaagggggataaaggaagtccaggaccc
acaggtgacaagggtggtcttggtttccccggagtgaagggagagcctggaaatcttgga
aatgatggagacagaggacctcaaggaaatcctggagaagcaggcgatcaaggcgagcca
ggtcaaaaaggaaacatagggatctcagtgtctgtaaaaggggatcaaggagagagagga
gagcaaggtccaccaggtattcaaggaccacaaggtgaacaaggaccacctggtacagga
tccgatggcctcaagggagccagaggcgacaaaggtgatgtaggccccaaggggattgaa
ggtgaacaaggaatatccggtaataaaggttctagcggtcctgacggaccccggggacct
cagggtgacgctggatcacgaggcgaaaagggagccacaggtccaccaggtcctgctgga
gtaaaaggaggggatggagagaaaggaaacgagggtgtagctggtgataagggtgatata
ggacctcagggcttaactggacctcaaggtccagagggtcctattggaccaccaggacaa
gacggtcctagaggcgaaaaaggtgatgttggtgtcccaggtattatcggcaaaccagga
caagatggaccccgtggcgatacaggcttaactggtggtaaaggtgatcctggtcctcga
ggtcctagcggtgataaaggtgctcccggagttgcagggcctaccggagataagggacgt
gatggaaatcccggtccccggggtcctgatggtgatagcggggataatggagcgcaaggt
cttaagggtgacaaaggcaaaaaaggagagaaaggaacgggaacaggaatacctggacct
gaaggagcccaaggggaaaaaggcaatcaagggccttctggccaagatggattccctggt
gaccctggtccaaatggtgatcctggccgagctggtgatgtgggtgcacccggaaacgac
ggacctcccggagctgatggttcccaaggccctagaggagacgtcggcccaaatggaatt
agaggagacataggtcccccaggacaaatgggtgaaaaaggaaggcgtggttctccaggc
cagggagattttggttttatgttaacagttcacagccaagctagctctatccctgaatgc
cccagcggtacgacgcgaatgtgggatggttacagtttattgtatatccaaggaaacgaa
cgtgcacatggtcaggatcttggtgaagctggttcctgcatacgaagatttagcactatg
cctttcttgttctgtaatattaacaacgtttgtaatcttgcctcacgaaacgactacagt
tattggttagcaacaactgaaccaattccaatgatgccagccagagaacaagcggttgaa
aaatatatcggacgttgttctgtatgtgaagctccgtctcatgtcattgctgttcatagc
cagtctacgttagatccaaattgtcctgaaggatgggaagctttgtatggtggatacagt
ttccttatgcatatcagctctggatcagaaggtgctggtcaattgctatcctcaccaggc
tcctgtttgaaagacttccgcgccaatcccttcattgaatgtcacgggcgtggcacgtgt
cagttttatgccaatacatactcgtactggatgacgacggttgaagcccagaatcaattc
agaacacaacagccagaaaccctcaaagccaacaatttacgaagccgcattagcaagtgc
acagtttgtatgaaatcaatccccgatgtcggaaatgtcggaaacctttaa
DBGET
integrated database retrieval system
