Dendronephthya gigantea (soft corals): 114528121
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Entry
114528121 CDS
T06112
Name
(RefSeq) fibril-forming collagen alpha chain-like
KO
K06237
collagen type IV alpha
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04382
Cornified envelope formation
dgt04512
ECM-receptor interaction
dgt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114528121
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114528121
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
114528121
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dgt04147
]
114528121
00536 Glycosaminoglycan binding proteins [BR:
dgt00536
]
114528121
Exosome [BR:
dgt04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114528121
Glycosaminoglycan binding proteins [BR:
dgt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114528121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
114528121
NCBI-ProteinID:
XP_028405519
LinkDB
All DBs
Position
Unknown
AA seq
1616 aa
AA seq
DB search
MRSSVLLLAVGAVFIASLLIEQSASEQVDCNGCASCRPTCEGEKGERGVRGPTGQQGVQG
IPGHRGEEGPQGVRGLKGEEGEAGPVGPKGNRGKMGHPGHNGRPGSPGIPGNEGPRGDPG
DPGCNGTKGEPGRPGPIGETGNTGPKGFPGQRGMKGEPGKTSGSRQGVKGDQGERGETGA
KGIVGPEGPKGEKGDKGMEGDRGGRGIKGARGMKGEMGIRIESKGQKGEIGQPGLPGEPG
NVSLPLTKGGKEGPIFKGTKGEKGERGMTGNSGQKGDQGPQGDPGSRGEKGTTGPQGDSG
PRGAMGKTGDKGDRGSDGIKGPQGETGERGPIGDPGPTGPPGENGLPGPEGPPGTGPPGP
DGEKGNEGPRGMPGLKGDSGVKGSAGNPGSPATGLPGEKGERGPQGDRGEDGKPGIAGMK
GPEGPKGEPGTPGTDGEKGSRGLDMEGKPGMDGQPGQRGDSGQKGDKGTEGPRGPPGPTD
TVTGPQGEPGPQGDKGDRGVPGQDGQPGGRGAKGDECSTCPLPQPGAKGEPGPRGADGTP
GTAGEFGLKGARGERGEQGQPGLPGAMGVQGDTGDNGAKGASGEKGEKGDVERITGQKGE
KGDRGTKGRRGQSGESGLPGSQGDRGEEGVKGVRGSKGNQGGNGAPGIMGEKGEPGNRGS
RGDSAEKGNRGPQGERGDTGIEGPQGPPGDCKDDSTNQPTDKGEIEGDPGPKGDDGKDGK
DGEDGEKGEKGNPGGVGESGDPGASEKGEQGMKGEKGAKGEVGSFTVGGKGEPGKPGGDG
SSGDKGDRGEQGPPGKAQDKGEKGEKGVPGVKGPSGPPGAIGMPGAPGALGKKGDEGEPG
SPGKDGRDGNDGVGGAKGDKGNSGPAGEDGFPGTKGDAGAAGPKGDTGPKGVTGPPGFRG
EKGDQGVPGNPGERGVEGPVGPPGENGLKGDKGAPGSEGPKGDTGEPGAEGPRGPEGPPG
EKGRMGGEGRPGKDGAPGPQGVEGDVGLPGNPGPEGPPGPQGNKGERGPIGKGDKGSPGP
TGDKGGLGFPGVKGEPGNLGNDGDRGPQGNPGEAGDQGEPGQKGNIGISVSVKGDQGERG
EQGPPGIQGPQGEQGPPGTGSDGLKGARGDKGDVGPKGIEGEQGISGNKGSSGPDGPRGP
QGDAGSRGEKGATGPPGPAGVKGGDGEKGNEGVAGDKGDIGPQGLTGPQGPEGPIGPPGQ
DGPRGEKGDVGVPGIIGKPGQDGPRGDTGLTGGKGDPGPRGPSGDKGAPGVAGPTGDKGR
DGNPGPRGPDGDSGDNGAQGLKGDKGKKGEKGTGTGIPGPEGAQGEKGNQGPSGQDGFPG
DPGPNGDPGRAGDVGAPGNDGPPGADGSQGPRGDVGPNGIRGDIGPPGQMGEKGRRGSPG
QGDFGFMLTVHSQASSIPECPSGTTRMWDGYSLLYIQGNERAHGQDLGEAGSCIRRFSTM
PFLFCNINNVCNLASRNDYSYWLATTEPIPMMPAREQAVEKYIGRCSVCEAPSHVIAVHS
