Dendronephthya gigantea (soft corals): 114532013
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Entry
114532013 CDS
T06112
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04150
mTOR signaling pathway
dgt04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
114532013
04150 mTOR signaling pathway
114532013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dgt04131
]
114532013
Membrane trafficking [BR:
dgt04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
114532013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
DUF5050
SGL
Vgb_lyase
EGF_LRP2
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
114532013
NCBI-ProteinID:
XP_028409412
LinkDB
All DBs
Position
Unknown
AA seq
1645 aa
AA seq
DB search
MKLFAFIALLLFGLNGVFVEPLRLLYSERRNIRLLHVEGDLRGQNNLTTTVLADNLQDAI
AVAFHYKDQILFWTDVSLGKILRKSLKGDGRIETVVSVDLVRPEGIAIDWVTKKIYWTDS
HSKLIEVVNLDGTQRSVLFWNNLDQPRAIVVDPIHGYMFWSDWGEKPRIVRASMDGLGRR
DLITEDIKWPNGLAVDYKDPRLFWLDAHKDFSRLESSNLDGKNRKKLIGSSLPHPFSITI
YRDRVYWTDWERMSIESCNKKTGHEKWLVKDKIKHLMDLRAFEAERQPSVPNPCAENNGG
CSHLCLLAAGGNYSCACPTGIVLLDNNKTCEDGPQNFVIVARTTELRLISLDTLDHTAIA
LPIHNMRHVIVIEFDPVERFVYWTDQQLHLIKRAKLNGSEEQTVVQAEVKFPEGIAVDWI
GRNLYWSDTGTDRXEVSHLNGSSRRVLVSEKLDEPRAIVVDPGEGYMYWSDWGSRPKLER
AWLDGTHREVLVNTSIEWPNGLALDYLERRVYWADAKLDKIEVCNLNGSGRRVVLDTDVP
HIYGFGLIGKHLYWTDWQRRNLQKINVDSSHSKDIIVELLPAVMGLKVVDMKLKYGGNDC
QKNNGNCSHLCLYTPIGVQCECPMGLELTKDNKTCVVPEAFLLFSRLKSIRRISIDTTNG
DKPIPIPGIIDANAVDFHINYSRIFWTDMESNKINRAFLNGSQSEVVVDVGISYPDGLAV
DWVADNIYWTDTFFARIECARLDGAHRKTLIWKNLTEPHSLALDPGNGHMYWTEWLQSSS
AAAILRANMDGSNMTILITNRTDMARPKALVIDFFENMIYWTEEHHNHILRARIDGSGLE
KVVHHYLPHPNCLTQYKDFIYWGDQQEGTITRASKYNGGNRTTIEGNVEYIMDMKVFHDS
RQVGWNDCGNENGGCSHLCLAVSNGKYTCACPNHYTLDEKNKKTCISPQLFLLYSDGNTI
RRQTIDHVDNFDVYLPLNIQHKVRALEYDPRTDMVYWISVYDDHASIYRSSPNGSHAEKI
PTSSNDEVLTSPLDIALDPYGKQLYWTDDISKSIKVTSLTSGAIGTIVDDEESNPKSIAL
DPKRGYMYWTNFTDKTASIERARIDGVRDPDKPLYIKDRNKVQLEALVVDPNGEYLFFVE
EIKQKFIRLSLKDLTEEELDVSNLIKVHSLAVYANFLYWVDSGSGKLKRVNKMTGQDQEL
IQGGIKEPVDVMVVDKYSFDDNHPCLKSKSVCSNLCFASQDKPVCSCPKYLVLGENKRTC
QFPPTCGPNQFSCKNGECVHMAWRCDGAHECEDQSDEMNCPPCKKDEFQCKNKQCVPLKN
RCDGAPRCNDESDSCGLNCAEGSFVCSDGKCLPPTWKCDGLEDCSDGKDEDAKACANANN
GASNNGTRLPTQSRDMSGSSHRDKIVIVFTCVAAIIFVLIILFFLKRAKLKQENPYMPPL
VQTTTCHESSYNGDSDGTHCYSKRLNVTVNASISLTSNPTDTGDTFYNRDNLTGQSQSAI
GQTYQHSLSNPPPSPVTDRSHFTSVSGKYYNTPSPSTCELHMYHRPSMPNYTTPATTDVE
SSVSKYINYERKQTSSAYSSVSDEDFELEEDLYAPPPTICTNYFSEGLHFSDDGGPPPSP
SSEVGFIHEPDPPPPSPVTDSPSMA
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctttgcttttatagctttacttctatttggtctaaatggagtttttgttgaa
