Dendronephthya gigantea (soft corals): 114528129
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Entry
114528129 CDS
T06112
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04512
ECM-receptor interaction
dgt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114528129
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114528129
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dgt04147
]
114528129
00536 Glycosaminoglycan binding proteins [BR:
dgt00536
]
114528129
Exosome [BR:
dgt04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114528129
Glycosaminoglycan binding proteins [BR:
dgt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114528129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
VWA
VWA_2
Copine
Motif
Other DBs
NCBI-GeneID:
114528129
NCBI-ProteinID:
XP_028405527
LinkDB
All DBs
Position
Unknown
AA seq
1897 aa
AA seq
DB search
MTGVRAFFLVFFVCAMTAKGQEEGSAITPNPRFFSTIPPAPTNEPLPTVPPHTGLTTQAP
KPKSTGCEYGNCQPKGECDCLKGQKGTRGRIGRTGEQGIAGEQGPKGVAGIQGHKGLKGD
AGNPGPRGPDGDRGIEGMVGFDGYDGLPGSHGHRGQKGFPGIPGCKGEPGESGSLIGANG
LDGPPGPDGDPGPKGFPGEPVSGPTPEEKGERGEPGDRGFRGMEGPRGRAGPDGEVGDKG
IVGKQGLEGEQGDKGSPGDSPQVLDKELPKGERGDEGPKGPPGKPKILSQEEAEKHTAIR
GDKGEPGEKGPRGSSERGDKGVRGFQGGKGEVGDQGPIGDAGGDGRKGNIGQPGDQGGNG
MVGEYGDVGPKGFRGPPGQSGAVGRRGDEGPESTINFPGTKGSVGEKGSVGPPGYPGEQG
DPGPQGDPGVPGKPMTGFKGATGDRGLQGAPGETGNSGLIGMDGPKGKPGRDGDPGKKGT
MGDNGEDIPGRNGMDGKKGATGYKGPVGDPGAVGSIGAPGDPKGVDCSDPTNECPKGERG
PPGRPGVSGDTGEDGAQGSPGPKGYKGGNCPECPPGPKGSPGEEGPQGRPGDRGERGKTG
DVGEAGVPGQPGEDGPIGDIGTKGYQGYAGSRGDKGQKGEPAPKDVAVPQGLPGDTGEDG
EEGSKGFKGFNGQKGVRGVQGYAGTRGDTGNTGDGGVPGVNGEKGAPGEEGEKGEKGVSE
RGDKGEVGEPGEQGPVGPKGPPAPGQGTGKNATKPKGIPGPKGIPGKDGINGKDGAKGDK
GDTGDRGAKGARGIKGNGERGDKGMAGEAGMGGLPGRNVQGDMGDTGERGRDGEKGVKGD
IGEPGSDSNEEGTGNLGAQGDPGDPGEAPAGEAGPRGQKGVRGRNACGGVLDVSFIVDSS
GSVADHFGTIQEFVKKFIDGFDISKEKTHASLMTFSNEAKVQFFLTEEFDPEILMWFVDR
AKHDGGQTYIDRALKKANDEVFNHANGWRKNVTSIIIILTDGNQTTSGTFTPLGQASAPL
KNKGIRIVTVGVGDIDAKQMEILSPDSRDRFNPKRFDDLIPLVETMFSSGLCTGINGDRG
PPGPDGNPGADGVPGEDGAPGDPGDSGIPGVRGEDGIDGEDGIKGPTGDQGPPGDPGPKP
DEEGPKGMKGDPGDSPPGPPGDAGPKGEPGEPGMTGDPGPVGPPGEKGDRGEDGLIGPTG
PQGSEGMVGPEGNAGPDGNPGPQGDKGPVGPPGETGEMGTVGPIGPNGERGEEGFGEPGV
PGDIGETGMKGEPGVKGIPGEIGLKGFRGPTGDAGVKGTKGSPGVPGPTGDPSVATSPSP
KGDKGERGEPGIPGDKGSIGDPGVDTSGQSGDEGDKGEQGDQGPPGDTGIPGSDGEAGDE
GIVGPQGPLGEAGAPGLPGEPGGGLPSGGDQGDLGEPGDPGKKGARGPPGLPGNPGPPGI
IGKEGPQNFVVGKKGDDGEAAPDGEPGSDGNPGPPGPPGSVGPRGDDGPQGETGDPGEFG
TQGENGLQGDDGVEGPKGYRGTDGEVGEPGDRGSDGERGESIDIVGPPGPKGKSGERGIK
GNNGANGDAGRKGSDGAAGQKGESGIPGSPGVPGSQGRRGPSGERGDKGQKGQEGERGVE
GIPGEPGFSASASGFYVTRHSQGRAAPPCPAGYKKMWDGFSLLYVQGNDKSHGQDLGQAG
SCLRQFSTMPYLFCNIHKRCNLASRNDYSYWLSASDSIPMMPVDNDAVDPHISRCSVCET
PGPVIAVHSQDQTLPSCPAGWQGVWYGYSFIMHTGAGGSGSGQSLSSAGSCLEVFRPNPF
IECHGRGTCHYFANKYSFWMATVKEEDMFKSQTPEVLAKDKGQDLRSRVSRCRVCVRPPK
TNRQQPHPAFWHDVTDPKTNTGDAANAKPLLRQAGLQ
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgacaggggtgcgagcattctttctcgttttctttgtctgcgcaatgacagcgaagggt
