KEGG   Dendronephthya gigantea (soft corals): 114528289
Entry
114528289         CDS       T06112                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
dgt  Dendronephthya gigantea (soft corals)
Pathway
dgt03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dgt00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    114528289
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dgt03019]
    114528289
   03036 Chromosome and associated proteins [BR:dgt03036]
    114528289
Messenger RNA biogenesis [BR:dgt03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     114528289
Chromosome and associated proteins [BR:dgt03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     114528289
    COMPASS/SET1 complex (yeast)
     114528289
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_Vps41 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD_LRWD1 WD40_RFWD3 MIOS_WD40 Beta-prop_HPS5 PROPPIN Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 114528289
NCBI-ProteinID: XP_028405730
LinkDB
Position
Unknown
AA seq 321 aa
MKLEDKVIRSFRVAKVFRENSDRVNHLDLSANGETLITSSDDDSMVIYDCLEGKPRRTLY
SKKYGVALIQYTHAANTVIHASTKVDDTIRYLSLHDNKFLRYFQGHTKRVVTLCMSPLDD
SFISGSLDKTLRLWDLRSHNCQGLMQVNGRPVAAFDPEGLVFSAGVDSEMIKLYDLRSFD
KGPFSTFHIPGTTAGTEWTNLKFSNDGKMILLSTNAGVIYLIDAFQGSQLHTFTGIGSSP
TSYFEACFSPDSQYVISGSKDGRVHVWAADSGQKVAVLDGNHPGPTHCVKFNPKFMTMTT
ACTNVAFWLPNVEEVEGAKKT
NT seq 966 nt   +upstreamnt  +downstreamnt
atgaagttggaagataaagttattcgttcatttcgtgttgcaaaagtatttcgagaaaat
agtgatcgtgtaaatcacttggatctgtctgctaatggcgagacattgattacaagcagt
gatgatgattcaatggttatatatgattgtctggaaggaaaaccaaggcgtacattatac
agtaagaaatatggtgtggccctaattcaatatacgcatgcagcaaacactgtgatccat
gcttcaaccaaagttgatgacacaatccgttatttgtctcttcatgacaacaaatttctt
agatattttcaagggcatacaaaaagggtcgtgacattgtgtatgtcaccgttggatgat
tctttcatatctggctctttggacaaaactttgcgattatgggatttgcgttctcacaac
tgtcagggtctaatgcaagtgaatggtaggcctgtagcagcctttgatccagaaggtttg
gttttctcagctggagtggatagtgagatgataaaactgtatgacctgagatcttttgac
aagggaccattttcaacattccacattccaggaactactgctggaacagagtggactaat
ttgaaatttagcaatgatggtaaaatgatcttactttcaactaatgctggagttatttat
cttattgatgcttttcaaggctcacaattgcacacattcacgggaattggaagttctcca
acctcatattttgaggcatgtttttcaccagattctcagtatgtaatatcaggttctaaa
gatggtcgtgtacatgtatgggcagctgatagtggacagaaggtagctgtgttagatgga
aatcatccaggacccacacattgtgttaaatttaatccaaagttcatgacaatgacgact
gcttgtacaaatgttgctttttggttaccaaacgtagaggaagttgaaggggcaaagaaa
acgtga

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