ccgctcaggcttttatactcggagagacggaacattcgtttgctgcatgtggaaggagat
ctacgtggtcaaaacaatttaactaccacagtacttgcagataacttacaggatgctata
gccgtcgcatttcattataaagatcaaattttattctggactgatgtctccctcggaaaa
atattacggaaatctttaaagggagacggtcgcattgaaactgtcgtctccgttgattta
gtaagacccgaaggaattgcaattgattgggtcacaaagaaaatttattggactgactcg
cactcgaaattaatcgaagttgtgaatttggatggaacgcaacgttctgtgctattttgg
aacaacttagaccaaccaagggcgattgttgttgatcccatccatgggtacatgttttgg
tctgattggggtgagaaacccagaattgtgcgagcgtcaatggatggtttaggccgaagg
gatctgatcactgaggacatcaagtggccgaatggtttagctgttgattacaaagaccct
agattattttggcttgatgcccacaaggacttcagtcgacttgaaagctcaaatcttgat
ggaaagaatagaaagaaattaattggcagttctttgccacatccattttcaattactata
tatcgtgatagagtatattggacagactgggagagaatgtccattgaatcttgcaacaaa
aaaaccgggcatgaaaagtggcttgttaaagataaaataaaacatttaatggatcttcga
gcttttgaagctgaaagacaaccaagcgtaccaaacccatgtgctgagaataatggtggt
tgtagtcacttgtgtttactggctgcaggtgggaattattcctgcgcatgtccaactggg
attgttctcttggataataataaaacatgtgaagatggaccacaaaattttgtgattgtt
gccagaacgacggaattaagattgatctcactagatacactggatcacaccgcaatagca
ctgcctatccataatatgcgccatgttattgtcattgagtttgatccagtagagagattt
gtttactggactgatcaacagttacatctcatcaagagggctaaactcaatggctcagaa
gaacaaaccgtcgttcaagcagaggtgaaattcccagaaggaattgctgtggactggatt
ggccgtaatctttactggagtgacactggtactgaccgtnatgaagttagtcatttgaat
ggttcttcaaggagagtccttgtgtctgaaaaacttgatgaacctcgagccattgtcgtc
gatccaggagaaggctacatgtactggtcagactggggatctcgtcctaaactggaacgt
gcatggctcgatggtactcatcgtgaggtccttgtcaatacttccattgagtggcctaat
ggtcttgctctggactacttggaacgtagagtatactgggcggatgctaaacttgataaa
attgaagtttgtaatttaaatggtagtggcaggcgtgtggtactggatacagatgtgccc
catatttatggctttggtttgattggcaagcatctttactggactgattggcaaagacgt
aatcttcagaagattaatgttgatagctcacatagcaaggacattattgtcgagttatta
ccagctgtaatgggtctaaaggttgtggatatgaaactcaaatatggaggtaatgattgc
cagaagaataatggaaattgttctcatttgtgtctctacacgccgattggagtccaatgt
gaatgtcccatgggattagaacttactaaagataataagacatgcgttgttccggaagcg
ttccttctattttctcgcctgaaaagtattcgtcgcatatcaattgacacgaccaatggc
gacaaaccaatacccatacctggcattattgacgcgaatgcggtcgattttcacatcaac
tacagcaggatattctggaccgacatggaatcaaataaaataaatcgagcatttttaaat
ggcagtcaatcggaggtggttgtggatgttggcatatcatatcccgatggtttagctgtt
gattgggtggcagacaacatctactggacggatacgttctttgcgcgaatcgaatgcgcg
cgactagatggagcgcacagaaaaacattgatttggaagaatttgactgaaccgcattcg
ttagcgttagaccctggcaatggacacatgtattggacagaatggctacagtcatcttct
gcggctgccatacttcgtgcaaatatggatggaagtaatatgactatccttatcaccaat
cgtactgacatggctcggccgaaagcgttggtcatcgatttctttgagaatatgatttat
tggacagaagaacatcacaatcatattttacgggcaagaattgatggttctggtcttgag