caagaagaaggttcagctattacaccgaaccccagatttttttcgacaataccaccagca
ccgacaaatgagcctctcccaactgtaccaccacatacaggtttaacaacacaagcgcca
aagcctaagagtacgggatgtgaatatggcaattgtcaaccaaaaggggaatgtgactgc
ctcaaaggccaaaaaggaacacgggggcgtatcggtcgcacaggtgaacaagggattgct
ggggaacagggacccaaaggcgtggcaggcatacaagggcataaaggtttgaaaggtgac
gctggaaatccaggtccaagaggacccgatggtgatcggggaatagaaggcatggtcggt
ttcgatggatacgatggcttaccgggttcacatggtcaccgtggtcaaaaaggattccct
gggatccctggttgtaaaggtgaaccaggtgagtctggttcacttattggtgcaaatggt
ttagatggtccacctgggcccgatggtgatccgggtccaaaaggttttccgggtgaaccc
gtatctggtccaacaccggaagaaaaaggcgaaaggggagaaccaggtgatagaggtttc
agaggaatggagggaccaagaggaagggccggtccagacggtgaagtgggtgacaagggt
atcgttggaaaacagggtcttgaaggcgagcaaggtgataaaggttccccaggcgactca
ccccaagtgttagataaagagcttccgaaaggagagcgaggggatgaaggtccaaaagga
cctccaggaaaacctaaaatacttagccaagaagaagcagaaaaacatactgcaatccgt
ggtgataagggtgagcctggcgagaaaggtccaagaggatcttcagaacgaggtgataag
ggtgtacgaggtttccagggaggcaaaggtgaagtcggagatcagggtccaataggagat
gcgggaggagatggcaggaaaggaaacattggtcagccgggtgaccagggtggaaatggc
atggtcggtgaatatggtgatgttggaccaaagggattcaggggacctcctggacagagt
ggagcggtaggaagacgtggggatgaaggaccagaatcaacaattaactttcctggaaca
aaaggctccgttggtgaaaaaggctctgttgggcctccaggctatcctggagaacagggt
gatccgggacctcaaggagatccaggggtacctggcaaaccaatgacgggattcaagggt
gcaactggagatcgcggtttacagggagccccaggcgaaacaggaaattcaggtctaatt
ggtatggacggtcctaaaggaaagcctggtcgtgatggtgatccaggaaaaaaaggaaca
atgggtgataatggtgaagatattcccggacgtaatggcatggatggaaaaaaaggagcc
accggttacaaaggacctgttggtgaccccggtgctgttggttcaataggtgctcctggc
gatccaaagggcgttgactgtagtgaccctactaatgagtgtcctaaaggggaaagggga
ccaccaggacggcctggtgtttcaggtgatacaggtgaagatggtgctcaaggttcccct
ggacccaaaggttacaaaggaggtaactgtcccgaatgtccacctggtccgaaaggttca
cctggtgaagaggggccccagggtagacctggagaccgtggagaacgagggaaaaccgga
gatgttggtgaagcaggcgttcctggtcagcccggtgaagatggacctattggagatatt
ggaacaaagggatatcaaggatatgcaggttcgagaggtgacaagggacaaaaaggagaa
ccagcacccaaagatgtcgccgttcctcaaggacttcctggtgacactggtgaagatgga
gaagaaggctcaaaaggttttaaaggcttcaatggacaaaagggtgtgcgaggtgttcaa
gggtatgccggaacccgaggtgatacagggaataccggtgatggtggtgttcctggagtt
aatggggagaaaggagccccaggcgaagagggggaaaagggtgaaaagggagtatcggaa
cgaggtgataaaggcgaagttggagagccgggtgaacaaggtcctgtgggtcctaaagga
cctccagccccagggcaagggacaggaaagaacgcaacgaaacctaagggaattccagga
ccaaaggggatccccggaaaagatggaataaacggaaaagatggtgcgaaaggagacaaa
ggtgatacgggagaccggggggcaaaaggtgcacgggggataaaaggaaacggagaacgg
ggtgataaaggtatggctggagaagctggaatgggtggattgcctggccggaatgttcag
ggtgacatgggggacactggtgaaagaggaagggacggtgaaaaaggtgttaaaggtgac
attggtgagccaggttctgattcgaatgaagaagggactggtaatcttggggcgcaaggt
gatcctggagatccaggagaggctccagctggtgaagctggtccacgtggacaaaaaggt
gtacgaggaagaaatgcgtgtgggggtgtactggatgtcagttttatcgttgattcatcc
ggtagtgtggctgatcactttggaaccattcaagaattcgtgaagaaatttattgatggg
tttgacatttccaaagaaaaaactcatgcgtctttgatgacattttcaaatgaagcaaaa
gtacagtttttcctcacggaggaatttgatcctgaaattttaatgtggtttgtggaccga
gcgaagcatgatggaggtcaaacgtacattgatcgagctttgaaaaaagcaaatgacgaa
