Dendronephthya gigantea (soft corals): 114528463
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Entry
114528463 CDS
T06112
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03030
DNA replication
dgt03410
Base excision repair
dgt03420
Nucleotide excision repair
dgt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114528463
03410 Base excision repair
114528463
03420 Nucleotide excision repair
114528463
03430 Mismatch repair
114528463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgt03032
]
114528463
03400 DNA repair and recombination proteins [BR:
dgt03400
]
114528463
DNA replication proteins [BR:
dgt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114528463
DNA repair and recombination proteins [BR:
dgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114528463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_22
PTCB-BRCT
Rad17
AAA_30
AAA_5
AAA_14
AAA_33
RuvB_N
AAA_7
AAA_17
nSTAND3
AAA_16
BRCT_2
RNA_helicase
AAA_18
Motif
Other DBs
NCBI-GeneID:
114528463
NCBI-ProteinID:
XP_028405906
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MDIRRFFCVQTSTKNSDSNAGSSKKSSEKAAGGKSGKSKETAKRRISKSSESEEDRKHKN
KRKKSKVIVETDSEEEPLPTKIRKKDSGRKKNDIRISSDEEDALPQRLQKTAKNEPQKKK
PLSKPKAAEVTPAKRVTTASEYFGAKPIERSSKKTQKRKERPQEVSEECAVVESNNNSEP
TTNHLSHENELPSEKPSKKAKKCLLEDTAERATKVEDKIDFLPKKSPSLTPKKSKSSQNR
KQATSKSETPGKSHNSVSASKEMSKTSNKNKTRKTVTPEKQKAKEMSPKSGNKTTECKQR
TSKKNITPEKVTSAKSKLPVPTADDKKATPNGKIATKKDQVNSTPSKNENKHLSEDVVPS
SLERKASGYRSFMMREGPQALGSKEIPRGSETCLEGKVFVISGILESIEREDAVDLIKRH
GGKVTQAVSKKTSYLVVGRDPGMSKIEKAEKFGTKQIDDDGLFKMIRASQPTATKPDLKE
KQSNFNDESSIDLESSQFTEESESQASVDQTQSHGGHSQSSVFSSSACSTPSTKTPISSP
LPAGKARDSLLWVDKYKPTSIKDIIGQKGDKGNVKKLLRWLQNWRENNQKSTKPKGGYFA
GKEDGSIFKAALLSGPPGVGKTTSAHLVCKEAGFSFVEFNASDSRSKKTLEQQISELLDN
KTMDGYFGAAAGKSSGTKHALVMDEVDGMAGNEDRGGMQELINLIKSTKIPIICMCNDRN
SQKVRSLANYCFDLRFHRPRVDQLKAAMMSIAFKEQLKISPQAMEKIVVGANQDVRQVLY
NLSMWTSKQKSISYDEAKADADRAHKDIKIGPFDVTRKIFSAEESSKMKIQDQFSLFFND
YSLIPLFSQENYLQVVPYRAGGDLKKTLKCVSDAAESYCHSDLVEKSIRSNGSWNLLPLQ
AFFSCVYPGAVMRGRMSQRIDFPCWLGKNSTTTKNSRILQDLVSHAQLSISGSKNELNLE
YIPHLRNVLSRPLINATSEDCSSKVSEVIDVMDSYHFVKDDWDNIMDVGYYDGKRKLQGD
IDSKVKSAFTRTYNKASHLTPYAMNVGAKKTKKSAVDLETEGLGTGDTPEVSDDDSNEEI
DQSFKVKKSGKTGGKKSGNAPAGTSSKQARGKGSGKSRDKTKK
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggatataaggagatttttctgtgtacaaacgtcgacgaagaatagcgactcaaacgcg
ggaagttcaaaaaagagcagcgaaaaagcagcaggtgggaaatctggaaaatcaaaggaa
actgcaaaacggagaatatctaagtcatccgagtctgaagaggacagaaaacacaaaaat
aaacgcaagaaaagtaaagttatcgttgaaacagattctgaggaagaaccattaccaaca
aaaataagaaaaaaggattctggaagaaagaaaaatgatattcgtattagttcagatgaa
gaagatgctcttcctcagagacttcaaaaaactgcaaaaaatgagccacaaaagaagaaa
ccattatccaaaccaaaagctgctgaggtaaccccagccaagagagttacgactgcctcg
gaatactttggtgcaaaaccaatcgaaagaagttcaaaaaagacacagaagagaaaagag
agacctcaggaagtttctgaagaatgtgctgttgttgaaagtaacaacaacagtgaacct
accacaaatcatttatctcatgagaatgaattaccatctgagaaaccatcaaaaaaggca