aaggttgttcatcattatcttccgcatcccaactgtttaacacaatataaagacttcatt
tactggggagaccaacaggaaggcaccattaccagagctagtaaatataacggcggaaac
cgaactaccatcgagggtaatgtagagtacataatggatatgaaggtatttcatgatagt
cggcaggttggttggaatgattgtggaaatgaaaatggcggatgtagccatctttgtttg
gctgtatcaaatggaaaatacacctgcgcatgcccaaaccattacacattggatgaaaag
aacaaaaaaacgtgtatcagtcctcagctttttctactctacagcgatggtaatacaata
cgcagacaaactatagatcacgtcgacaattttgacgtttacctcccgttaaatatacaa
cataaagtacgtgcgttggagtacgacccaaggactgacatggtatactggatatcagta
tatgatgatcacgcgtcaatttacagaagttctccaaatggttcacatgcagagaaaatt
cccacctcgagtaatgacgaagtattgacttcgccactggacattgctttagatccgtat
ggtaaacagttgtactggacggatgatatttcgaaatcaatcaaagtcaccagtctaacg
agtggtgccattggtacaatagtagacgatgaagaaagtaatccaaagtctattgccttg
gatccgaaaagaggatatatgtattggacaaacttcacagataaaacagcaagcatcgag
agagcaagaatagacggtgttcgagatcctgacaagcctctttatattaaagatcgtaac
aaagttcaacttgaagctctggttgttgatcctaatggggagtatcttttttttgtcgaa
gagataaaacagaagttcatcagactttctttgaaagatttaacggaagaagagcttgac
gtgagcaatctaataaaagtgcacagtcttgcggtgtatgcaaatttcttatactgggtg
gattcaggttctggtaaactgaaacgtgtgaataagatgactggtcaagatcaagaactt
attcaaggcggcattaaggaacctgttgatgttatggttgttgataaatattcgttcgat
gacaatcatccatgtttgaagagcaagagtgtttgcagtaatctttgttttgcaagtcaa
gataaacctgtctgttcttgtccgaagtatttagtgctcggagaaaacaaacgaacatgc
caatttcccccaacgtgtggtccaaatcagttcagttgtaagaatggtgagtgtgtacat
atggcgtggagatgtgatggtgcacatgagtgcgaggaccaatctgatgagatgaattgt
cctccatgtaaaaaagatgaatttcagtgtaaaaataaacaatgtgtcccattaaaaaac
cgatgtgatggcgcaccaagatgtaacgatgaatctgattcgtgcggcttgaactgtgcg
gaaggtagctttgtctgttccgacgggaaatgtcttcctcctacgtggaaatgcgatggt
ttggaagattgctctgatggcaaggatgaagatgctaaagcatgtgctaatgccaacaat
ggagccagtaacaatggcaccaggcttcctacacagagtagagatatgagtggatcttct
catcgtgataagattgtgatcgtgttcacttgtgtcgccgccattatcttcgttttgata
atattgtttttcttaaaacgagccaaactaaagcaggaaaacccgtatatgccaccgcta
gtccaaacaacaacctgtcatgagtcatcgtataacggagattctgatggcactcattgt
tactcaaaaagattaaatgttacagttaacgcttcgatatctttgaccagtaaccccacg
gacaccggagataccttctataaccgtgataatcttactggtcaatctcagtcggcaatt
ggtcaaacttaccagcattcactttcaaatcctccaccatcaccagtgacagatcgttca
catttcacatctgtctcagggaagtactacaatactccttcaccgtcaacatgtgaacta
cacatgtatcatagaccttctatgccgaactataccacaccagcaacgacagatgttgaa
tcatctgtttcaaaatatatcaattatgaacgtaaacagacctctagtgcatattcgtca
gtctctgatgaagactttgaactcgaagaggatctttatgctcctcctcccactatatgc
acgaactatttctcagaggggttacacttctcggatgatggaggtcccccaccatccccg
agcagtgaggtggggttcatacatgaaccggatcctccaccgccatcacccgttacagat
agtccctcaatggcgtag
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integrated database retrieval system