QSTLDPNCPEGWEALYGGYSFLMHISSGSEGAGQLLSSPGSCLKDFRANPFIECHGRGTC
QFYANTYSYWMTTVEAQNQFRTQQPETLKANNLRSRISKCTVCMKSIPDVGNVGNL
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcttctgttttactgttagcagttggcgctgtatttattgcatcattattaatc
gagcaatcagcttcggaacaggttgattgtaatggttgcgcgtcgtgcagacccacttgt
gaaggcgaaaaaggagaaaggggagtgcgcggcccaactggacaacaaggagtccaaggt
atcccgggacatcgaggtgaagaagggccacaaggcgtaagaggactaaagggagaggaa
ggtgaagctggacctgtaggacctaaaggaaatagggggaaaatgggtcatcctggacat
aatggaaggcctggtagtccgggtatccctggtaatgagggacctcgtggtgatcctgga
gatcccggatgtaacggaacaaaaggcgaacctggccgaccaggtcccattggcgaaaca
ggaaacactggtccaaagggttttcctggacaacgcggaatgaagggagaaccaggaaag
accagtggatcgcgacaaggagtgaagggtgaccaaggagagaggggtgaaaccggagca
aagggaattgttgggcctgaaggaccgaaaggcgaaaagggagacaaaggaatggaaggc
gacaggggtggaagaggtatcaaaggtgccagaggaatgaagggtgaaatgggaatccgt
attgaaagtaaaggacaaaagggtgagataggtcaacctggcttgcctggtgaaccaggg
aatgttagcttaccacttaccaaaggaggaaaagaaggtccgattttcaaaggaacaaag
ggtgagaagggtgaacgagggatgactggaaatagcggccaaaagggtgatcagggaccg
caaggcgacccaggcagtcgtggcgaaaaaggaacgactggaccacaaggagattctggt
ccaagaggcgcaatgggaaaaactggggacaaaggcgataggggatctgatggaatcaag
gggcctcagggtgaaacaggggagcgagggccaattggtgatccaggacctacaggacca
ccaggggaaaacggtctaccaggccctgagggaccaccgggtactggaccgcccggtcct
gatggtgagaagggtaatgaaggacctcgaggaatgccaggtttgaaaggggattcgggt
gttaaaggttcggctgggaacccaggttctcctgctactggcttaccaggcgagaagggt
gaaagagggccacaaggagatagaggagaagatggaaaaccaggtattgctggcatgaag
ggtcccgaaggacctaaaggtgaacctggaacaccgggtacagacggagaaaaaggttca
cgtggtttggatatggagggcaaacccggtatggatggtcaacctggacagcgtggcgat
tctggacaaaagggagataaaggaacagaaggaccgcgaggacctccgggaccgacagat
acagtgacgggtccacagggcgaacctggaccacaaggagataagggagataggggggta
cctggtcaagatggccaacccggtggacgtggtgcaaaaggtgacgaatgtagtacctgt
ccactcccacaacctggagctaaaggtgaaccaggccctcgtggtgctgatgggacacct
ggtacagcgggtgagtttggattaaaaggcgcaagaggagagagaggcgaacaaggccag
cccggtcttcctggagctatgggtgtgcagggtgacactggtgataatggtgcaaaagga
gccagtggtgaaaagggcgaaaagggtgatgtagagagaattaccggtcaaaagggcgag
aaaggggatagagggacaaaaggaagaagagggcaaagtggagaatctggtttacctgga
agtcaaggtgatcgcggtgaagaaggtgttaaaggtgtcagaggtagcaagggtaaccaa
ggtggcaatggtgctccagggataatgggggagaaaggtgaacctggaaaccgaggatcg
cgtggtgacagcgctgagaaaggaaacagaggtccacagggtgaaaggggtgatacagga
atagagggaccacaaggacctccaggtgattgtaaagacgactcaactaaccagccaacg
gacaaaggagaaatagaaggtgatcctggcccgaagggtgatgatggtaaagatggcaaa
gatggggaagatggtgaaaagggagaaaaaggaaatccaggtggggttggtgaatctgga
gaccctggggcaagtgaaaagggcgaacagggtatgaagggtgagaaaggagcaaaagga
gaagttggttcctttacagtaggtgggaaaggggaacctggaaagcctggaggggacggt
agtagcggagacaaaggtgataggggtgaacaaggacctccaggaaaagctcaagataaa
