Dendronephthya gigantea (soft corals): 114531755
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Entry
114531755 CDS
T06112
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114531755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114531755
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114531755
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114531755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
114531755
NCBI-ProteinID:
XP_028409175
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MNLIGTLKTNNIGFYTENSLHDTNNSSNMFFNQSPFPRRPEKEPLPSHSTSQPVSHLNNL
YSAPAVSAPGSQQNYFGSGLGSPGGLTPTSAVPGAPGSSRGLTGSPQFSRSISYPGYHGQ
LSNASSGLQHLNSVSSTVSSTQPGSRGILSMGQRSSGVSLPPAGNSHIGAQAAFNSLGSK
PSSRAPGLPVSTIGRSSPGTIAQQQQQQQRSFLGSSGHGGLVNSTGNSLASAFGPPRSQQ
NVFGLPASSMMSAFSSPGLGNADTISSVAAINSGLDLSDFPVLANRPMSHIPPSVSSPSS
TATSSSFVGRASYGLVSKRGEPTTEFTMLNEDFPALPGTIIKSEVSGESANQENKPAIQR
FGNSSSYEQAVKDEMRTASQSQNTQPIKGKIQTSPTGTITNIPKHMVTDQFGMIGLLTFI
RAAETEPNLVTLALGSDLTTLGLNLNSPESLYQTFGSPFSDSPCRPHEIDFNVPPEYRIN
SYIREKLAPFKLVRYGEDVLFYLYYTNEGDVLQLAAAAELYSRDWRYHKDERVWLTRVPG
VEPLQKTEAYERGTYYIFDYMNWRKIAKEFHLEYKKLEEKPALQPLATQ
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaattggaacattgaaaacaaacaacattggattctatacagaaaattctcta
catgatacaaacaattcatcaaatatgtttttcaatcagtcaccgtttcctcgaaggcct
gagaaagagccattgccatctcattcaacaagtcagccagtctcacatctaaacaacctt
tattcagctcctgcagtttcagcacctggttcacagcaaaattattttggatctggtctt
ggaagcccaggtggtttaactccaacatctgcagttcctggtgcaccaggcagtagccga
ggtctcacaggatctccacaatttagtaggagtatttcttatcctggttaccatggtcaa
ctgtcaaatgccagttcaggattgcaacatttaaatagtgttagttcaacagtctcatca
actcaacctggcagtagaggcattctatcaatgggtcaacgtagttcaggtgtaagccta
ccaccagctggaaactcgcatattggtgcccaggcagcattcaattcccttggctccaaa
ccttctagtcgagcacctggtttgcctgtctccactatcggaagaagttctcctggtaca
atagctcaacaacaacaacaacaacagcggtcatttcttggcagttcgggacacggtggt
ttggtcaactccacgggtaattcgctagcaagtgcgtttggtcctccaagatctcaacaa
aatgtttttggcctgccggcatcgtcaatgatgagtgcattctcctcgcctggtctaggt
aacgcggatacaatctcgtcagtagcagctatcaacagtggtttagatctctcagacttc
cctgtcctggccaaccgtcctatgtcacacattcctcccagtgtatcgtcgccatcttca
acagcaacttccagttcgtttgttggtcgtgctagttacggtttagtgtcaaagcgaggc
gagcctacgacagagttcacaatgcttaatgaagactttccggctttaccaggaaccata
attaaatcagaagtctcgggcgagtctgcaaatcaagagaataaaccagcaattcaaaga
tttgggaacagttcctcttatgagcaagcggtgaaagatgagatgagaacggccagtcaa
tcgcaaaatactcaaccaattaaaggaaaaatccaaacgtcgcctaccggcacgatcact
aatattcccaaacacatggtcacggatcagtttggaatgatcggattattaacattcatc
agagcagcggaaacggagccaaatttagtcacccttgctcttggaagcgaccttacgaca
cttggtctcaatctcaattcacctgagagtctctatcagacatttggctctcctttctca
gactctccttgtagaccacatgagatagatttcaacgttcctccagagtacaggataaat
tcctacatcagagagaagttggctccgtttaaacttgtccgttatggagaagatgtgttg
ttttatttgtattacacgaacgagggagatgtacttcaactagcagctgcggcagaacta
tactcacgtgactggcgctatcacaaggatgagcgagtgtggttaacccgagttcctggt
gtcgagcctttacaaaagactgaagcttacgaaaggggaacttactatatatttgattac
atgaactggagaaagattgcaaaggagtttcatttggagtataagaaactcgaggagaaa
ccagcattacagcctttagctacgcagtga
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