gtttttaatcatgccaacggatggaggaaaaatgtcacttccataattataattctgacg
gacggtaatcaaacaacatccggtaccttcactcccctgggtcaggcatcagctccttta
aagaacaaaggaattcgcatagtaacagtgggtgttggtgacattgatgcaaagcaaatg
gagattctttcccctgattcacgtgaccgcttcaaccccaagaggtttgatgatttgata
ccattggttgaaaccatgttctcaagcggattatgtacaggtattaatggcgacagaggg
ccacccggacccgatggtaatcctggtgcagatggtgtacctggagaagatggggctccc
ggagatcctggtgacagcggaattccaggagttcgtggagaagatggtatagatggagaa
gatgggataaaaggaccgactggtgatcagggccctccaggagaccctggacctaaacct
gatgaagaaggaccaaaaggcatgaagggtgatcctggtgattcacctccaggtcccccg
ggtgatgctggtccaaagggtgaacctggcgagcctggcatgacaggtgatccaggacca
gtgggacctccaggggagaagggggatcgtggtgaagatggacttataggaccgactggg
ccacaagggagtgaaggtatggttggacctgagggcaatgctggtcctgacggaaatcct
ggaccccagggagataaaggacctgtcggacctcctggtgaaactggagaaatgggaaca
gttggacctatagggcctaacggcgaacgtggtgaagaaggatttggtgaacctggggta
cctggtgacattggggaaacaggcatgaaaggagaacctggagttaagggaattcctgga
gaaattggtttgaaaggattccgaggcccaactggggacgctggagttaaaggaaccaaa
ggatcacctggtgtacccgggcccacaggagatccctctgtagcgacaagtccttctcca
aaaggcgataagggtgaacgaggagagccaggaataccaggtgataaagggtcgatagga
gatcctggtgtggatacttctggtcaatcaggggacgaaggagacaagggtgaacaaggc
gaccaaggcccgcctggcgatacaggaataccagggtcagatggggaagctggtgatgaa
ggaattgtcggaccacaaggaccgcttggcgaagctggtgcgcctggcttaccaggagaa
ccaggtggcggtctgccgagtggaggagatcaaggtgatctaggagagcccggtgatcct
ggaaagaaaggagcgcgcggaccacctggattacctggaaatcctggtcctccaggtatc
attggcaaagaaggaccacagaattttgtggtaggtaagaaaggtgacgatggtgaagcg
gcacccgatggtgaacctggtagtgatggtaacccaggacccccaggtccccctggaagt
gttggtccaagaggtgacgatggaccgcagggtgaaacaggggatcctggagagttcgga
acgcaaggagagaacggactacaaggagatgatggtgttgaaggtcctaaaggatatagg
ggtacggatggtgaagttggagaaccaggcgatcgaggtagtgatggtgaaaggggtgaa
tcgatagacattgtaggtcctccgggcccaaagggaaagtcaggtgaacgtggaattaaa
ggaaacaatggtgcaaatggagatgctggtagaaaaggctctgatggtgcagctggtcaa
aagggagaaagtgggataccaggatctccgggcgtacctggatctcaaggacgtcgtggt
ccatcaggtgaacgaggtgataaaggtcaaaaaggtcaagaaggtgaacgtggcgtggaa
ggcatacctggtgaacctggtttctcagctagcgcttctggattttatgttactagacat
agccaaggtcgggctgcgccaccctgtccagctggttataagaaaatgtgggatggtttc
agtttgttgtatgttcaaggtaatgataaatctcatggtcaagatctgggtcaagctggt
tcatgtctacgtcagttctctacgatgccttatttattctgtaatatacacaaacgttgc
aacctcgcgtccagaaatgactacagttactggttgtcagcgtcagatagcatacccatg
atgcctgtcgataacgatgctgtcgatccacatatcagtcgttgttctgtgtgtgaaaca
cctggacccgtcatagctgtgcatagtcaggatcagacattaccatcatgccctgcagga
tggcagggagtgtggtatggatacagttttattatgcataccggtgctgggggaagtggc
agtggtcagagtttgtcatcagcaggctcctgtcttgaggtattccgccccaatccattc
attgaatgtcacggtcgtgggacgtgccattactttgctaataaatacagtttttggatg
gcaactgtaaaagaagaagatatgtttaagtcacagactcctgaagtattagcaaaagac
aaaggacaagatttaagatctcgggttagtcgatgtcgtgtttgcgttcgaccccccaag
acgaaccgtcagcaaccccacccagctttttggcatgatgtcaccgatcctaagacaaat
acaggcgatgctgcaaatgctaagccgttattgagacaagctggactccaataa
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integrated database retrieval system