ggtgaaaagggtgagaagggagtaccgggagtaaaaggaccatcaggaccaccaggtgcg
ataggtatgcccggagctcctggcgctctcggaaagaaaggtgatgaaggtgaacctggt
tcacccggaaaggatggtagagatggcaacgatggtgttgggggagcgaaaggggacaag
ggcaattcaggtcccgccggcgaggacggttttccaggtacaaaaggtgacgcaggtgca
gccgggccaaagggtgatactggacccaagggtgtaactggacctccaggattcagaggt
gaaaagggagaccaaggtgtgcctggtaaccctggtgaaaggggtgtagaaggtccggtt
ggccctcctggtgagaatggtttgaagggagacaaaggagcacccggtagtgagggacca
aaaggggacacgggggaacccggtgcagaagggccacggggccctgaaggaccacctggg
gaaaagggtcgtatgggtggtgagggtcgaccaggaaaagatggtgcacccggacctcaa
ggagtggaaggagatgttggattaccgggtaatccaggacctgaaggaccaccaggtcca
caaggaaataaaggcgagagaggccccattggcaagggggataaaggaagtccaggaccc
acaggtgacaagggtggtcttggtttccccggagtgaagggagagcctggaaatcttgga
aatgatggagacagaggacctcaaggaaatcctggagaagcaggcgatcaaggcgagcca
ggtcaaaaaggaaacatagggatctcagtgtctgtaaaaggggatcaaggagagagagga
gagcaaggtccaccaggtattcaaggaccacaaggtgaacaaggaccacctggtacagga
tccgatggcctcaagggagccagaggcgacaaaggtgatgtaggccccaaggggattgaa
ggtgaacaaggaatatccggtaataaaggttctagcggtcctgacggaccccggggacct
cagggtgacgctggatcacgaggcgaaaagggagccacaggtccaccaggtcctgctgga
gtaaaaggaggggatggagagaaaggaaacgagggtgtagctggtgataagggtgatata
ggacctcagggcttaactggacctcaaggtccagagggtcctattggaccaccaggacaa
gacggtcctagaggcgaaaaaggtgatgttggtgtcccaggtattatcggcaaaccagga
caagatggaccccgtggcgatacaggcttaactggtggtaaaggtgatcctggtcctcga
ggtcctagcggtgataaaggtgctcccggagttgcagggcctaccggagataagggacgt
gatggaaatcccggtccccggggtcctgatggtgatagcggggataatggagcgcaaggt
cttaagggtgacaaaggcaaaaaaggagagaaaggaacgggaacaggaatacctggacct
gaaggagcccaaggggaaaaaggcaatcaagggccttctggccaagatggattccctggt
gaccctggtccaaatggtgatcctggccgagctggtgatgtgggtgcacccggaaacgac
ggacctcccggagctgatggttcccaaggccctagaggagacgtcggcccaaatggaatt
agaggagacataggtcccccaggacaaatgggtgaaaaaggaaggcgtggttctccaggc
cagggagattttggttttatgttaacagttcacagccaagctagctctatccctgaatgc
cccagcggtacgacgcgaatgtgggatggttacagtttattgtatatccaaggaaacgaa
cgtgcacatggtcaggatcttggtgaagctggttcctgcatacgaagatttagcactatg
cctttcttgttctgtaatattaacaacgtttgtaatcttgcctcacgaaacgactacagt
tattggttagcaacaactgaaccaattccaatgatgccagccagagaacaagcggttgaa
aaatatatcggacgttgttctgtatgtgaagctccgtctcatgtcattgctgttcatagc
cagtctacgttagatccaaattgtcctgaaggatgggaagctttgtatggtggatacagt
ttccttatgcatatcagctctggatcagaaggtgctggtcaattgctatcctcaccaggc
tcctgtttgaaagacttccgcgccaatcccttcattgaatgtcacgggcgtggcacgtgt
cagttttatgccaatacatactcgtactggatgacgacggttgaagcccagaatcaattc
agaacacaacagccagaaaccctcaaagccaacaatttacgaagccgcattagcaagtgc
acagtttgtatgaaatcaatccccgatgtcggaaatgtcggaaacctttaa
DBGET
integrated database retrieval system