aagaaatgcttgctcgaagacacagctgaaagggcaacaaaagtggaggataagattgat
tttttaccaaaaaagtccccatcattaactccgaaaaaatcaaaaagctcacaaaacagg
aaacaggcaacttcaaagtctgaaactccaggaaagtctcacaatagtgtgagcgcttca
aaggaaatgagtaaaactagtaataagaacaaaactagaaagactgttactcctgaaaaa
cagaaagcaaaggaaatgtcaccaaaatctggaaacaaaacaactgaatgtaaacagcga
acctcgaagaaaaacattaccccagaaaaggtaacatctgcaaagtcaaagttgcctgtc
ccaaccgcagatgataaaaaagcaacgcctaatggaaaaattgctacaaagaaggatcag
gttaattcaacgccaagcaagaatgaaaacaaacatttgagtgaagatgtcgtcccatcc
tcattggaaagaaaagcctcaggttatcgaagttttatgatgcgtgaaggaccgcaagct
ctgggctccaaagaaattccgaggggcagcgaaacatgtttggaaggcaaggtgtttgtg
atctctggtatactggagagtatcgagagagaagatgcagttgacttgatcaaacgacat
ggtggtaaggtcacccaagctgttagcaagaaaaccagttatcttgtggtcggcagagat
cctggcatgtcgaaaattgagaaggcagaaaagtttggaacaaagcaaattgatgacgat
ggattgtttaaaatgattagagcgtctcaaccgacagccaccaaaccagatttgaaagaa
aaacagagcaattttaatgacgagagttccattgatctcgagtcctctcaatttacggag
gaaagcgaaagtcaggcgtcggtggatcagacccaaagtcatggcgggcacagtcaatca
tccgttttctcatcatctgcttgttcaactccttcaaccaaaacaccgatatcttcccct
cttccagctggtaaggcacgagacagtttgctatgggttgataaatacaaaccaacatca
attaaggatatcattggacaaaaaggggacaaaggaaacgtgaaaaaacttctacgttgg
ctgcaaaactggcgggaaaataatcaaaaatcaacaaaacccaaaggaggatattttgct
ggtaaggaagacggttcgatcttcaaagcagcgttattgtctggtccacctggtgttggt
aagaccacaagcgctcatttagtttgcaaggaggctggcttctcgtttgtcgagttcaac
gcaagtgattctcgcagcaagaaaacattggaacagcagatttctgagttactcgacaac
aaaactatggatggttacttcggcgctgcagcggggaagtcctcaggtacaaaacacgct
ctggttatggacgaggttgatggtatggcgggaaatgaggacagaggaggaatgcaggaa
cttattaacctcattaaatctacaaaaatacccatcatctgcatgtgtaacgatagaaac
agtcagaaagttcgtagcttggctaactactgttttgatcttcgcttccatcgtcccaga
gtggaccagctcaaggcagctatgatgagcattgcattcaaagaacagttgaaaatctcg
cctcaagccatggagaaaatagttgttggagcgaatcaggatgttcgccaggtgttgtac
aacctttcaatgtggacatcaaaacagaaatccatatcatatgacgaggcgaaggctgat
gctgaccgagcccacaaagatattaaaattggaccgtttgatgtcacgaggaaaatcttc
agtgctgaagagagttcaaagatgaaaatccaagatcagttttctttattcttcaacgat
tattcgttgattcctttgttttcgcaagagaattacctccaggttgttccgtatcgcgca
ggaggtgatctgaagaaaaccttgaagtgtgtcagcgatgcagcggagtcgtattgtcac
tctgatcttgttgagaaatctattcgtagtaatggcagttggaacttactaccattacag
gctttcttctcgtgtgtttaccctggcgcggttatgaggggaagaatgagtcaaagaatt
gattttccttgctggcttggaaagaattcaacgactacaaagaattcacgaatcctccaa
gatctcgtaagccatgctcaactcagcatttctggcagtaaaaatgagttaaacttggag
tatattccgcatctccggaatgttctcagcagaccattaataaacgcgacctcggaggat
tgctcatcaaaagtttcagaagtgattgatgtgatggatagttatcactttgtgaaagac
gattgggataacatcatggatgttgggtattatgatggaaagcgaaaacttcagggagat
attgattcgaaggtaaaatcggcattcactcgcacatacaacaaagcgtctcatttaacg
ccttacgccatgaatgttggcgcgaaaaaaaccaaaaagagcgcggtggatctggagaca
gaggggctgggtactggagatacgccagaggtcagcgatgacgacagtaatgaggaaatt
gaccagagttttaaagtgaaaaagagcgggaaaactggaggtaaaaaatcgggcaatgcg
cccgcaggaactagcagtaaacaggcccgaggaaaagggagcggaaaaagtcgagataaa
acgaaaaaataa
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