Dendronephthya gigantea (soft corals): 114530252 Help Entry 114530252         CDS       T06112                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism dgt  Dendronephthya gigantea (soft corals) Pathway dgt04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:dgt00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     114530252  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:dgt00536]     114530252 Glycosaminoglycan binding proteins [BR:dgt00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    114530252 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  114530252 NCBI-ProteinID:  XP_028407646 LinkDB All DBs Position Unknown AA seq 1626 aa AA seqDB search MLLHVLVLSACLIGGTFSRNLPEGSADLVEKLGLRDQTKGVKKVSKFCHDAAYEIDENAK LMMDTNRLFPKGLNLASFAIVMTVKMKTGTKGHIFTMYSEDSTPVLAIQANPLKIEHKNG VIDLNVEEYIKDEMWHTIAIAVDETSIEILVDCESVNYLRGPRKELVNEVISGGQTLLGQ RFTGDSFLGSVEEVTIIPGQPGKAVGYCNDVQACKNKVTMKDRAPEPVEVTPQVATDDVQ AVTVIPDEYVVFDGNTYYIRGDKGSPGSPGARGAPGKSGAGGTQGPPGPPGSPGNPGRDG PAGEPGPPGAPGPSIDIDMGRLAGAWRGSGGDGKGPSPSSIRDIFSNLPSGPGPRGPPGR PGKPGSQGYSGPPGPPGPPGANGEMGPPGTNGPRGPSGRPGPPGKRGNDGPPGPQGPPGA KGVRGYDGMQGMPGPKGHKGDMGPQGASGEKGEQGERGDNGEQGPRGAPGERGNPGEPGM RGPPGLRGQTGPVGERGSAGPRGPQGDPGVNGNPGSTGIRGPPGPPGPQGSTGASGDKGE QGKPGMPGFPGTDGSPGLPGAEGPAGPKGDTGPPGQAGPSGYPGPRGVKGATGTRGSPGT KGEPGEPGIAGEKGDQGAKGDQGAAGNPGMPGPDGAEGKKGIQGVSGPPGPPGSPGSKGD RGERGLPGYTGPPGLKGSNGARGYPGRRGEKGSRGSSGPAGQPGARGRRGPAGERGAPGS PGSSGAKGSAGQTGAPGERGAPGAPGPQGPRGLPGSDGSPGAQGKTGPAGLPGPRGEPGN PGKPGNQGPSGLPGPRGPQGEKGPQGEPGQQGRNGAPGQPGAPGEKGNAGAKGDRGATGE QGPAGSAGSPGAVGPKGSRGLPGAPGEKGNEGPAGVTGPTGPPGAPGAAGQPGSAGSPGR PGPQGATGPSGEKGDTGPEGEQGDPGADGKPGVPGQAGPQGPTGPPGQEGEKGNQGNSGE SGKPGDPGAPGSQGPPGPQGSQGQMGPPGPPGERGQQGQTGPRGEKGADGPRGLQGPTGN TGMPGAPGQAGPKGDRGDPGRQGPQGGIGARGEPGMAGDKGEQGATGPPGPSGRTGQKGD RGEKGDQGPVGPQGSQGLPGNPGSKGEAGQAGVQGASGGVGAPGSPGAKGESGPPGPLGP PGGPGPVGPKGEPGNDGSDGSKGEQGPVGPPGQPGDDGPPGPQGNPGRPGPKGSAGEQGL SGEKGDQGRQGPAGENGRAGPAGPPGPQGAQGERGQRGQTGAQGRPGTAGQPGARGPVGA TGEPGPAGAAGRDGAKGDSGFFGPPGPQGPAGEKGDEGERGSPGPFGPKGDVGPNGNRGP SGPPGPPGPPGATGPTGPKGESGPMGPGGDLGPPGPPGPPGPPGTAGYSPQSGVGYQPET GTYKGRGKRAVDDSNNAFFAGAEEMAASIESIKKEIEEIRRPSGTQANPARSCKDLYLCN KGNNDGMYWIDPNQGCPDDAIEVYCNFEAEGETCVYPDKDSKKVDKKTWTRDSTEDVYFS ELNGGKAISYNDVGKVQLTFLRLLSESGKQNFTVSCKNFIAWFDESNNNYDKSMILQGDN EQEFSFESNKSKLKIIRDGCKEKGDDKTVFEIETDKLNQLPIVDFAPRDWTENAEFGFEA GPLCFR NT seq 4881 nt NT seq  +upstreamnt  +downstreamnt atgttgcttcatgtgctggtcttatcagcgtgccttatcggcggtacattcagtcggaat ttaccagagggttcagccgacttagtagagaaactaggacttcgtgatcaaaccaaaggt gtgaaaaaagtgagcaaattctgccacgatgccgcgtacgagattgacgagaatgcaaaa cttatgatggacacaaatcgactgttccctaagggtttaaacttagccagtttcgccatc gtgatgacagtgaaaatgaaaacaggcacaaagggtcatattttcaccatgtactcggaa gatagtacgcccgtacttgccattcaagctaacccgcttaagattgagcacaagaatggt gttattgacttgaacgttgaggaatacatcaaggatgaaatgtggcataccatagccatt gctgtcgatgaaacctcgattgaaattttggtagattgtgagagtgtcaactacctcagg ggaccacgcaaggaattagttaatgaggttatcagtggtggtcagacattgctgggacaa cgtttcaccggagatagctttctgggctccgttgaggaggtgacaatcattccaggacag cctggcaaagctgtgggatactgcaacgacgtccaggcttgcaaaaacaaagtaacaatg aaagatcgtgcaccagagcccgtcgaggttacacctcaagttgcaactgatgatgtccaa gcagttaccgttatcccagatgaatatgttgtattcgatggaaatacgtattatatcaga ggtgataaaggttctccgggatccccgggagcacgtggtgcgccaggaaaatctggagca gggggaacacaaggcccacctggacctcctggttcaccgggtaacccaggtcgagatggc cctgcaggtgaacctggcccaccaggtgccccaggcccaagcattgacattgacatgggt agactagctggtgcatggcgtggatctggcggcgatggaaaaggaccatcaccatcatca atcagggatattttcagtaacctaccatctggtccaggcccaagagggccccccggtaga cctggtaaacctggttctcagggttattcaggaccccctggcccacctggcccaccaggt gcaaatggagaaatgggaccaccaggaacaaacggaccccgaggtccatctggcagacct ggtccccctggaaagcgcggtaatgatggccctcctggaccccaaggtccccctggagca aagggtgttcgaggttacgatggaatgcaaggaatgccgggtccaaaaggacacaaaggt gacatgggaccacagggagcctcaggagagaagggagaacaaggcgaacggggtgacaac ggagaacaaggaccacggggagcgccgggagaacggggaaacccaggtgaacctggaatg cgaggtcccccaggtcttcgtggacagactggaccagtcggagagagaggaagcgcagga ccacgtggaccacagggtgatcctggtgtgaatggtaatcctggaagcactggtatccga ggacctccaggaccaccgggacctcaaggatcaaccggggcatcaggagataagggcgaa caaggcaaaccgggtatgccaggcttcccaggaacggacggttcccctggtcttcccgga gctgaaggtccagccggtccaaaaggagatacaggtccacctggtcaagcaggtccttct ggctatcctggcccacgtggcgtgaagggagcaactggaacccgaggatccccaggaacc aaaggagaaccgggtgaaccaggtattgctggagagaaaggcgatcaaggtgcaaagggt gatcagggagcagcaggaaacccaggaatgcctggcccagatggtgctgaaggaaagaag ggtattcaaggtgtttctggaccaccgggcccaccaggttctcctggatcaaagggtgat cgtggtgaaaggggattgcctggttataccggaccacctggactaaagggttcaaatgga gcacgaggttatcccggaagacggggcgagaagggttcaaggggaagcagtggtccagct ggacagcccggtgcaagaggacgacgaggtcccgcaggagaacgaggagcccctggatct ccaggatcatctggtgctaagggatcagccggacaaacaggagcaccaggagaacgtgga gcacctggagcaccaggaccacaaggtccacgaggattgcctggatcagatggaagcccg ggagcacaaggaaaaactggacccgctggattgcctggacctcgtggtgaacccggtaac cctggaaaacctggtaaccaaggaccaagtggacttcctggtccaaggggacctcaaggt gagaaaggaccacaaggtgaacccggacaacagggaagaaatggagcaccaggtcaacca ggtgcgccaggagagaagggaaacgccggagcaaagggtgaccgtggagctactggagaa caaggacccgctgggagtgctgggtcacctggcgctgtaggacccaagggttctagagga ttaccaggtgcgcctggtgaaaaaggaaatgaaggaccagctggagtaacaggcccaaca ggaccaccaggagcccccggggctgcaggacaacctggaagcgcaggctcacctggacgt ccaggtccacagggagccaccggtccaagtggcgagaaaggagatacaggacccgaaggt gaacaaggtgatcctggagctgatggaaaaccaggcgtacctggtcaagctggaccacaa ggacccacaggtccccctggacaggaaggcgaaaagggtaaccaaggcaactcaggtgaa tctggaaaaccaggcgatccaggcgccccaggatcacaaggacccccaggacctcaagga tcacagggacaaatgggaccacccggacctccaggtgaacgtggtcaacagggacagact ggaccaagaggagagaaaggtgctgatggcccacgaggtttacaaggacctaccggaaat actggcatgccgggggcaccaggtcaagccggaccaaaaggtgatcgtggcgatcctgga agacagggtccacaaggtggaatcggagcaagaggagaaccaggaatggccggtgataag ggtgaacaaggagcaactggacccccgggaccatctgggcgtactggacaaaagggcgat cgaggagaaaagggtgatcaaggaccagttggtccccaaggttctcagggtctcccaggt aatcctggtagtaagggtgaagctggacaagctggtgtgcagggtgcatccggtggagtc ggcgctccgggaagtcctggtgcaaagggtgaatctggtccacctggacctcttggacca cctggcggacctggcccagtaggacctaagggcgagcctggtaatgatggaagcgatgga tcgaaaggtgaacaagggcctgtgggtccacctgggcaacctggcgatgatggtccacct ggcccacaaggcaaccctggtagaccaggccccaaaggcagcgctggagaacaaggcttg tcaggagagaagggtgatcaaggacgacaaggacctgctggtgaaaatggacgcgctgga ccagcgggtccaccaggtccacagggagcccaaggagaacgaggccaacggggacaaacg ggtgcacaaggtcgtcctggaaccgcaggtcaacccggagctcgcggacctgtgggtgct actggtgaacctggcccagctggtgctgctggtcgtgatggtgcaaagggagattcaggt ttcttcggaccaccaggcccacagggacctgcaggagaaaaaggtgacgagggtgaacga ggatccccaggaccatttggaccaaagggtgatgtcggaccaaacggtaaccgaggcccc tctggacctccaggtccacctggacctccgggtgctactggaccaactggacctaaaggt gaatcgggcccaatgggaccaggtggcgatctaggaccaccgggaccaccaggacctcca ggacctccgggaacagctggttattctccacaaagcggtgtaggctaccaaccagaaaca ggcacatacaaaggccgtggaaagagagctgtcgatgattcgaacaatgcattctttgct ggagccgaagagatggccgcgtctatcgaatcgatcaagaaagaaattgaagaaatccga cgaccaagtggaacacaagccaacccagcacgcagctgcaaagatctctatctatgcaat aagggcaacaacgatggcatgtattggattgatcctaaccaaggatgtccagatgacgcc attgaagtatattgtaacttcgaggctgaaggagaaacctgcgtgtaccccgataaagac agtaaaaaggttgacaaaaagacgtggaccagagattcaacagaagatgtttacttcagc gaacttaacggcggcaaggctatctcgtacaacgatgttggcaaagttcaacttacattc ttgcgtcttttgagcgagagtggcaaacagaacttcaccgtgtcgtgtaagaacttcatt gcttggttcgacgagagcaataacaattatgataaatctatgatcttgcaaggagacaac gaacaagaattttcatttgaatcaaataagagcaaattaaagataattcgagatggctgt aaggaaaaaggcgacgataaaacagtattcgagatcgagacggacaaactcaaccagcta ccaattgtcgacttcgcgccaagggattggaccgaaaacgcggagtttggcttcgaggct ggtccgctatgcttcagatag

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